Mercurial > repos > bornea > query_crapome

comparison CRAPomeQuery.xml @ 7:9c72c51d858d draft

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author bornea
date Mon, 18 Apr 2016 12:21:20 -0400
parents 7a0b06a1cabd
children becf7fd6d908
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6:fccd12a1ffe8 7:9c72c51d858d
38 Query CRAPome 38 Query CRAPome
39 ------------- 39 -------------
40 This program will read in a SAINT formatted *Prey* file or a single column list (no column name) of Uniprot accessions (e.g. "P00533" or "EGFR_HUMAN"), query the CRAPome database (v1.1) http://crapome.org, and return a file specifying the prevalence of each protein in the CRAPome. 40 This program will read in a SAINT formatted *Prey* file or a single column list (no column name) of Uniprot accessions (e.g. "P00533" or "EGFR_HUMAN"), query the CRAPome database (v1.1) http://crapome.org, and return a file specifying the prevalence of each protein in the CRAPome.
41 41
42 **1) Input File** 42 **1) Input File**
43
43 SAINT formatted *Prey* file or a single column list (no column name) of Uniprot accessions. 44 SAINT formatted *Prey* file or a single column list (no column name) of Uniprot accessions.
44 45
45 **2) Species** 46 **2) Species**
47
46 Please specify species. Supported species are Human and Yeast. 48 Please specify species. Supported species are Human and Yeast.
47 </help> 49 </help>
48 </tool> 50 </tool>