Mercurial > repos > chmaramis > irprofiler

annotate test-data/clono_compute_def5_TCR_output1.csv @ 1:acaa8e8a0b88 draft default tip

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Uploaded test-data & added tool help
author chmaramis
date Mon, 30 Apr 2018 04:47:52 -0400
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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1 V-GENE D-GENE J-GENE AA JUNCTION Reads Reads/Total Frequency %
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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2 1 TRBV30 TRBD2 TRBJ1-1 CAAEGILAEAFF 4 4/20 20.0000
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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3 2 TRBV10-3 or TRBV6-1 or TRBV6-4 or TRBV6-5 or TRBV6-6 TRBD1 TRBJ1-1 CAAGPRAGTNTEAFF 2 2/20 10.0000
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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4 3 TRBV15 TRBD1 TRBJ1-1 CAAGGKRYTEAFF 2 2/20 10.0000
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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5 4 TRBV19 TRBD1 TRBJ1-5 CAAGEGEVRNQPQHF 2 2/20 10.0000
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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6 5 TRBV10-3 TRBD1 TRBJ1-1 CAACEGLNTEAFF 1 1/20 5.0000
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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7 6 TRBV10-3 or TRBV6-1 or TRBV6-4 or TRBV6-5 or TRBV6-6 TRBD2 TRBJ2-3 CAAGEDTQYF 1 1/20 5.0000
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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8 7 TRBV10-3 or TRBV6-1 or TRBV6-5 or TRBV6-6 TRBD1 TRBJ2-7 CAAGTGLSYEQYF 1 1/20 5.0000
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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9 8 TRBV12-3 or TRBV12-4 TRBD1 TRBJ2-5 CAAGTIETQYF 1 1/20 5.0000
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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10 9 TRBV25-1 TRBD2 TRBJ1-1 CAAGGGAPEAFF 1 1/20 5.0000
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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11 10 TRBV27 TRBD1 TRBJ1-5 CAAGPNQPQHF 1 1/20 5.0000
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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12 11 TRBV28 TRBD1 TRBJ2-7 CAAGGQGNSYEQYF 1 1/20 5.0000
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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13 12 TRBV3-1 TRBD1 TRBJ1-5 CAAGQGFGNQPQHF 1 1/20 5.0000
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
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14 13 TRBV30 TRBD1 TRBJ1-4 CAAGQVGEKLFF 1 1/20 5.0000
acaa8e8a0b88 Uploaded test-data & added tool help
chmaramis
parents:
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15 14 TRBV6-1 or TRBV6-5 or TRBV6-6 TRBD1 TRBJ1-1 CAADAQGGNTEAFF 1 1/20 5.0000