Mercurial > repos > chmaramis > irprofiler

diff gene_computation.xml @ 1:acaa8e8a0b88 draft default tip

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Uploaded test-data & added tool help
author chmaramis
date Mon, 30 Apr 2018 04:47:52 -0400
parents 0e37e5b73273
children
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--- a/gene_computation.xml	Fri Mar 30 07:22:29 2018 -0400
+++ b/gene_computation.xml	Mon Apr 30 04:47:52 2018 -0400
@@ -1,8 +1,8 @@
-<tool id="geneComput" name="Gene Usage" version="0.9">
+<tool id="geneComput" name="Gene Usage" version="1.0">
     <description>Compute gene usage from clonotype file</description>
     <requirements>
       <requirement type="package" version="0.19">pandas</requirement>
-    </requirements>
+		</requirements>
     <command interpreter="python">gene_computation.py $input $gene $usage_file $top10_file $summary_file ${input.name}</command>
     <inputs>
         <param name="gene" type="select" label="Gene family">
@@ -17,6 +17,6 @@
         <data name="summary_file" format="tabular" label="${input.name}_geneUsageSummary" />
     </outputs>
     <help>
-Coming soon
+This tool caclulates the usage of each gene of the V or J family in a clonotype repertoire (1st output of the Clonotype Diversity &amp; Expression tool). 
   </help>
 </tool>