# HG changeset patch
# User brigidar
# Date 1446511374 18000
# Node ID d5725351bf221ab481088c4caac09af42c7551cc
# Parent  866cd9ce1cbdd99cda87d85f909c137e5e23af10
update output file

diff -r 866cd9ce1cbd -r d5725351bf22 vcf_to_snp.xml
--- a/vcf_to_snp.xml	Mon Nov 02 19:42:35 2015 -0500
+++ b/vcf_to_snp.xml	Mon Nov 02 19:42:54 2015 -0500
@@ -1,4 +1,4 @@
-<tool id="vcf_snp" name="vcf to snp" version="0.2">
+<tool id="vcf_snp" name="vcf to snp" version="0.3">
     <description>vcf to snp for fasta</description>
     <requirements>
        <!-- Should just use the filter snp that's installed in the path -->
@@ -9,7 +9,7 @@
 ## Lines starting hash hash are comments. Galaxy will turn newlines into spaces
 ## ! We only have a simple single command here.
 
-    <command interpreter="python">
+    <command interpreter="/usr/local/anaconda/bin/python">
         vcf_snp.py
         -s ${vcf}
         -o output.txt
@@ -22,7 +22,7 @@
     </inputs>
 
     <outputs>
-        <data format="tabular" name="output_file" label="${vcf}" from_work_dir="tab.txt">
+        <data format="tabular" name="output_file" label="${vcf}" from_work_dir="output.txt">
             </data>
     </outputs>