diff test-data/gene_usage_geneJ_TCR_input1.csv @ 1:acaa8e8a0b88 draft default tip

Uploaded test-data & added tool help
author chmaramis
date Mon, 30 Apr 2018 04:47:52 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/gene_usage_geneJ_TCR_input1.csv	Mon Apr 30 04:47:52 2018 -0400
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+	J-GENE	AA JUNCTION	Reads	Reads/Total	Frequency %
+1	TRBJ2-3	CASSSTDTQYF	3569	3569/56731	6.2911
+2	TRBJ2-3	CASRLVPDTQYF	2898	2898/56731	5.1083
+3	TRBJ1-1	CASSLSGNTEAFF	673	673/56731	1.1863
+4	TRBJ2-1	CASSSFDEQFF	544	544/56731	0.9589
+5	TRBJ1-1	CASSEGGWTEAFF	399	399/56731	0.7033
+6	TRBJ2-3	CASSPGSTDTQYF	332	332/56731	0.5852
+7	TRBJ2-1	CASSEIGQGANEQFF	203	203/56731	0.3578
+8	TRBJ1-1	CASSVLGVMNTEAFF	182	182/56731	0.3208
+9	TRBJ2-7	CASSYMSSGSEQYF	105	105/56731	0.1851
+10	TRBJ2-1	CSAFLGGTQFF	104	104/56731	0.1833
+11	TRBJ2-3	CASSRTETQYF	95	95/56731	0.1675
+12	TRBJ1-1	CASSSRDPLNTEAFF	85	85/56731	0.1498
+13	TRBJ1-6	CASMGGLNIYNSPLHF	78	78/56731	0.1375
+14	TRBJ1-1	CASSEHGRAAEAFF	73	73/56731	0.1287
+15	TRBJ1-5	CASSVRRYSNQPQHF	69	69/56731	0.1216
+16	TRBJ1-1	CSASRGEEAFF	69	69/56731	0.1216
+17	TRBJ2-1	CASSKSGGAFNEQFF	63	63/56731	0.1111
+18	TRBJ2-1	CASSSPYANNEQFF	61	61/56731	0.1075
+19	TRBJ2-3	CASSLIPGQYQYF	59	59/56731	0.104
+20	TRBJ2-3	CASSFRTGFTDTQYF	55	55/56731	0.0969