Mercurial > repos > bornea > query_crapome

comparison CRAPomeQuery.py @ 3:d1a26feef9de draft

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Uploaded
author bornea
date Mon, 18 Apr 2016 12:18:24 -0400
parents 4d47d78b193a
children 6fe48eb42c55
comparison
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2:1c9b793eb6c4 3:d1a26feef9de
31 import numpy 31 import numpy
32 import os 32 import os
33 ################################################################################ 33 ################################################################################
34 ## Global Variables ## 34 ## Global Variables ##
35 if species == "HUMAN": 35 if species == "HUMAN":
36 database = "Human_CRAPome_v1-1.txt" 36 database = str(db_path) + "Human_CRAPome_v1-1.txt"
37 if species == "YEAST": 37 if species == "YEAST":
38 database = "Yeast_CRAPome_v1-1.txt" 38 database = str(db_path) + "Yeast_CRAPome_v1-1.txt"
39 ################################################################################ 39 ################################################################################
40 ## CRAPomeQuery ## 40 ## CRAPomeQuery ##
41 class ReturnValue1(object): 41 class ReturnValue1(object):
42 def __init__(self, uniprot_acc, gene, swissprot): 42 def __init__(self, uniprot_acc, gene, swissprot):
43 self.up = uniprot_acc 43 self.up = uniprot_acc