Mercurial > repos > bornea > saint_preprocessing_peptideshaker

diff Protein_report_processing.py @ 10:9ec349fd0e66 draft

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author bornea
date Tue, 23 Aug 2016 19:26:13 -0400
parents e01bdd338210
children fcacb3f20451
line wrap: on
line diff
--- a/Protein_report_processing.py	Tue Aug 23 19:21:40 2016 -0400
+++ b/Protein_report_processing.py	Tue Aug 23 19:26:13 2016 -0400
@@ -175,6 +175,8 @@
     replicate_index = master_table[0].index("Replicate")
     grouping_index = master_table[0].index("Bait_Grouping")
     accession_index = master_table[0].index("Main Accession")
+    quant_type = quant_type.replace("_", " ")
+    quant_type = r"#" + quant_type
     Quant_index = master_table[0].index(quant_type)
     inter_file = ""
     for i in master_table[1:]: