Mercurial > repos > card > rgi
comparison data_managers/data_manager_rgi_build_db/data_manager/rgi_database_builder.xml @ 2:a671367c326e draft
"planemo upload for repository https://github.com/arpcard/rgi commit 481838067117d0c8ae84bc92ee58f47cfc18aa5f"
author | card |
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date | Tue, 17 Nov 2020 00:23:36 +0000 |
parents | f96cbb663aa9 |
children | bfbfc24c5af2 |
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1:f96cbb663aa9 | 2:a671367c326e |
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1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
2 <tool id="rgi_database_builder" name="RGI Database Builder" tool_type="manage_data" version="1.0.0"> | 2 <tool id="rgi_database_builder" name="RGI Database Builder" tool_type="manage_data" version="1.1.0"> |
3 <description>Download and build the CARD database for RGI</description> | 3 <description>Download and build the CARD database for RGI</description> |
4 <requirements> | 4 <requirements> |
5 <requirement type="package" version="5.1.0">rgi</requirement> | 5 <requirement type="package" version="5.1.1">rgi</requirement> |
6 </requirements> | 6 </requirements> |
7 <stdio> | 7 <stdio> |
8 <exit_code description="Error" level="fatal" range="1:" /> | 8 <exit_code description="Error" level="fatal" range="1:" /> |
9 </stdio> | 9 </stdio> |
10 <command interpreter="python3"> | 10 <command> |
11 <![CDATA[ | 11 <![CDATA[ |
12 rgi_database_builder.py --out "${out_file}" | 12 python3 rgi_database_builder.py --out "${out_file}" |
13 #if $name: | 13 #if $name: |
14 --name "${name}" | 14 --name "${name}" |
15 #end if | 15 #end if |
16 #if $url: | 16 #if $url: |
17 --url "${url}" | 17 --url "${url}" |