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view detrprok_scripts/listGff.xml @ 0:a53eb951b164 draft

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author clairetn
date Mon, 25 Mar 2013 05:39:29 -0400
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children 2d99d84922c7
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<tool id="listGff" name="listGff">
	<description> List and count features (column 3) of a gff file </description>
		<command interpreter="sh"> 
			listGff.sh $referenciesFile > $outputFile  
		</command>

	<inputs>
		<param name="referenciesFile" type="data" label="Referencies Input File" format="gff" />
	</inputs>

	<outputs>
		<data format="txt" name="outputFile" label="[listGff] Output File"/>
	</outputs>

        <tests>
                <test>
                        <param name="referenciesFile" value="listGff_Reference.gff" />
                        <output name="outputFile" file="listGff_Results.txt" />
                </test>
        </tests>
</tool>