diff test-data/paired_READ1.fq @ 0:40c86e14b674 draft

Uploaded first version of tagdust

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/paired_READ1.fq	Mon May 09 04:08:01 2016 -0400
@@ -0,0 +1,216 @@
+@NB500968:8:H5CFGAFXX:1:11101:1121:1139___1:N:0:TCGTGAGC+TACTCCTT;FP:27828;RQ:34.83;RQ:-1.00
+GGAGCGTCAGATGTGTATAAGAGACAGGTATTCCCTATAGTCTACATC
++
+EEEEEEEEEEEEEEEAAEEEEAEEEAEEE/EEE/EE<AAEEEEEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:7529:1175___1:N:0:TCCTGAGC+TACTCCTT;FP:17358;RQ:34.81;RQ:-1.00
+AGCGTCAGATGTGTATAAGAGACAGCAACCCTAAAAATATCCA
++
+EEEE/EEEEEEA/EA<EEEE/AEEEE//E//6A/AE/A/AAE/
+@NB500968:8:H5CFGAFXX:1:11101:5052:1198___1:N:0:TCCTGAGC+TACTCCTT;FP:38799;RQ:34.63;RQ:-1.00
+GGTTTTTAGTGGCATTCATTGTGTGGATTCCTCTGTTGCTGCCCCTGGGCTAACAAGGGT
++
+EEEEEEE6EEEEAEEEEEEEEEEEAEEEEEEEEEEEEEAAE/AEEEEEAAAEEEE/EAEE
+@NB500968:8:H5CFGAFXX:1:11101:15805:1205___1:N:0:TCCTGAGC+TACTCCTT;FP:44542;RQ:34.63;RQ:-1.00
+GAGGGCCAGGCAGCTCAAAGCCTGAAGGAGGTACTTCAAGGAGGGTCCAGAGAAGCTGGG
++
+EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAEEEEEEEEE<EAAEEEEEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:11834:1217___1:N:0:TCCTGAGC+TACTCCTT;FP:56795;RQ:34.81;RQ:-1.00
+AGCGTCAGATGTGTATAAGAGACAGGATTCCCCTATATAGCGACCC
++
+EEEEEEEEEEEEEEEEAEEEEEEEEEEAEEEEEEEEEA<EAEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:20105:1230___1:N:0:TCCTGAGC+TACTCCTT;FP:2265;RQ:34.63;RQ:-1.00
+GTTGTTTCATGTTGCAATTTTTAGGTTACTTTTGAGTTGCTTAGGAATTGTTTTATTTAA
++
+EEEEEEEEEE/E/AEEEEE<E</EEAEEEEEEAAEAEEEAAE//EA//</E6EAAEA/6/
+@NB500968:8:H5CFGAFXX:1:11101:14524:1264___1:N:0:TCCTGAGC+TACTCCTT;FP:7937;RQ:2.65;RQ:-1.00
+CCCAACTTAATATTATAAAATTATCATAAAAACAACTACGAGCCCACGATACAACTGATA
++
+//EEEE<///A/AAA/A////E/<///E/6/E/E/E6///E//6E<//6/AA//E//A//
+@NB500968:8:H5CFGAFXX:1:11101:14981:1265___1:N:0:TCCTGAGC+TACTCCTT;FP:26333;RQ:34.63;RQ:-1.00
+GTCTGGTTAATTCCGATAACGAACGAGACTCTGGCATGCTAACTAGTTACGCGACCCCCG
++
+EEEEEEEEEEEEEAEEEEEEEEEAAEEEEEEEA<EEEEEEEEE6/E66A<A/<AA<A//6
+@NB500968:8:H5CFGAFXX:1:11101:5538:1286___1:N:0:TCCTGAGC+TACTCCTT;FP:5079;RQ:34.62;RQ:-1.00
+AGTGAACTAACTAGAAAACTTCTAACTAAAAGAATTACAGCTAGAAACCCCGAAACCAAA
++
+AAEEEEEEEEAE/AEEEEEEEAEEEEE/AE6/EEA<E/EA6EAAEEE6//6<<EEA/<<A
