Mercurial > repos > climate > ctsm_fates
annotate ctsm-fates.xml @ 3:efaa93ed5a79 draft default tip
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
author | climate |
---|---|
date | Thu, 17 Dec 2020 14:33:35 +0000 |
parents | 74b675f9d7c8 |
children |
rev | line source |
---|---|
3
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
1 <tool id="ctsm_fates" name="CTSM/FATES-EMERALD" version="2.0.1.1"> |
0
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
2 <description>Functionally Assembled Terrestrial Ecosystem Simulator</description> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
3 <requirements> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
4 <requirement type="package" version="2.0.1">fates-emerald</requirement> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
5 <requirement type="package" version="1.32">tar</requirement> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
6 <requirement type="package" version="2.35">binutils</requirement> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
7 <requirement type="package" version="3">python</requirement> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
8 <requirement type="package" version="2.0132">perl-xml-libxml</requirement> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
9 </requirements> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
10 <command detect_errors="exit_code"><![CDATA[ |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
11 ( export HOME=`pwd` && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
12 export USER='jovyan' && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
13 mkdir -p .cime && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
14 cp '$__tool_directory__/config' .cime/config && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
15 cp '$__tool_directory__/config_compilers.xml' '.cime/config_compilers.xml' && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
16 cp '$__tool_directory__/config_machines.xml' '.cime/config_machines.xml' && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
17 mkdir inputdata && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
18 tar -xf '$inputdata' -C 'inputdata/' && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
19 mkdir output_dir && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
20 mkdir usermods_dirs && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
21 #if str($adv.condi_user_mods).strip() == 'yes' |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
22 # should create a new type user_mods.tar |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
23 cd usermods_dirs && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
24 tar xf '$user_mods' && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
25 cd .. && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
26 #end if |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
27 create_newcase --case '$casename' --compset 2000_DATM%1PTGSWP3_CLM50%FATES_SICE_SOCN_MOSART_SGLC_SWAV --machine espresso --run-unsupported |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
28 #if str($adv.condi_user_mods).strip() == 'yes' |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
29 --user-mods-dir usermods_dirs |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
30 #end if |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
31 --res '$resolution' && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
32 cd '$casename' && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
33 ./case.setup > $case_info 2>&1 && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
34 #if (str($adv_period.condi_type_run.run_type) == 'hybrid' or str($adv_period.condi_type_run.run_type) == 'branch') |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
35 ./xmlchange RUN_TYPE=$adv_period.condi_type_run.run_type && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
36 ./xmlchange RUN_REFDATE=$adv_period.condi_type_run.run_refdate && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
37 ./xmlchange RUN_REFCASE=$adv_period.condi_type_run.run_refcase && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
38 #end if |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
39 #if ((str($adv_period.condi_type_run.run_type) == 'hybrid' or str($adv_period.condi_type_run.run_type) == 'startup') and ($adv_period.condi_type_run.run_startdate != '')) |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
40 ./xmlchange RUN_STARTDATE=$adv_period.condi_type_run.run_startdate && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
41 #end if |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
42 ./xmlchange STOP_N=$adv_period.stopn && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
43 ./xmlchange STOP_OPTION=$adv_period.stop_option && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
44 ./xmlchange CCSM_CO2_PPMV=$adv.co2 && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
45 ./xmlchange DOUT_S=FALSE && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
46 cp '$user_nl_clm_customization' user_nl_clm && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
47 ./case.build >> $case_info 2>&1 && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
48 #if (str($adv_period.condi_type_run.run_type) == 'hybrid' or str($adv_period.condi_type_run.run_type) == 'branch') |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
49 tar -xf '$adv_period.condi_type_run.restart' -C '../work/$casename/run/' && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
50 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
51 #end if |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
52 ./case.submit >> $case_info 2>&1 && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
53 mkdir -p restart && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
54 (cat '../work/$casename/run/rpointer'.* > $rinfo || printf "No restarts\n") && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
55 (cp '../work/$casename/run/$casename'.*.r*.*.nc restart/ || printf "No netCDF restarts\n") && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
56 (cp '../work/$casename/run/$casename'.*.r*.*.bin restart/ || printf "No bin restarts\n") && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
57 (cp '../work/$casename/run/rpointer'.* restart/ || printf "no rpointer\n") && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
58 cd restart && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
59 tar cvf $restart . && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
60 cd .. && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
61 (cp '../work/$casename/run/$casename'.*.h*.*.nc ../output_dir/ || printf "no netCDF outputs\n") && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
62 (gunzip '../work/$casename/run/'*.log.* || printf "no compressed logs") && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
63 cat '../work/$casename/run/'atm.log.* >> $atm_log && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
64 cat '../work/$casename/run/'cesm.log.* >> $cesm_log && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
65 cat '../work/$casename/run/'cpl.log.* >> $cpl_log && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
66 cat '../work/$casename/run/'lnd.log.* >> $lnd_log && |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
