comparison SAINT_preprocessing_mq_pep.py @ 46:5b2a60b59f46 draft

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45:0eae5a2c37d4

    print valid_prots
    with open('inter.txt', 'w') as input_file:
        l = 0; a = 0
        for bb in bait:
            for lst in data:
                if valid_prots[a] not in errors:
                    print lst
                    print l
                    print a
                    input_file.write(header[bait_index[l]] + '\t' + bb[1] + '\t' + valid_prots[a] + '\t' + lst[bait_index[l]] + '\n')
                    print(header[bait_index[l]] + '\t' + bb[1] + '\t' + valid_prots[a] + '\t' + lst[bait_index[l]] + '\n')
                a += 1
                if a == len(valid_prots):
                    l += 1; a = 0

46:5b2a60b59f46

    print valid_prots
    with open('inter.txt', 'w') as input_file:
        l = 0; a = 0
        for bb in bait:
            for lst in data:
                if lst[0] in valid_prots:
                    input_file.write(header[bait_index[l]] + '\t' + bb[1] + '\t' + lst[0] + '\t' + lst[bait_index[l]] + '\n')
                a += 1
                if a == len(valid_prots):
                    l += 1; a = 0