diff cytosine_report_to_bedgraph/cytosine_report_to_bedgraph.xml @ 5:ee5badb527cd draft default tip

Uploaded

--- a/cytosine_report_to_bedgraph/cytosine_report_to_bedgraph.xml	Mon Nov 14 05:02:15 2016 -0500
+++ b/cytosine_report_to_bedgraph/cytosine_report_to_bedgraph.xml	Wed Nov 16 06:38:59 2016 -0500
@@ -90,7 +90,7 @@
     </data>
   </outputs>
 
-  <tests></tests>
+  <tests><!--TO DO --></tests>
 
   <help>
 <![CDATA[
@@ -98,7 +98,7 @@
 **What it does**
 
   | This tool takes as input a genome-wide cytosine methylation report (generated by the tool *Bismark Meth. Extractor*) and converts it into a bedGraph for each cytosine context (CpG, CHG and CHH). 
-  | These bedGraphs display, for a given context, the ratio of methylation of each covered cytosine in the genome.
+  | These bedGraphs display, for any given context, the ratio of methylation of each covered cytosine in the genome.
   |
   | It also produces a bedGraph displaying the coverage count of each cytosine in the genome (non-covered cytosine are ignored).
   | 
@@ -106,7 +106,7 @@
   .. class:: infomark
 
   | The tool outputs offer the possibility to vizualise the methylation signal of covered cytosines thanks to softwares like IGV (*Integrative Genomics Viewer*).
-  | In this respect, the tool can optionally generate a tdf binary file (*Tiled Data Format*) from each converted bedGraph. Tdf format is indeed better handled by IGV than bedGraph.
+  | In this respect, the tool can optionally generate a tdf binary file (*Tiled Data Format*) from each converted bedGraph ; tdf format is indeed better handled by IGV than bedGraph.
 ]]>
   </help>
-</tool>
\ No newline at end of file
+</tool>