67 cat '../work/$casename/run/'rof.log.* >> $rof_log ) || |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
68 (printf "Case failed" && tar cf $work \${HOME}/work) |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
69 ]]></command> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
70 <configfiles> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
71 <configfile name="user_nl_clm_customization"><![CDATA[ |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
72 &clm_inparm |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
73 hist_mfilt = 120, |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
74 use_fates = .true., |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
75 fates_spitfire_mode = $adv_clm.fates_spitfire_mode, |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
76 use_fates_planthydro = $adv_clm.use_fates_planthydro, |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
77 use_fates_cohort_age_tracking = $adv_clm.use_fates_cohort_age_tracking, |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
78 use_fates_ed_st3 = $adv_clm.use_fates_ed_st3, |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
79 use_fates_ed_prescribed_phys = $adv_clm.use_fates_ed_prescribed_phys, |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
80 use_fates_logging = $adv_clm.use_fates_logging, |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
81 use_fates_fixed_biogeog = $adv_clm.use_fates_fixed_biogeog, |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
82 #if (str($adv_clm.fates_parteh_mode).strip() != '') |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
83 fates_parteh_mode = $adv_clm.fates_parteh_mode |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
84 #end if |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
85 / |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
86 ]]> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
87 </configfile> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
88 </configfiles> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
89 <inputs> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
90 <param name="inputdata" type="data" format='tar' label="inputdata for running FATES EMERALD"></param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
91 <param name="casename" type="text" value="usecase" label="Name of your case"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
92 <validator type="regex" message="start with a letter and no blanks">^[A-Za-z][A-Za-z0-9]*</validator> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
93 </param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
94 <param name="resolution" type="select" label="Model resolution"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
95 <option value="1x1_ALP1">ALP1</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
96 <option value="1x1_ALP2">ALP2</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
97 <option value="1x1_ALP3">ALP3</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
98 <option value="1x1_ALP4">ALP4</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
99 <option value="1x1_SUB1">SUB1</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
100 <option value="1x1_SUB2">SUB2</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
101 <option value="1x1_SUB3">SUB3</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
102 <option value="1x1_SUB4">SUB4</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
103 <option value="1x1_BOR1">BOR1</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
104 <option value="1x1_BOR2">BOR2</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
105 <option value="1x1_BOR3">BOR3</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
106 <option value="1x1_BOR4">BOR4</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
107 <option value="1x1_LYG">LYG</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
108 <option value="1x1_BUO">BUO</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
109 <option value="1x1_HAV">HAV</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
110 <option value="1x1_SKO">SKO</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
111 <option value="1x1_VIKE">VIKE</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
112 <option value="1x1_LIAH">LIAH</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
113 <option value="1x1_FINN">FINN</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
114 </param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
115 <section name="adv_period" title="Customize the model run period" expanded="false"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
116 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
117 <conditional name="condi_type_run"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
118 <param name="run_type" type="select" label="Determines the model run initialization type."> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
119 <option value="startup" selected="true">startup</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
120 <option value="hybrid">hybrid</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
121 <option value="branch">branch</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
122 </param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
123 <when value="startup"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
124 <param name="run_startdate" type="text" value="" label="Run start date (yyyy-mm-dd). Only used for startup or hybrid runs."> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
125 <validator type="regex" message="YYYY-MM-DD">(^$|(\d{4}-(0[1-9]|1[0-2])-(0[1-9]|[12]\d|3[01])))</validator> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
126 </param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
127 </when> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
128 <when value="branch"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
129 <param name="run_refcase" type="text" value="" label="Reference case for hybrid or branch runs"></param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
130 <param name="run_refdate" type="text" value="" label="Reference date for hybrid or branch runs (yyyy-mm-dd)"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
131 <validator type="regex" message="YYYY-MM-DD">(^$|(\d{4}-(0[1-9]|1[0-2])-(0[1-9]|[12]\d|3[01])))</validator> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
132 </param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
133 <param name="restart" type="data" format='tar' label="restart for running FATES EMERALD"></param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
134 </when> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
135 <when value="hybrid"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
136 <param name="run_refcase" type="text" value="" label="Reference case for hybrid or branch runs"></param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
137 <param name="run_refdate" type="text" value="" label="Reference date for hybrid or branch runs (yyyy-mm-dd)"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
138 <validator type="regex" message="YYYY-MM-DD">(^$|(\d{4}-(0[1-9]|1[0-2])-(0[1-9]|[12]\d|3[01])))</validator> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
