Mercurial > repos > brigidar > getfasta
comparison getfasta.xml @ 1:63d8d535d834 draft
Uploaded
| author | brigidar |
|---|---|
| date | Tue, 20 Oct 2015 21:18:29 -0400 |
| parents | 28c130b826a3 |
| children |
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| 0:28c130b826a3 | 1:63d8d535d834 |
|---|---|
| 1 <tool id="bedtools_getfasta" name="extract fasta from bed" version="0.2.0"> | 1 <tool id="bedtools_getfasta" name="extract fasta from bed" version="0.3.0"> |
| 2 | 2 |
| 3 <description> | 3 <description> |
| 4 </description> | 4 </description> |
| 5 | 5 |
| 6 <requirements> | 6 <requirements> |
| 7 <requirement type="binary">bedTofasta</requirement> | 7 <requirement type="package" version="2.22">bedtools</requirement> |
| 8 </requirements> | 8 </requirements> |
| 9 | 9 |
| 10 <command> | 10 <command> |
| 11 bedtools getfasta -fi '$input' -bed '$bedfile' -fo output.out | 11 bedtools getfasta -fi '$input' -bed '$bedfile' -fo output.out |
| 12 </command> | 12 </command> |