Mercurial > repos > bornea > saint_preprocessing

diff SAINT_preprocessing_mq_pep.py @ 31:761e1ad2b130 draft

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author bornea
date Tue, 26 Apr 2016 16:21:13 -0400
parents bd71998aec8d
children 05c5844e037b
line wrap: on
line diff
--- a/SAINT_preprocessing_mq_pep.py	Tue Apr 26 16:16:56 2016 -0400
+++ b/SAINT_preprocessing_mq_pep.py	Tue Apr 26 16:21:13 2016 -0400
@@ -40,9 +40,10 @@
     os.system(cmd)
 else:
     cmd = (r"Rscript "+ str(ins_path) +"pre_process_protein_name_set.R " + str(mq_file) +
-        " " + str(fasta_db)
+        " " + str(fasta_db))
     os.system(cmd)
 
+
 infile = "./tukeys_output.txt" 
 # The MaxQuant "Samples Report" output.
 prey = sys.argv[2]