139 </param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
140 <param name="run_startdate" type="text" value="" label="Run start date (yyyy-mm-dd). Only used for startup or hybrid runs."> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
141 <validator type="regex" message="YYYY-MM-DD">(^$|(\d{4}-(0[1-9]|1[0-2])-(0[1-9]|[12]\d|3[01])))</validator> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
142 </param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
143 <param name="restart" type="data" format='tar' label="restart for running FATES EMERALD"></param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
144 </when> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
145 </conditional> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
146 <param name="stopn" type="integer" value="5" label="Provides a numerical count for STOP_OPTION."></param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
147 <param name="stop_option" type="select" label=" Sets the run length along with STOP_N and STOP_DATE"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
148 <option value="ndays" selected="true">ndays</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
149 <option value="none">none</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
150 <option value="never">never</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
151 <option value="nsteps">nsteps</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
152 <option value="nseconds">nseconds</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
153 <option value="nminutes">nminutes</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
154 <option value="nhours">nhours</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
155 <option value="nday">ndays</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
156 <option value="nmonths">nmonths</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
157 <option value="nyears">nyears</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
158 <option value="date">date</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
159 <option value="ifdays0">ifday0</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
160 <option value="end">end</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
161 </param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
162 </section> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
163 <section name="adv_clm" title="CLM namelist customization" expanded="false"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
164 <param name="use_fates_planthydro" type="boolean" label="Toggle to turn on plant hydraulics" truevalue=".true." falsevalue=".false." checked="false"/> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
165 <param name="use_fates_cohort_age_tracking" type="boolean" label="Toggle to turn on cohort age tracking" truevalue=".true." falsevalue=".false." checked="false"/> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
166 <param name="use_fates_ed_st3" type="boolean" label="Toggle to turn on Static Stand Structure Mode" truevalue=".true." falsevalue=".false." checked="false"/> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
167 <param name="use_fates_ed_prescribed_phys" type="boolean" label="Toggle to turn on prescribed physiology" truevalue=".true." falsevalue=".false." checked="false"/> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
168 <param name="use_fates_logging" type="boolean" label="Toggle to turn on the logging module" truevalue=".true." falsevalue=".false." checked="false"/> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
169 <param name="use_fates_fixed_biogeog" type="boolean" label="Toggle to turn on fixed biogeography mode" truevalue=".true." falsevalue=".false." checked="false"/> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
170 <param name="fates_spitfire_mode" type="select" label="Spitfire module to simulate fire"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
171 <option value="0" selected="true">None</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
172 <option value="1">Use a global constant lightning rate found in fates_params</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
173 <option value="2">Use an external lightning dataset</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
174 <option value="3">Use an external confirmed ignitions dataset</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
175 <option value="4">Use external lightning and population datasets to simulate both natural and anthropogenic ignitions</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
176 </param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
177 <param name="fates_parteh_mode" type="select" label="Switch deciding which nutrient model to use in FATES"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
178 <option value="" selected="true">None</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
179 <option value="1">1</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
180 <option value="2">2</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
181 </param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
182 </section> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
183 <section name="adv" title="Advanced customization" expanded="false"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
184 <param name="co2" type="float" value="367.0" label="Atmospheric CO2 molar ratio (by volume) only used when co2_type==constant (umol/mol)"></param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
185 <conditional name="condi_user_mods"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
186 <param name="add_changes" type="select" label="user-modified source code"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
187 <option value="no" selected="true">no</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
188 <option value="yes">yes</option> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
189 </param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
190 <when value="yes"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
191 <param name="usermods" type="data" format="tar" label="SourceMods"></param> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
192 </when> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
193 <when value="no"/> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
194 </conditional> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
195 </section> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
196 </inputs> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
197 <outputs> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
198 <collection name="history_files" type="list" label="${tool.name} on ${inputdata.name} (history file)"> |
3
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
199 <discover_datasets pattern="__name__" directory="output_dir" visible="true" format="netcdf"/> |
0
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
200 </collection> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
201 <data name="atm_log" format="txt" label="${tool.name} on ${inputdata.name} (atm.log)"/> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
202 <data name="cesm_log" format="txt" label="${tool.name} on ${inputdata.name} (cesm.log)"/> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
