comparison Protein_report_processing.py @ 8:e1d6909836cd draft

Uploaded

7:41d81e97186d

import sys
import os
from time import sleep

files = sys.argv[1] # read in a string of file names seperated by ", "
# e.g. "Default_Protein_Report.txt, Default_Protein_Report_2.txt"
#bait = sys.argv[2] # SAINT formatted bait file
# still need a way to match files to bait identifiers
# or they can just be required to be put in the order of the bait file
quant_type = sys.argv[3] # what metric to use for quantification

8:e1d6909836cd

import sys
import os
from time import sleep

files = sys.argv[1] # read in a string of file names seperated by ", "
print files
# e.g. "Default_Protein_Report.txt, Default_Protein_Report_2.txt"
#bait = sys.argv[2] # SAINT formatted bait file
# still need a way to match files to bait identifiers
# or they can just be required to be put in the order of the bait file
quant_type = sys.argv[3] # what metric to use for quantification