# HG changeset patch
# User bornea
# Date 1461767722 14400
# Node ID 05c5844e037ba67e71a64b75b07e668336a32376
# Parent  d223d815e9c53e1bf3a729292046a445205c60df
Uploaded

diff -r d223d815e9c5 -r 05c5844e037b SAINT_preprocessing_mq_pep.py
--- a/SAINT_preprocessing_mq_pep.py	Wed Apr 27 10:35:13 2016 -0400
+++ b/SAINT_preprocessing_mq_pep.py	Wed Apr 27 10:35:22 2016 -0400
@@ -232,7 +232,8 @@
         seq = get_info(a).seqlength
         GN = get_info(a).genename
         if seq != 'NA':
-            output_file.write(a+"\t"+str(seq)+ "\t" + str(GN) + "\n")
+            if GN != 'NA':
+                output_file.write(a+"\t"+str(seq)+ "\t" + str(GN) + "\n")
     output_file.close()