comparison sha256sum.xml @ 0:f680aef3456b draft default tip

"planemo upload for repository https://github.com/brinkmanlab/galaxy-tools/tree/master/hash commit 33b02e08cbc8f76fb4b8537f8c968393f85a1b5e-dirty"

0:f680aef3456b

<tool id="sha256sum" name="Coreutils sha256sum" version="1.0" profile="16.04">
    <description>Generate or check SHA256 (256-bit) checksums</description>
    <edam_topics>
        <edam_topic>topic_3572</edam_topic>
    </edam_topics>
    <edam_operations>
        <edam_operation>operation_3283</edam_operation>
        <edam_operation>operation_3348</edam_operation>
    </edam_operations>
    <requirements>
        <requirement type="package">coreutils</requirement>
    </requirements>
    <version_command><![CDATA[ sha256sum --version ]]></version_command>
    <command detect_errors="aggressive"><![CDATA[
        #if $input.is_of_type("binary")
            #set $type = '--binary'
        #else
            #set $type = '--text'
        #end if
        #if $mode_select.mode == '--check'
            echo '$input' | cat $mode_select.hash - | sha256sum $tag $type $mode_select.mode --warn --status
        #else
            sha256sum $tag $type $input | sed 's/  .*//' > $output
        #end if
    ]]></command>
    <inputs>
        <param name="input" type="data" format="data" label="Input" />
        <conditional name="mode_select">
            <param name="mode" type="select" label="Mode">
                <option value="" selected="true">Generate hash</option>
                <option value="--check">Compare hash</option>
            </param>
            <when value="">
            </when>
            <when value="--check">
                <param name="hash" type="data" format="txt" label="Hash" />
            </when>
        </conditional>
        <param name="tag" type="boolean" truevalue="--tag" falsevalue="" checked="false" label="Create a BSD-style checksum" />
    </inputs>
    <outputs>
        <data name="output" format="txt" />
    </outputs>
    <tests>
        <test expect_num_outputs="1">
            <param name="input" value="test-data/test.txt" ftype="txt" />
            <output name="output" ftype="txt" >
                <assert_contents>
                    <has_text text="53a8b4455d54e2d67c24c44763330338d65c883d9053d752710bc4e67e674b65" />
                </assert_contents>
            </output>
        </test>
    </tests>
    <help><![CDATA[
        GNU coreutils online help: <http://www.gnu.org/software/coreutils/>
    ]]></help>
    <citations>
        <citation type="doi">10.5281/zenodo.3364789</citation>
    </citations>
</tool>