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1 <tool id="listGff" name="listGff">
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2 <description> List and count features (column 3) of a gff file </description>
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3 <command interpreter="sh">
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4 listGff.sh $referenciesFile > $outputFile
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5 </command>
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6
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7 <inputs>
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8 <param name="referenciesFile" type="data" label="Input File" format="gff" />
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9 </inputs>
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10
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11 <outputs>
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12 <data format="txt" name="outputFile" label="[listGff] Output File"/>
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13 </outputs>
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14
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15 <tests>
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16 <test>
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17 <param name="referenciesFile" value="listGff_Reference.gff" />
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18 <output name="outputFile" file="listGff_Results.txt" />
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19 </test>
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20 </tests>
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1
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21
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22 <help>
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23
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24 </help>
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25 </tool>
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