Mercurial > repos > bornea > saint_preprocessing
comparison SAINT_preprocessing.py @ 16:4b43913630d0 draft
Uploaded
author | bornea |
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date | Tue, 12 Apr 2016 15:07:32 -0400 |
parents | 876af85d782c |
children | 72fe77df329b |
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15:876af85d782c | 16:4b43913630d0 |
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51 if baits[i+2] == "true": | 51 if baits[i+2] == "true": |
52 T_C = "C" | 52 T_C = "C" |
53 else: | 53 else: |
54 T_C = "T" | 54 T_C = "T" |
55 bait_line = baits[i] + "\t" + baits[i+1] + "\t" + T_C + "\n" | 55 bait_line = baits[i] + "\t" + baits[i+1] + "\t" + T_C + "\n" |
56 bait_cach.append(str(bait_line)) | 56 bait_cache.append(str(bait_line)) |
57 i = i + 3 | 57 i = i + 3 |
58 | 58 |
59 for cache_line in bait_cache: | 59 for cache_line in bait_cache: |
60 bait_file_tmp.write(cache_line[1]) | 60 bait_file_tmp.write(cache_line[1]) |
61 | 61 |