+@NB500968:8:H5CFGAFXX:1:11101:12411:1441___1:N:0:TCCTGAGC+TACTCCTT;FP:46039;RQ:34.83;RQ:-1.00
+GGGAGCGTCAGATGTGTATAAGAGACAGTCTCCCTATATTTTGGC
++
+//AEEE/EAEAEE/AEAE<EEEEAE/EAE<E/E</EEEE/6E/EE
+@NB500968:8:H5CFGAFXX:1:11101:5889:1458___1:N:0:TCCTGAGC+TACTCCTT;FP:52002;RQ:34.83;RQ:-1.00
+GAGCGTCAGATGTGTATAAGAGACAGCGTATCCCTATACCCCTTCGCTG
++
+EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAEEEEEEEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:9851:1471___1:N:0:TCCTGAGC+TACTCCTT;FP:43356;RQ:3.17;RQ:-1.00
+CCCCTGTCTCTTATACCNNN
++
+EEEEEA/AA/EEEEE//###
+@NB500968:8:H5CFGAFXX:1:11101:5425:1488___1:N:0:TCCTGAGC+TACTCCTT;FP:13390;RQ:34.83;RQ:-1.00
+GGAGCGTCAGATGTGTATAAGAGACAGACTCCCCTATATGGACACA
++
+EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:8024:1581___1:N:0:TCCTGAGC+TACTCCTT;FP:38311;RQ:34.63;RQ:-1.00
+GTGACCCGCCGCTTCAGGGACCCGCTTCTCTCATCTTCCCCAAAGTTCTGGACAGATGAT
++
+EEEEEEEAEEEEEAEAEEEEEEEEEEAEEEEAEEEAEAEEEEEEEEAEEEEEEEEEE/A<
+@NB500968:8:H5CFGAFXX:1:11101:23474:1673___1:N:0:TCCTGAGC+TACTCCTT;FP:2968;RQ:34.81;RQ:-1.00
+AGCGTCAGATGTGTATAAGAGACAGAGGCGCCCTATAGAATATAT
++
+EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAEE/EEEEE
+@NB500968:8:H5CFGAFXX:1:11101:21720:1786___1:N:0:TCCTGAGC+TACTCCTT;FP:16257;RQ:35.14;RQ:-1.00
+GGGAGCGTCAGATGTGTATAAGAGAC
++
+EEEEEEEEEEEEEEEEEEEEEEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:9012:1809___1:N:0:TCCTGAGC+TACTCCTT;FP:4167;RQ:34.83;RQ:-1.00
+GGGAGCGTCAGATGTGTATAAGAGACAGGTACCCCCTATATCATAGGC
++
+EEEEEEEEEEEEEEEEEAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:20110:1819___1:N:0:TCCTGAGC+TAATCCTT;FP:64559;RQ:34.63;RQ:-1.00
+GGATTCTTGAAGTATAACAGGAGAATCAAATAATTAAAGAGGGGGCTGGAGAGATAGCT
++
+EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAEEEEEEEEEEEEEEEEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:24842:1887___1:N:0:TCCTGAGC+TACTCCTT;FP:13772;RQ:35.14;RQ:-1.00
+GGGAGCGTCAGATGTGTATAAGAG
++
+EEEEEEEEEEEEEEEEEEEEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:16709:1904___1:N:0:TCCTGAGC+TACTCCTT;FP:5671;RQ:34.73;RQ:-1.00
+GTTCCATGCGTCAATGTTTCTTCTGGATACAGCAGGCCTGTTCCCGGGAGTCAATGC
++
+EEEEEAEEEEEEEEEEAEEEEEEEEEEEAEE6<EEEEEAAA<EAEEEEEEEEEEE<E