203 <data name="cpl_log" format="txt" label="${tool.name} on ${inputdata.name} (cpl.log)"/> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
204 <data name="lnd_log" format="txt" label="${tool.name} on ${inputdata.name} (lnd.log)"/> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
205 <data name="rof_log" format="txt" label="${tool.name} on ${inputdata.name} (rof.log)"/> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
206 <data name="restart" format="tar" label="${tool.name} on ${inputdata.name} (restart)"></data> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
207 <data name="case_info" format="txt" label="${tool.name} on ${inputdata.name} (case info)"></data> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
208 <data name="rinfo" format="txt" label="${tool.name} on ${inputdata.name} (restart info)"></data> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
209 <data name="work" format="tar" label="${tool.name} on ${inputdata.name} (workdir)"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
210 </data> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
211 </outputs> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
212 <tests> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
213 <test> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
214 <param name="inputdata" value="inputdata_test.tar" /> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
215 <param name="casename" value="test" /> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
216 <param name="resolution" value="1x1_ALP1" /> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
217 <param name="run_startdate" value="2000-01-01" /> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
218 <param name="stop_option" value="nsteps" /> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
219 <param name="stopn" value="1" /> |
3
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
220 <output name="atm_log" ftype="txt"> |
0
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
221 <assert_contents> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
222 <has_text text="(datm_comp_final) atm: end of main integration loop" /> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
223 </assert_contents> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
224 </output> |
3
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
225 <output name="cesm_log" ftype="txt"> |
0
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
226 <assert_contents> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
227 <has_text text="pes participating in computation for CLM" /> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
228 </assert_contents> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
229 </output> |
3
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
230 <output name="cpl_log" ftype="txt"> |
0
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
231 <assert_contents> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
232 <has_text text="SUCCESSFUL TERMINATION" /> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
233 </assert_contents> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
234 </output> |
3
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
235 <output name="lnd_log" ftype="txt"> |
0
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
236 <assert_contents> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
237 <has_text text="Successfully" /> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
238 </assert_contents> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
239 </output> |
3
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
240 <output name="rof_log" ftype="txt"> |
0
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
241 <assert_contents> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
242 <has_text text="MOSART model initialization" /> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
243 </assert_contents> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
244 </output> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
245 <output name="restart" ftype="tar" file="restart.tar" compare="sim_size" delta="100" /> |
3
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
246 <output name="rinfo" ftype="txt"> |
0
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
247 <assert_contents> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
248 <has_text text="datm.r.2000-01-01-01800.nc" /> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
249 <has_text text="datm.rs1.2000-01-01-01800.bin" /> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
250 <has_text text="cpl.r.2000-01-01-01800.nc" /> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
251 <has_text text="clm2.r.2000-01-01-01800.nc" /> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
252 </assert_contents> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
253 </output> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
254 <output_collection name="history_files" count="0"> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
255 </output_collection> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
256 </test> |
3
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
257 <test> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
258 <param name="inputdata" value="inputdata_test.tar" /> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
259 <param name="casename" value="one_month" /> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
260 <param name="resolution" value="1x1_ALP1" /> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
261 <param name="stop_option" value="nmonths" /> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
262 <param name="stopn" value="1" /> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
263 <output name="atm_log" ftype="txt"> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
264 <assert_contents> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
265 <has_text text="(datm_comp_final) atm: end of main integration loop" /> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
266 </assert_contents> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
267 </output> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
268 <output name="cesm_log" ftype="txt"> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
269 <assert_contents> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
270 <has_text text="pes participating in computation for CLM" /> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
271 </assert_contents> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
272 </output> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
273 <output name="cpl_log" ftype="txt"> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
274 <assert_contents> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
275 <has_text text="SUCCESSFUL TERMINATION" /> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
276 </assert_contents> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
277 </output> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
278 <output name="lnd_log" ftype="txt"> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
279 <assert_contents> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
