comparison SAINT_preprocessing_mq_pep.py @ 47:8ca1d3bc5906 draft

Uploaded

46:5b2a60b59f46

        for bb in bait:
            for lst in data:
                if lst[0] in valid_prots:
                    input_file.write(header[bait_index[l]] + '\t' + bb[1] + '\t' + lst[0] + '\t' + lst[bait_index[l]] + '\n')
                a += 1
                if a == len(valid_prots):
                    l += 1; a = 0


def bait_check(bait, MaxQuant_input):
    # Check that bait names share header titles.

47:8ca1d3bc5906

        for bb in bait:
            for lst in data:
                if lst[0] in valid_prots:
                    input_file.write(header[bait_index[l]] + '\t' + bb[1] + '\t' + lst[0] + '\t' + lst[bait_index[l]] + '\n')
                a += 1
                if a == len(proteins):
                    l += 1; a = 0


def bait_check(bait, MaxQuant_input):
    # Check that bait names share header titles.