+@NB500968:8:H5CFGAFXX:1:11101:12189:1919___1:N:0:TCCTGAGC+TACTCCTT;FP:53204;RQ:34.62;RQ:-1.00
+ACACCCTTTATAGTGATGGATTGGATCTGTTTGAAGGCAAAGTCCTTCCCAGACTTATCA
++
+EEEEEEE/EEE/EEAEEEEEEEEEEE/EE<EAAAE/E<</EA///A</E/A/AAA<A/</
+@NB500968:8:H5CFGAFXX:1:11101:17381:2018___1:N:0:TCCTGAGC+TACTCCTT;FP:64754;RQ:35.18;RQ:-1.00
+AACGTCAGATGTGTATAAGN
++
+EEE/EEEAEEEEEAE</EA#
+@NB500968:8:H5CFGAFXX:1:11101:9520:2027___1:N:0:TCCTGAGC+TACTCCTT;FP:57159;RQ:34.81;RQ:-1.00
+AGCGTCAGATGTGTATAAGAGACAGCTACATCCCTATAAGGATGTAC
++
+EEEEEEEEEEEEEEEEAEEEEEEEEEEAEEEEEEE/EEEEE<AEEEA
+@NB500968:8:H5CFGAFXX:1:11101:19677:2089___1:N:0:TCCTGAGC+TACTCCTT;FP:14776;RQ:34.63;RQ:-1.00
+GGCGCCAGTCCTCCGATTGACTGAGTCGCCCGGGTACCCGTGTATCCAATAAACCCTCTT
++
+EEEEEEEAEEEEEEEAE/EEEEEEEEAEEE//E/EEE/A<AAAAAA<AEAE/EE/AAA<6
+@NB500968:8:H5CFGAFXX:1:11101:26158:2095___1:N:0:TCCTGAGC+TACTCCTT;FP:23868;RQ:34.83;RQ:-1.00
+GGGAGCGTCAGATGTGTATAAGAGACAGCCACTCCCTATAGGATTTCC
++
+EEEEEEEEEAEEEEEEEEEEEEEEEEEEA<EEEEAEEA<6EEEEE<EA
+@NB500968:8:H5CFGAFXX:1:11101:7883:2101___1:N:0:TCCGGAGC+TACTCCTT;FP:59501;RQ:34.83;RQ:-1.00
+GGAGCGTCAGATGTGTATAAGAGACAGCATCACCCTATAGGCTGTCT
++
+EEEEEEEEEEEEEEAEAEEEEEEEEEEEEEEEEEEEEE<EEEEEEAE
+@NB500968:8:H5CFGAFXX:1:11101:24496:2131___1:N:0:TCCTGAGC+TACTCCTT;FP:247;RQ:35.19;RQ:-1.00
+GGGAGCGTCAGATGTGTATAAG
++
+EEEEEEEEEEE/EEEEEEE/AE
+@NB500968:8:H5CFGAFXX:1:11101:5814:2162___1:N:0:TCCTGAGC+TACTCCTT;FP:5751;RQ:34.63;RQ:-1.00
+GCCCTTGGCTTCACCACACTTTCTACTGGAAATGTGCCTTTTCCTCCATTGCTGCTAC
++
+EEEEEEEEEEEEEEEAAEEEAEEEEEA/EEEEEE<EEEAEAAEEAEEE<AAEAEEAAE
+@NB500968:8:H5CFGAFXX:1:11101:5796:2184___1:N:0:TCCTGAGC+TATTCCTT;FP:4250;RQ:34.83;RQ:-1.00
+GGAGCGTCAGATGTGTATAAGAGACAGGCTGTCCCTATAGACTGACT
++
+EEEEEEEEEEEEEEEAEAEEEEEEEEEEEEEEEEAEEEEEEEEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:23937:2223___1:N:0:TCCTGAGC+TACTCCTT;FP:26022;RQ:34.63;RQ:-1.00
+GCTTCTTCTGAAGAGCTCCACCTGTGGTCTCTCCACCTCTCGAGGCTCTTCACTAGCCT
++
+EEEEAEA/AEEEEEEEA/</</</A//EAEEE<AE66A666/A/E6E/AAAAA////E/
+@NB500968:8:H5CFGAFXX:1:11101:25267:2246___1:N:0:TCCTGAGC+TACTCCTT;FP:4173;RQ:34.83;RQ:-1.00
+GAGCGTCAGATGTGTATAAGAGACAGGATGCCCCTATATATAGAGGCTG
++
+E6EEEEAAEEEEEEEAEEEEEEEEEEEEEEE6EEEEEEEEEAEAEEAEA
