Mercurial > repos > climate > cds_essential_variability
annotate essential_climate_variables.xml @ 5:ee42b7a33dc7 draft default tip
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
author | climate |
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date | Tue, 08 Jun 2021 08:58:04 +0000 |
parents | b261160f10ee |
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rev | line source |
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5
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
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changeset
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1 <tool id="cds_essential_variability" name="Copernicus Essential Climate Variables" version="0.2.0" profile="20.05"> |
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5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
climate
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2 <description>for assessing climate variability</description> |
5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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3 <requirements> |
5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
climate
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4 <requirement type="package" version="3">python</requirement> |
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ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
climate
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5 <requirement type="package" version="0.5.1">cdsapi</requirement> |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
climate
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6 <requirement type="package" version="1.9.10">cdo</requirement> |
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5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
climate
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7 </requirements> |
5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
climate
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8 <command detect_errors="exit_code"><![CDATA[ |
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ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
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9 export HOME=`pwd` && |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
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10 #set $cdsapirc_file = os.environ.get('COPERNICUS_CDSAPIRC_KEY_FILE', '') |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
climate
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11 #if os.path.isfile(str($cdsapirc_file)) |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
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12 echo "xx $cdsapirc_file xx" && |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
climate
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13 cp $cdsapirc_file .cdsapirc && |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
climate
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14 #else |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
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15 echo 'use tool cdsapirc file' && |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
climate
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16 cp '$__tool_directory__/cdsapirc.cfg' .cdsapirc && |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
climate
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17 #end if |
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5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
climate
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18 python3 '$__tool_directory__/ecv_retrieve.py' |
5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
climate
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19 'ecv-for-climate-change' '$variable' |
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b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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20 --month '$month' |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
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21 #if str($product_type.product) == 'monthly_mean' |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
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22 --year '$product_type.year' |
5
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
climate
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23 --time_aggregation '1_month_mean' |
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b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
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24 #else if str($product_type.product) == 'anomaly' |
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ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
climate
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25 --climate_reference_period $product_type.climate_reference_period |
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b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
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26 --time_aggregation '$product_type.selector' |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
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27 --year '$product_type.year' |
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5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
climate
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28 #else |
5
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
climate
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29 --climate_reference_period $product_type.climate_reference_period |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
climate
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30 --time_aggregation '1_month_mean' |
0
5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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31 #end if |
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b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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32 --product_type '$product_type.product' |
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5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
climate
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33 --format 'tgz' --output 'tmp.tgz' |
5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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34 --verbose && |
5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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35 tar zxvf tmp.tgz && |
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b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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36 cat *.grib > tmpg.grib && |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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37 cdo remapcon,$adv.resol -setgridtype,regular tmpg.grib tmp.grib && |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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38 cdo -f nc -t ecmwf copy tmp.grib tmp.nc |
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5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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39 ]]></command> |
5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
climate
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40 <inputs> |
5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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41 <param name="variable" type="select" multiple="true" label="Variable(s)"> |
5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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42 <option value="surface_air_temperature" selected="true">Surface air temperature</option> |
5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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43 <option value="surface_air_relative_humidity" selected="true">Surface air relative humidity</option> |
5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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44 <option value="0_7cm_volumetric_soil_moisture" selected="true">0-7cm volumetric soil moisture</option> |
5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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45 <option value="precipitation" selected="true">Precipitation</option> |
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b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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46 <option value="sea_ice_cover" selected="true">Sea-ice cover</option> |
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5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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47 </param> |
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b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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48 <conditional name="product_type"> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
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49 <param name="product" type="select" label="Select type of data"> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
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50 <option value="monthly_mean" selected="true">Monthly mean</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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51 <option value="climatology">Climatology</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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52 <option value="anomaly">Anomaly</option> |
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5c0ab9932311
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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53 </param> |
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ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
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54 <when value="climatology"> |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
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55 <param name="climate_reference_period" type="select" multiple="false" label="Select Climate reference period"> |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
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56 <option value="1981_2010" selected="true">1981-2010</option> |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
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57 <option value="1991_2020">1991-2020</option> |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
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58 </param> |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
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59 </when> |
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b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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60 <when value="monthly_mean"> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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61 <param name="year" type="select" multiple="true" label="Select year(s)"> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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62 <option value="1979">1979</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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63 <option value="1980">1980</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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64 <option value="1981">1981</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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65 <option value="1982">1982</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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66 <option value="1983">1983</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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67 <option value="1984">1984</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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68 <option value="1985">1985</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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69 <option value="1986">1986</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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70 <option value="1987">1987</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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71 <option value="1988">1988</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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72 <option value="1989">1989</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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73 <option value="1990">1990</option> |
