Mercurial > repos > bornea > saint_tool
diff tool_dependencies.xml @ 6:d2552e48b852 draft
Uploaded
author | bornea |
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date | Tue, 10 Nov 2015 11:47:58 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Tue Nov 10 11:47:58 2015 -0500 @@ -0,0 +1,19 @@ +<?xml version="1.0"?> +<tool_dependency> + <!--<set_environment version="1.0"> + <environment_variable name="R_SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR/bubblebeam</environment_variable> + </set_environment>--> + <package name="saint_wrapper"> + <install version="1.0"> + <actions> + <action type="shell_command">git clone http://github.com/bornea/Saint_On_Galaxy</action> + <action type="shell_command">unzip SAINTexpress_v3.6.1__2015-05-03.zip</action> + <action type="shell_command">./make -j</action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$REPOSITORY_INSTALL_DIR/Saint_On_Galaxy/SAINTexpress_v3.6.1__2015-05-03/bin</environment_variable> + </action> + </actions> + </install> + <readme></readme> + </package> +</tool_dependency> \ No newline at end of file