+@NB500968:8:H5CFGAFXX:1:11101:6670:2262___1:N:0:TCCTGAGC+TACTCCTT;FP:14539;RQ:3.28;RQ:-1.00
+GGAGGCCAAATTGTGCTGATTTTCCTGTAGCTGCGATTAATAGGCCTATAAGTGGAATTA
++
+EEEEEEEEEEAEAEEAEEEEEEEE/EAEEEAEEAEEAE/EEAE/</E/EA66A<//<EE/
+@NB500968:8:H5CFGAFXX:1:11101:14858:2304___1:N:0:TCCTGAGC+TACTCCTT;FP:4202;RQ:34.63;RQ:-1.00
+GTCTCCGGCTTGTGTAGACTCTGCCTGGAAGTGAAGTTGTGGACTCCCGACCTCCAGTC
++
+EEEEEEEEEEEEEEEEEEEEEA/E/AEEEEEAEEEEAE/<AAEEE<EAEEE<EEAEEEE
+@NB500968:8:H5CFGAFXX:1:11101:10463:2345___1:N:0:GCCTGAGC+TACTCCTT;FP:24337;RQ:34.81;RQ:-1.00
+TCCAGCGTCAGATGTGTATAAGAGACAGAGTTCCCCTATAGAGAGACG
++
+EEEEEEEEEEE6EEEEA/A//E/EEEEEEEEEEEEEEAA/AAEEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:24405:2351___1:N:0:TCCTGAGC+TACTCCTT;FP:5580;RQ:35.18;RQ:-1.00
+TCTGTCTCTTATACCNNNNN
++
+EEEEEEAEEEEEEEE#####
+@NB500968:8:H5CFGAFXX:1:11101:6508:2370___1:N:0:TCCTGAGC+TACTCCTT;FP:64422;RQ:34.83;RQ:-1.00
+GGAGCGTCAGATGTGTATAAGAGACAGCCCAGCCCTATACCGTCTAGCTG
++
+EEEEEEEEEEEEEAEAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:21730:2488___1:N:0:TCGTGAGC+TACTCCTT;FP:57284;RQ:35.18;RQ:-1.00
+AGCGTCAGATGTGTATCNNN
++
+EEEEEEEEEEEEEAEAE###
+@NB500968:8:H5CFGAFXX:1:11101:20021:2516___1:N:0:TCCTGGGC+TACTCCTT;FP:28351;RQ:34.83;RQ:-1.00
+GGAGCGTCAGATGAGTATAAGAGACAGTCATCCCCTATAGTCGTTCA
++
+EAEEAAEEAAE///E/EAAE/EAEE//EEE/EEEEEE/EE/EA6EEE
+@NB500968:8:H5CFGAFXX:1:11101:4827:2579___1:N:0:TCCTGAGC+TACTCCTT;FP:8626;RQ:34.83;RQ:-1.00
+GACAGCGTCAGATGTGTATAAGAGACAGGGAATCCCTATAGACTTTGC
++
+EEEEEEEEE/E<AAAEEEEEEEE/E/EEEEEEEEEEEAEEAEAAEEE/
+@NB500968:8:H5CFGAFXX:1:11101:11758:2662___1:N:0:TCCTGAGC+TACTCCTT;FP:32308;RQ:34.83;RQ:-1.00
+GACAGCGTCAGATGTGTATAAGAGACAGAGATGCCCTATAGACCGAAC
++
+EEEEEE/EAE/EEE/EEEAEE6E6EEEEEAAEA/E/AEEEA/E6EA/E
+@NB500968:8:H5CFGAFXX:1:11101:23131:2747___1:N:0:TCCTGAGC+TACTCCTT;FP:61606;RQ:34.61;RQ:-1.00
+CAGACGTTCGAATGGGTCGTCGCCGCCACGGGGGGCGTGCGATCGGCCCGAGGTTATCTA
++
+EEEEEEAEAEEEE/EEEAEEEEA/EEEEAEA/EA<EAAAEEAE<AE/A<<EEEA<<EEA<
+@NB500968:8:H5CFGAFXX:1:11101:20373:2751___1:N:0:TCCTGATC+TACTCCTT;FP:283;RQ:34.93;RQ:-1.00
+GGAGCGTCAGATGTGTATAAGAGACAGCCCTATACAGTGATC
++
+EEEEEEEEE<EEEEAEAEEEEEEEEEEEEEE/EEEEEE<EAA
+@NB500968:8:H5CFGAFXX:1:11101:21204:2795___1:N:0:TCCTGAGC+TACTCCTT;FP:16279;RQ:34.81;RQ:-1.00
