# HG changeset patch
# User bornea
# Date 1463673281 14400
# Node ID 8ca1d3bc590648499d2eaae596b15aaa180a13d5
# Parent  5b2a60b59f466b0f3e41ac8dc8636851070ccc5f
Uploaded

diff -r 5b2a60b59f46 -r 8ca1d3bc5906 SAINT_preprocessing_mq_pep.py
--- a/SAINT_preprocessing_mq_pep.py	Thu May 19 10:59:04 2016 -0400
+++ b/SAINT_preprocessing_mq_pep.py	Thu May 19 11:54:41 2016 -0400
@@ -272,7 +272,7 @@
                 if lst[0] in valid_prots:
                     input_file.write(header[bait_index[l]] + '\t' + bb[1] + '\t' + lst[0] + '\t' + lst[bait_index[l]] + '\n')
                 a += 1
-                if a == len(valid_prots):
+                if a == len(proteins):
                     l += 1; a = 0