# HG changeset patch
# User bornea
# Date 1508355252 14400
# Node ID 4324d3f925feeab277d10ad2bfc3a933eaa72d70
Uploaded
diff -r 000000000000 -r 4324d3f925fe plotForce.py
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/plotForce.py Wed Oct 18 15:34:12 2017 -0400
@@ -0,0 +1,409 @@
+import sys
+def readTab(infile): # read in txt file
+ with open(infile, 'r') as input_file:
+ # read in tab-delim text
+ output = []
+ for input_line in input_file:
+ input_line = input_line.strip()
+ temp = input_line.split('\t')
+ output.append(temp)
+ return output
+def network2JSON(nodes_att_file, edge_file):
+ nodes = readTab(nodes_att_file)
+ edges = readTab(edge_file)
+
+ start = """{"nodes": ["""
+ node_numbers = {}
+ cnt=0
+ for i in nodes[1:]:
+ node_numbers[i[0]] = cnt
+ cnt+=1
+ start = start + '{"id":'+'"'+i[0]+'", "size":'+str(float(i[2])*1)+', "score":'+i[1]+',"type":"circle"},'
+ start = start[:-1]
+ start = start+"""], "links": ["""
+ for i in edges:
+ start = start + """{"source":"""+str(node_numbers[i[0]])+""","target":"""+str(node_numbers[i[1]])+"""},"""
+ start = start[:-1]
+ start = start + """]}"""
+ return start
+
+
+output = """
+
+
+
+
+"""
+
+with open(sys.argv[3],"w") as x:
+ x.write(output)