comparison saint_wrapper.xml @ 29:c75a787fd1b1 draft

Uploaded

28:b7e5a9bfa620

  </inputs>
  <outputs>
    <data format="txt" name="output" />
  </outputs>
  <stdio>
    <regex match="error"
	   source="stdout"
           level="fatal"
           description="Unknown error"/>
  </stdio> 

  <tests>
    <test>
      <param name="input" value="fa_gc_content_input.fa"/>
      <output name="out_file1" file="fa_gc_content_output.txt"/>
    </test>
  </tests>
  <help>
    <!--
      AB: Needs some help probably copy paste from Saint manual if that is okay.
    -->
  </help>
</tool>

29:c75a787fd1b1

  </inputs>
  <outputs>
    <data format="txt" name="output" />
  </outputs>
  <stdio>
    <regex match="Error|error"
     source="stdout"
           level="fatal"
           description="Unknown error"/>
    <regex match="Error|error"
     source="stderr"
           level="fatal"
           description="Unknown error"/>
    <regex match="Error: bad bait"
           source="stdout"
           level="fatal"
           description="Error: bad bait"/>
  </stdio> 

  <tests>
    <test>
      <param name="input" value="fa_gc_content_input.fa"/>
      <output name="out_file1" file="fa_gc_content_output.txt"/>
    </test>
  </tests>
  <help>

  </help>
</tool>