Mercurial > repos > bornea > saint_bubblebeam
changeset 29:f7b1fe03fb5b draft default tip
Uploaded
author | bornea |
---|---|
date | Fri, 29 Jan 2016 09:39:22 -0500 (2016-01-29) |
parents | 24d4f1350c83 |
children | |
files | Bubblebeam_For_SAINT_wrapper.py |
diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
line wrap: on
line diff
--- a/Bubblebeam_For_SAINT_wrapper.py Fri Jan 29 09:37:09 2016 -0500 +++ b/Bubblebeam_For_SAINT_wrapper.py Fri Jan 29 09:39:22 2016 -0500 @@ -58,9 +58,9 @@ elif label == "true": label = "TRUE" -cmd = r"Rscript "+ str(ins_path) + r"/bubbles_v9_NSAF_natural_log.R " + str(list_file) + r" " +cmd = (r"Rscript "+ str(ins_path) + r"/bubbles_v9_NSAF_natural_log.R " + str(list_file) + r" " + str(prey_file) + r" " + str(crapome) + r" " + str(color) + r" " + str(label) + r" " - + str(cutoff) + r" " + str(mq_sc) + r" " + str(inc_file) + r" " + str(exc_file) + + str(cutoff) + r" " + str(mq_sc) + r" " + str(inc_file) + r" " + str(exc_file)) os.system(cmd) time.sleep(3)