diff exclusive_clonotype_computation.xml @ 1:acaa8e8a0b88 draft default tip

Uploaded test-data & added tool help

--- a/exclusive_clonotype_computation.xml	Fri Mar 30 07:22:29 2018 -0400
+++ b/exclusive_clonotype_computation.xml	Mon Apr 30 04:47:52 2018 -0400
@@ -1,4 +1,4 @@
-<tool id="exclClonoComput" name="Exclusive Clonotypes" version="0.9">
+<tool id="exclClonoComput" name="Exclusive Clonotypes" version="1.0">
 <description>Compute exclusive clonotypes between 2 repertoires</description>
 <requirements>
       <requirement type="package" version="0.19">pandas</requirement>
@@ -13,13 +13,13 @@
         </param>
 	<conditional name="Th">
 	
-		<param name="thres_select" type="select" label="Remove CDR3 With Reads Fewer Than Threshold?">
+		<param name="thres_select" type="select" label="Remove Clonotypes With Reads Fewer Than Threshold?">
 			<option value="y">Yes</option>
 			<option value="n" selected="true">No</option>
 		</param>
 	
 		<when value="y">
-			<param name="thres" type="integer" size="4" value="1" min="1"  label="Keep CDR3 with Number of Reads more than"/>
+			<param name="thres" type="integer" size="4" value="1" min="1"  label="Keep Clonotypes with Number of Reads more than"/>
 		</when>
 	
 		<when value="n">
@@ -35,6 +35,6 @@
 <data format="tabular" name="output_file" label="exclusiveClonotypes"/>
 </outputs>
 <help>
-Coming soon
+This tool extracts the exclusive (i.e., found in the 1st dataset but not in the 2nd) clonotypes between 2 clonotype repertoires (1st output of the Clonotype Diversity &amp; Expression tool) according to 3 of the 5 supported clonotype definitions.
 </help>
 </tool>