comparison SAINT_preprocessing.py @ 50:61b792d17660 draft

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49:6bb30aeb02bd

                valid_prots.append(a)
    with open('inter.txt', 'w') as input_file:
        l = 0; a = 0
        for bb in bait:
            for lst in data:
                if lst[0] in valid_prots:
                    input_file.write(header[bait_index[l]] + '\t' + bb[1] + '\t' + lst[0] + '\t' + lst[bait_index[l]] + '\n')
                a += 1
                if a == len(proteins):
                    l += 1; a = 0

50:61b792d17660

                valid_prots.append(a)
    with open('inter.txt', 'w') as input_file:
        l = 0; a = 0
        for bb in bait:
            for lst in data:
                print lst
                if lst[0] in valid_prots:
                    input_file.write(header[bait_index[l]] + '\t' + bb[1] + '\t' + lst[0] + '\t' + lst[bait_index[l]] + '\n')
                a += 1
                if a == len(proteins):
                    l += 1; a = 0