Mercurial > repos > brinkmanlab > parsnp
comparison ParSNP.xml @ 3:2aeddc0a7b0e draft
planemo upload for repository https://github.com/brinkmanlab/galaxy-tools/tree/master/parsnp commit 90080c6d4e686ed46b3afb713f800e47596d9e53
author | brinkmanlab |
---|---|
date | Fri, 26 Aug 2022 02:50:17 +0000 |
parents | 22bf5b566ce2 |
children |
comparison
equal
deleted
inserted
replaced
2:22bf5b566ce2 | 3:2aeddc0a7b0e |
---|---|
67 #unless $adv.aligner == "muscle" | 67 #unless $adv.aligner == "muscle" |
68 -n '$adv.aligner' | 68 -n '$adv.aligner' |
69 #end unless | 69 #end unless |
70 | 70 |
71 ]]></command> | 71 ]]></command> |
72 <stdio> | |
73 <regex match="Parsnp requires 2 or more genomes to run, exiting" source="stderr" description="Parsnp requires 2 or more genomes to run"/> | |
74 </stdio> | |
72 <inputs> | 75 <inputs> |
73 <!-- Inputs --> | 76 <!-- Inputs --> |
74 <param name="genomes" type="data" multiple="true" argument="-d" format="fasta" label="Genomes/Contigs/Scaffolds" /> | 77 <param name="genomes" type="data" multiple="true" argument="-d" format="fasta" label="Genomes/Contigs/Scaffolds" /> |
75 <conditional name="ref_or_gbk"> | 78 <conditional name="ref_or_gbk"> |
76 <param name="ref_type" type="select" label="Reference type"> | 79 <param name="ref_type" type="select" label="Reference type"> |