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climate
parents:
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74 <option value="1991">1991</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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75 <option value="1992">1992</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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76 <option value="1993">1993</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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77 <option value="1994">1994</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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78 <option value="1995">1995</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
1
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79 <option value="1996">1996</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
1
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80 <option value="1997">1997</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
1
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81 <option value="1998">1998</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
1
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82 <option value="1999">1999</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
1
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83 <option value="2000">2000</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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84 <option value="2001">2001</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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85 <option value="2002">2002</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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86 <option value="2003">2003</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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87 <option value="2004">2004</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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88 <option value="2005">2005</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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89 <option value="2006">2006</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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90 <option value="2007">2007</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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91 <option value="2008">2008</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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92 <option value="2009">2009</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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93 <option value="2010">2010</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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94 <option value="2011">2011</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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95 <option value="2012">2012</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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96 <option value="2013">2013</option> |
b9d9fe0c2ce7
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climate
parents:
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97 <option value="2014">2014</option> |
b9d9fe0c2ce7
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climate
parents:
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98 <option value="2015">2015</option> |
b9d9fe0c2ce7
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climate
parents:
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99 <option value="2016">2016</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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100 <option value="2017">2017</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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101 <option value="2018">2018</option> |
5
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
climate
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102 <option value="2019">2019</option> |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
climate
parents:
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103 <option value="2020" selected="true">2020</option> |
2
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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104 </param> |
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105 </when> |
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106 <when value="anomaly"> |
5
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
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107 <param name="climate_reference_period" type="select" multiple="false" label="Select Climate reference period"> |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
climate
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108 <option value="1981_2010" selected="true">1981-2010</option> |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
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109 <option value="1991_2020">1991-2020</option> |
ee42b7a33dc7
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 9a008dba390aef21d4ab61240641bf455f5bb036"
climate
parents:
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110 </param> |
2
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climate
parents:
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111 <param name="year" type="select" multiple="true" label="Select year(s)"> |
b9d9fe0c2ce7
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parents:
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112 <option value="1979">1979</option> |
b9d9fe0c2ce7
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parents:
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113 <option value="1980">1980</option> |
b9d9fe0c2ce7
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parents:
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114 <option value="1981">1981</option> |
b9d9fe0c2ce7
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climate
parents:
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115 <option value="1982">1982</option> |
b9d9fe0c2ce7
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climate
parents:
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116 <option value="1983">1983</option> |
b9d9fe0c2ce7
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climate
parents:
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117 <option value="1984">1984</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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118 <option value="1985">1985</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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119 <option value="1986">1986</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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120 <option value="1987">1987</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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121 <option value="1988">1988</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
1
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122 <option value="1989">1989</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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123 <option value="1990">1990</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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124 <option value="1991">1991</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
1
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125 <option value="1992">1992</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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126 <option value="1993">1993</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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127 <option value="1994">1994</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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128 <option value="1995">1995</option> |
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planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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129 <option value="1996">1996</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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130 <option value="1997">1997</option> |
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planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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131 <option value="1998">1998</option> |
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planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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parents:
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132 <option value="1999">1999</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
1
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133 <option value="2000">2000</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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134 <option value="2001">2001</option> |
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planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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135 <option value="2002">2002</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
1
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136 <option value="2003">2003</option> |
b9d9fe0c2ce7
planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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137 <option value="2004">2004</option> |
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planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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138 <option value="2005">2005</option> |
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planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents:
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139 <option value="2006">2006</option> |
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climate
parents:
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140 <option value="2007">2007</option> |
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climate
parents:
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141 <option value="2008">2008</option> |
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climate
parents:
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142 <option value="2009">2009</option> |
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climate
parents:
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143 <option value="2010">2010</option> |
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parents:
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144 <option value="2011">2011</option> |
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climate
parents:
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145 <option value="2012">2012</option> |
