Mercurial > repos > chmaramis > irprofiler

diff test-data/gene_usage_geneJ_BCR_input1.csv @ 1:acaa8e8a0b88 draft default tip

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Uploaded test-data & added tool help
author chmaramis
date Mon, 30 Apr 2018 04:47:52 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/gene_usage_geneJ_BCR_input1.csv	Mon Apr 30 04:47:52 2018 -0400
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+	J-GENE	AA JUNCTION	Reads	Reads/Total	Frequency %
+1	IGHJ4	CTREEQYSSWYFDFW	191	191/240554	0.0794
+2	IGHJ6	CARGYYDSSGYYGVGQYYYYYMDVW	133	133/240554	0.0553
+3	IGHJ6	CARGMVRGVNYYYYYGMDVW	119	119/240554	0.0495
+4	IGHJ6	CARDRDLKDHHIAAAGSGYYYGMDVW	115	115/240554	0.0478
+5	IGHJ4	CARGTWYNDGWPHFDYW	107	107/240554	0.0445
+6	IGHJ3	CARSYYYGSGSYLAYAFDIW	104	104/240554	0.0432
+7	IGHJ4	CARDLGVLGYCSGGSCYSHVW	102	102/240554	0.0424
+8	IGHJ6	CASFPEQQLKWYGMDVW	101	101/240554	0.042
+9	IGHJ3	CASTESGGYYFDAFDIW	97	97/240554	0.0403
+10	IGHJ4	CARVLGDSFDYW	97	97/240554	0.0403
+11	IGHJ4	CATITMAYYFDYW	95	95/240554	0.0395
+12	IGHJ4	CARDPRSGYDFDYW	95	95/240554	0.0395
+13	IGHJ6	CARGGGSYPYYYYGMDVW	93	93/240554	0.0387
+14	IGHJ3	CARDHSTAEDAFDIW	92	92/240554	0.0382
+15	IGHJ4	CARDGGQLGIYFDYW	89	89/240554	0.037
+16	IGHJ6	CARDGYDSSGYYVGGALRLGVLQSYYGMDVW	88	88/240554	0.0366
+17	IGHJ4	CATDPARITDTDYW	88	88/240554	0.0366
+18	IGHJ3	CARVRELDAFDIW	88	88/240554	0.0366
+19	IGHJ4	CARGLPRPYSGSYSGFDYW	88	88/240554	0.0366
+20	IGHJ4	CARAGRVTMIVVVIKPLDYW	87	87/240554	0.0362