Mercurial > repos > chrisd > snipfinder

diff tool_dependencies.xml @ 0:d9be5a7e70f5 draft

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planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/snpfinder commit 8b7c17352f46ab4fce3bc13c3e63d4021fe83ae7
author chrisd
date Wed, 23 Mar 2016 18:04:21 -0400
parents
children c5085b1ad596
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Wed Mar 23 18:04:21 2016 -0400
@@ -0,0 +1,19 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="snp_caller" version="0.1">
+        <install version="1.0">
+            <actions>
+                <action type="shell_command">git clone --recursive https://github.com/ChrisD11/snp_caller.git</action>
+                <action type="shell_command">make</action>
+                <action type="move_file">
+                    <source>snp</source>
+                    <destination>$INSTALL_DIR/bin</destination>
+                </action>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>Compiling snp finder requires a C++ compiler</readme>
+    </package>
+</tool_dependency>