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climate
parents:
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146 <option value="2013">2013</option> |
b9d9fe0c2ce7
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parents:
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147 <option value="2014">2014</option> |
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climate
parents:
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148 <option value="2015">2015</option> |
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149 <option value="2016">2016</option> |
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150 <option value="2017">2017</option> |
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151 <option value="2018">2018</option> |
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152 <option value="2019">2019</option> |
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153 <option value="2020" selected="true">2020</option> |
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154 </param> |
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155 <param name="selector" type="select" label="Time aggregation"> |
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156 <option value="12_month_running_mean" selected="true">yearly</option> |
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157 <option value="1_month_mean">monthly</option> |
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158 </param> |
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159 </when> |
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160 </conditional> |
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161 <param name="month" type="select" multiple="true" label="Select month(s)"> |
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162 <option value="01" selected="true">January</option> |
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163 <option value="02" selected="true">February</option> |
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164 <option value="03" selected="true">March</option> |
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165 <option value="04" selected="true">April</option> |
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166 <option value="05" selected="true">May</option> |
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167 <option value="06" selected="true">June</option> |
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168 <option value="07" selected="true">July</option> |
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169 <option value="08" selected="true">August</option> |
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170 <option value="09" selected="true">September</option> |
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171 <option value="10" selected="true">October</option> |
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172 <option value="11" selected="true">November</option> |
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173 <option value="12" selected="true">December</option> |
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174 </param> |
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175 |
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176 <section name="adv" title="Advanced Options" expanded="false"> |
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177 <param name="resol" type="select" label="Resolution"> |
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178 <option value="r1440x720" selected="true">high</option> |
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179 <option value="r144x72">low</option> |
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180 </param> |
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181 </section> |
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182 </inputs> |
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183 <outputs> |
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184 <data name="ofilename" format="netcdf" from_work_dir="tmp.nc"/> |
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185 </outputs> |
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186 <tests> |
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187 <test> |
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188 <param name="variable" value="0_7cm_volumetric_soil_moisture"/> |
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189 <conditional name="product_type"> |
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190 <param name="product" value="monthly_mean"/> |
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191 <param name="year" value="2018"/> |
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192 </conditional> |
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193 <param name="month" value="12"/> |
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194 <param name="resol" value="r144x72"/> |
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195 <output name="ofilename" ftype="netcdf" file="soil_moisture.nc" compare="sim_size" delta="100"/> |
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196 </test> |
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197 <test> |
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198 <param name="variable" value="precipitation"/> |
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199 <conditional name="product_type"> |
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200 <param name="product" value="anomaly"/> |
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201 <param name="year" value="2017"/> |
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202 <param name="time_aggregation" value="12_month"/> |
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203 </conditional> |
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204 <param name="month" value="12"/> |
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205 <param name="resol" value="r144x72"/> |
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206 <output name="ofilename" ftype="netcdf" file="prep_seaice.nc" compare="sim_size" delta="100"/> |
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207 </test> |
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208 </tests> |
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209 <help><![CDATA[ |
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210 |
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211 **Copernicus Essential climate variables for assessment of climate variability from 1979 to present** |
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212 ======================================================================================================= |
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213 |
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214 This tool is a wrapper to retrieve Copernicus Essential Climate Variables. |
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215 It corresponds to the European Contribution to the Monitoring of Essential Climate Variables from Space. |
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216 An Essential Climate Variable is a physical, chemical or biological variable or a group of linked variables |
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217 that critically contributes to the characterization of Earth’ s climate. |
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218 |
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219 The Essential Climate Variables for assessment of climate variability from 1979 to present dataset contains |
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220 a selection of climatologies and monthly anomalies of Essential Climate Variables (ECVs) suitable for |
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221 monitoring and assessment of climate variability and change. Selection criteria are based on accuracy |
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222 and temporal consistency on monthly to decadal time scales. The ECV data products in this set have been |
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223 estimated from multiple sources and, depending on the source, may have been adjusted to account for biases |
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224 and other known deficiencies. Data sources and adjustment methods used are described in the Product User |
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225 Guide, as are various particulars such as the baseline periods used to calculate monthly climatologies and |
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226 the corresponding anomalies. |
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227 |
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228 |
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229 - ECV: https://gcos.wmo.int/en/essential-climate-variables |
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230 - Copernicus Climate Data Store documentation on Essential Climate Variables: |
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231 https://cds.climate.copernicus.eu/cdsapp#!/dataset/ecv-for-climate-change?tab=overview |
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232 |
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233 See climatedata.wmo.int/ for more information on Essential Climate Variables. |
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234 |
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235 .. class:: infomark |
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236 |
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237 It allows to retrieve estimates of Essential Climate Variables (ECVs) |
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238 derived from Earth observations. |
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239 |
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240 License: |
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241 ~~~~~~~~ |
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242 Copernicus License V1.1 |
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243 |
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244 Generated using Copernicus Climate Change Service information [2019]. |
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245 Neither the European Commission nor ECMWF is responsible for any use |
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246 that may be made of the Copernicus information or data it contains. |
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247 |
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248 ]]></help> |
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249 <citations> |
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250 <citation type="doi">10.1002/qj.828</citation> |
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251 <citation type="doi">10.1002/qj.2949</citation> |
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252 </citations> |
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253 <edam_topics> |
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254 <edam_topic>topic_3855</edam_topic> |
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255 <edam_topic>topic_3318</edam_topic> |
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256 </edam_topics> |
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257 <edam_operations> |
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258 <edam_operation>operation_2422</edam_operation> |
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259 <edam_operation>operation_3357</edam_operation> |
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260 <edam_operation>operation_0335</edam_operation> |
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261 </edam_operations> |
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262 </tool> |