Mercurial > repos > brigidar > select_product
view select_product.xml @ 2:04128b8f7bc7 draft
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author | brigidar |
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date | Thu, 08 Oct 2015 15:40:52 -0400 |
parents | c76d2a6bedee |
children | 342d303e5468 |
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<tool id="select_product" name="select_product" version="0.2"> <description>Finds all CDS that match the key words provided in the comma separated argument -k in the product description adds a given number of bases on each side of the transcript for the exclusion set</description> <requirements> </requirements> <command iterpreter="python"> select_product.py -g $input_file -n $number -k $keys > output_file </command> <inputs> <param format="gbk" name="input_file" type="data" label="reference genbank file"/> <param name="number" type="integer" value="50" label="flanking region"/> <param name="keys" type="text" label=" list of keys separated by comma of product names"> </inputs> <outputs> <data format="tabular" name="output_file" from_work_dir="output_file"> </data> </outputs> <tests> <!-- Empty --> </tests> <help> .. class:: infomark **What it does** wrapper for select product script ------------- .. class:: infomark **Tool Author** Brigida Rusconi </help> </tool>