comparison manipulate/minimal_kcf/minimal_kcf.xml @ 0:89592faa2875 draft

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0:89592faa2875

<tool id="glytools_minimal_KCF" name="GAP Minimal KCF" version="0.3">
    <description>Keep only ENTRY, NODE, EDGE content</description>
    <requirements>
        <requirement type="package" version="1.0">python_for_glycan_tools</requirement>
    </requirements> 
    <command interpreter="python"><![CDATA[ minimal_kcf.py -i $input -o $kcfoutput ]]></command>
    <inputs>
        <param format="kcf" name="input" type="data" label="KCF source file"/>
    </inputs>
    <outputs>
        <data format="kcf" name="kcfoutput" label="Minimal KCF $input.name"/>
    </outputs>

 <citations>
     <!--  -->
     <citation type="doi">10.1002/0471250953.bi0112s38</citation>
  </citations>

    <help> <![CDATA[ 
.. class:: infomark

**What this tool does**

This tool reads KCF glycans and removes all additional data which may cause tools to malfunction. For instance REFERENCE, DBLINKS, MASS etc. Only ENTRY, NODE and EDGE entries are kept


.. class:: infomark

**Input**

*KCF*

.. class:: infomark

**Output**

*KCF*

]]>
    </help>

</tool>