Mercurial > repos > brinkmanlab > extract_tree_order
comparison extract_tree_order.xml @ 2:eb980e8bb133 draft default tip
"planemo upload for repository https://github.com/brinkmanlab/galaxy-tools/tree/master/<name of containing folder> commit 669399887aebfe546eae29022f446664d9b52d44"
author | brinkmanlab |
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date | Sat, 05 Sep 2020 08:30:33 +0000 |
parents | ddf5427278ee |
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1:ddf5427278ee | 2:eb980e8bb133 |
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7 <edam_operations> | 7 <edam_operations> |
8 <edam_operation>operation_0326</edam_operation> | 8 <edam_operation>operation_0326</edam_operation> |
9 <edam_operation>operation_3434</edam_operation> | 9 <edam_operation>operation_3434</edam_operation> |
10 </edam_operations> | 10 </edam_operations> |
11 <requirements> | 11 <requirements> |
12 <requirement type="package" version="3.7">python</requirement> | |
13 <requirement type="package" version="1.76">biopython</requirement> | 12 <requirement type="package" version="1.76">biopython</requirement> |
14 </requirements> | 13 </requirements> |
15 <command detect_errors="aggressive"><![CDATA[ | 14 <command detect_errors="aggressive"><![CDATA[ |
16 python -c \$'from Bio import Phylo\nfor clade in Phylo.read("$input", "newick").get_terminals(order="preorder"): print(clade.name)' > '$output' | 15 python -c \$'from Bio import Phylo\nfor clade in Phylo.read("$input", "newick").get_terminals(order="preorder"): print(clade.name)' > '$output' |
17 ]]></command> | 16 ]]></command> |