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comparison peca.R @ 6:e16cd77cf9f7 draft

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planemo upload for repository https://github.com/caleb-easterly/galaxytools/peca
author caleb-easterly
date Mon, 26 Feb 2018 16:07:30 -0500
parents 5a39fa8a235a
children 19bb06146c2e
comparison
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5:5a39fa8a235a 6:e16cd77cf9f7
34 # run PECA_df 34 # run PECA_df
35 # id column is first column (hard-coded) 35 # id column is first column (hard-coded)
36 results <- PECA_df(quant_file, 36 results <- PECA_df(quant_file,
37 group1_names, 37 group1_names,
38 group2_names, 38 group2_names,
39 type=ttype,
40 id = df_names[1]) 39 id = df_names[1])
41 40
42 # put add protein names column 41 # put add protein names column
43 results$prot <- row.names(results) 42 results$prot <- row.names(results)
44 results <- results[, c("prot", "slr", "t", "score", "n", "p", "p.fdr")] 43 results <- results[, c("prot", "slr", "t", "score", "n", "p", "p.fdr")]