280 <has_text text="Successfully" /> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
281 </assert_contents> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
282 </output> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
283 <output name="rof_log" ftype="txt"> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
284 <assert_contents> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
285 <has_text text="MOSART model initialization" /> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
286 </assert_contents> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
287 </output> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
288 <output name="restart" ftype="tar"> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
289 <assert_contents> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
290 <has_size value="6348800" delta="5000"/> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
291 </assert_contents> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
292 </output> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
293 |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
294 <output name="rinfo" ftype="txt"> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
295 <assert_contents> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
296 <has_text text="datm.r.2000-02-01-00000.nc" /> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
297 <has_text text="datm.rs1.2000-02-01-00000.bin" /> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
298 <has_text text="cpl.r.2000-02-01-00000.nc" /> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
299 <has_text text="clm2.r.2000-02-01-00000.nc" /> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
300 </assert_contents> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
301 </output> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
302 <output_collection name="history_files" count="1"> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
303 </output_collection> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
304 </test> |
efaa93ed5a79
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
climate
parents:
1
diff
changeset
|
305 |
0
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
306 </tests> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
307 <help><![CDATA[ |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
308 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
309 **The Functionally Assembled Terrestrial Ecosystem Simulator (FATES)** |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
310 ========================================================================== |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
311 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
312 This tool create and run CTSM-FATES EMERALD experiments from fates-emerald release. |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
313 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
314 This version of FATES is maintained by the University of Oslo. |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
315 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
316 Currently available resolution are as following: |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
317 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
318 SeedClim Sites: |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
319 ~~~~~~~~~~~~~~~ |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
320 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
321 - ALP1,61.0243N,8.12343E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
322 - ALP2,60.8231N,7.27596E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
323 - ALP3,60.8328N,7.17561E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
324 - ALP4,60.9335N,6.41504E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
325 - SUB1,60.8203N,8.70466E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
326 - SUB2,60.8760N,7.17666E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
327 - SUB3,61.0866N,6.63028E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
328 - SUB4,60.5445N,6.51468E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
329 - BOR1,61.0355N,9.07876E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
330 - BOR2,60.8803N,7.16982E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
331 - BOR3,60.6652N,6.33738E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
332 - BOR4,60.6901N,5.96487E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
333 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
334 LandPress Sites: |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
335 ~~~~~~~~~~~~~~~~ |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
336 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
337 - LYG,60.70084N,5.092566E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
338 - BUO,65.83677N,12.224506E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
339 - HAV,64.779N,11.2193E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
340 - SKO,65.79602N,12.219299E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
341 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
342 Three-D Sites: |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
343 ~~~~~~~~~~~~~~ |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
344 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
345 - VIKE,60.88019N,7.16990E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
346 - JOAS,60.86183N,7.16800E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
347 - LIAH,60.85994N,7.19504E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
348 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
349 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
350 Finnmark Site: |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
351 ~~~~~~~~~~~~~~ |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
352 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
353 - FINN,69.341088N,25.293524E |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
354 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
355 ]]></help> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
356 <citations> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
357 |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
358 </citations> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
359 <edam_topics> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
360 <edam_topic>topic_3855</edam_topic> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
361 <edam_topic>topic_3318</edam_topic> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
362 <edam_topic>topic_3050</edam_topic> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
363 <edam_topic>topic_0610</edam_topic> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
364 </edam_topics> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
365 <edam_operations> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
366 <edam_operation>operation_3946</edam_operation> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
367 <edam_operation>operation_2426</edam_operation> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
368 </edam_operations> |
8c7414c07367
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit f282701cadbb0c90c2c77a52579f18b44a357e24"
climate
parents:
diff
changeset
|
369 </tool> |