+AGCGTCAGATGTGTATAAGAGACAGCTCCACCCTATAGGCCCTAACTG
++
+EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:17699:2880___1:N:0:TCCTGAGC+TACTCCTT;FP:52710;RQ:34.62;RQ:-1.00
+CTTTGGAATCTTCACAAGCAGAACCAGTCAAAACCCCGGCAAGCACAAAGAGACTCTCCA
++
+EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE<EEEEEEEEEEE6AEAEAEEEEA
+@NB500968:8:H5CFGAFXX:1:11101:2261:2941___1:N:0:TCCTGAGC+TACTCCTT;FP:2596;RQ:34.63;RQ:-1.00
+GGCAGCATCAGATGTGTATAAGAGACAGAAGGAGCAGAGAGCGGCCAGCAACCGATGAGA
++
+EEEEEEEEEEEEEEAEEEAEEEEE///////EA//E/E/A/////E<EE//</E<<////
+@NB500968:8:H5CFGAFXX:1:11101:25690:2959___1:N:0:TCCTGCGC+TACTCCTT;FP:27004;RQ:34.81;RQ:-1.00
+AGCGTCAGATGTGTATAAGAGACAGGCCTCCCCTATAGCTTCGGA
++
+AE6EEEEEEEEEAAEEEEEEEEEEEEEEAEE/E/EAEEEEAEEEE
+@NB500968:8:H5CFGAFXX:1:11101:8090:2972___1:N:0:TCCTGAGC+TACTCCTT;FP:12902;RQ:34.81;RQ:-1.00
+CAACGTCAGATGTGTATAAGAGACAGGGACCCCCTATAATTTATGCC
++
+EEEEEEEEEEEEEEEEEAAEEEEEEEEEAEE<EEEEEAE<EEEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:16936:3211___1:N:0:TCCTGAGC+TACTCCTT;FP:7401;RQ:34.83;RQ:-1.00
+GAGCGTCAGATGTGTATAAGAGACAGTGCGTCCCTATAAAAGTGAACTG
++
+EEEEEEEEEEEEEEEEEEEEEEEEAEEEEEEEEEEEEEA/EEEAEAEEE
+@NB500968:8:H5CFGAFXX:1:11101:6132:3257___1:N:0:TCCTGAGC+TACTCCTT;FP:7557;RQ:34.62;RQ:-1.00
+CGTCAGATGTGTATAAGAGACAGCATTCCCCTATACACGCCTCCTGTCTCTTATAC
++
+EEEEAEEEEEEEEEEEEEEAEAEEAEEEEAEEEEEEEEEEEEEEEEAE/EEEEEEA
+@NB500968:8:H5CFGAFXX:1:11101:3840:3285___1:N:0:TCCTGAGC+TACTCCTT;FP:16156;RQ:34.93;RQ:-1.00
+GGGAGCGTCAGATGTGTATAAGAGACAGGTATACCCTATAG
++
+EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:2858:3312___1:N:0:TCCTGAGC+TACTCCTT;FP:14452;RQ:35.12;RQ:-1.00
+AACGTCAGATGTGTATAAGAG
++
+EE/AE/E/EAAEEEEEEEAEE
+@NB500968:8:H5CFGAFXX:1:11101:3641:3398___1:N:0:TCCTGAGC+TACTCCTT;FP:36051;RQ:35.14;RQ:-1.00
+GCAGCGTCAGATGTGTATAAGAG
++
+EEEEEEEEEEEEEEEEEEEEEEE
+@NB500968:8:H5CFGAFXX:1:11101:20540:3401___1:N:0:TCCTGAGC+TACTCCTT;FP:48603;RQ:34.81;RQ:-1.00
+AGCGTCAGATGTGTATAAGAGACAGATCAACCCTATATGCCCTAACTG
++
+E/E///E/E</A/EEA<E/E/EEE/E</E///A/E6<E/A/<E/EEE/
+@NB500968:8:H5CFGAFXX:1:11101:4772:3477___1:N:0:TCCTGAGC+AACTCCTT;FP:61788;RQ:3.33;RQ:-1.00
+TAACTGTCTCTTATACACCN
++
+EEEEEEEAEEEAEEE<EEE#