Mercurial > repos > bornea > saint_interactions

comparison ProteinInteractions_v2.py @ 10:00fbbb20ffbe draft

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author bornea
date Thu, 19 Nov 2015 11:45:52 -0500
parents 6ff557cd705f
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9:6ff557cd705f 10:00fbbb20ffbe
6 # interactions that don't score well 6 # interactions that don't score well
7 ################################################################################ 7 ################################################################################
8 import urllib2 8 import urllib2
9 import itertools 9 import itertools
10 import sys 10 import sys
11 import os
11 ################################################################################ 12 ################################################################################
12 ## REQUIRED INPUT ## 13 ## REQUIRED INPUT ##
13 14
14 # 1) listfile: SAINTexpress output 15 # 1) listfile: SAINTexpress output
15 # 2) SAINT_cutoff: Saint score cutoff for import (between 0 and 1) 16 # 2) SAINT_cutoff: Saint score cutoff for import (between 0 and 1)