Mercurial > repos > climate > ctsm_fates
changeset 3:efaa93ed5a79 draft default tip
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/fates-emerald commit fcaf120dd9c0ce3f453faa3e4d469aff8d35e17e"
| author | climate |
|---|---|
| date | Thu, 17 Dec 2020 14:33:35 +0000 |
| parents | b525b88bc941 |
| children | |
| files | ctsm-fates.xml test-data/atm.log test-data/cesm.log test-data/cpl.log test-data/lnd.log test-data/restart_info.txt test-data/rof.log |
| diffstat | 7 files changed, 57 insertions(+), 2610 deletions(-) [+] |
line wrap: on
line diff
--- a/ctsm-fates.xml Wed Oct 21 20:49:19 2020 +0000 +++ b/ctsm-fates.xml Thu Dec 17 14:33:35 2020 +0000 @@ -1,4 +1,4 @@ -<tool id="ctsm_fates" name="CTSM/FATES-EMERALD" version="2.0.1"> +<tool id="ctsm_fates" name="CTSM/FATES-EMERALD" version="2.0.1.1"> <description>Functionally Assembled Terrestrial Ecosystem Simulator</description> <requirements> <requirement type="package" version="2.0.1">fates-emerald</requirement> @@ -196,7 +196,7 @@ </inputs> <outputs> <collection name="history_files" type="list" label="${tool.name} on ${inputdata.name} (history file)"> - <discover_datasets pattern="__designation_and_ext__" directory="output_dir" visible="true" format="netcdf"/> + <discover_datasets pattern="__name__" directory="output_dir" visible="true" format="netcdf"/> </collection> <data name="atm_log" format="txt" label="${tool.name} on ${inputdata.name} (atm.log)"/> <data name="cesm_log" format="txt" label="${tool.name} on ${inputdata.name} (cesm.log)"/> @@ -217,38 +217,33 @@ <param name="run_startdate" value="2000-01-01" /> <param name="stop_option" value="nsteps" /> <param name="stopn" value="1" /> - <output name="atm_log" ftype="txt" file="atm.log" compare="sim_size" delta="1000"> + <output name="atm_log" ftype="txt"> <assert_contents> <has_text text="(datm_comp_final) atm: end of main integration loop" /> </assert_contents> </output> - <output name="cesm_log" ftype="txt" file="cesm.log" compare="sim_size" delta="1000"> + <output name="cesm_log" ftype="txt"> <assert_contents> <has_text text="pes participating in computation for CLM" /> </assert_contents> </output> - <output name="cpl_log" ftype="txt" file="cpl.log" compare="sim_size" delta="1000"> + <output name="cpl_log" ftype="txt"> <assert_contents> <has_text text="SUCCESSFUL TERMINATION" /> </assert_contents> </output> - <output name="lnd_log" ftype="txt" file="lnd.log" compare="sim_size" delta="1000"> + <output name="lnd_log" ftype="txt"> <assert_contents> <has_text text="Successfully" /> </assert_contents> </output> - <output name="rof_log" ftype="txt" file="rof.log" compare="sim_size" delta="1000"> + <output name="rof_log" ftype="txt"> <assert_contents> <has_text text="MOSART model initialization" /> </assert_contents> </output> - <output name="work" ftype="tar" file="workdir.tar" compare="sim_size" delta="1000"> - <assert_contents> - <has_size value="0"/> - </assert_contents> - </output> <output name="restart" ftype="tar" file="restart.tar" compare="sim_size" delta="100" /> - <output name="rinfo" ftype="txt" file="restart_info.txt" compare="sim_size" delta="1000"> + <output name="rinfo" ftype="txt"> <assert_contents> <has_text text="datm.r.2000-01-01-01800.nc" /> <has_text text="datm.rs1.2000-01-01-01800.bin" /> @@ -259,6 +254,55 @@ <output_collection name="history_files" count="0"> </output_collection> </test> + <test> + <param name="inputdata" value="inputdata_test.tar" /> + <param name="casename" value="one_month" /> + <param name="resolution" value="1x1_ALP1" /> + <param name="stop_option" value="nmonths" /> + <param name="stopn" value="1" /> + <output name="atm_log" ftype="txt"> + <assert_contents> + <has_text text="(datm_comp_final) atm: end of main integration loop" /> + </assert_contents> + </output> + <output name="cesm_log" ftype="txt"> + <assert_contents> + <has_text text="pes participating in computation for CLM" /> + </assert_contents> + </output> + <output name="cpl_log" ftype="txt"> + <assert_contents> + <has_text text="SUCCESSFUL TERMINATION" /> + </assert_contents> + </output> + <output name="lnd_log" ftype="txt"> + <assert_contents> + <has_text text="Successfully" /> + </assert_contents> + </output> + <output name="rof_log" ftype="txt"> + <assert_contents> + <has_text text="MOSART model initialization" /> + </assert_contents> + </output> + <output name="restart" ftype="tar"> + <assert_contents> + <has_size value="6348800" delta="5000"/> + </assert_contents> + </output> + + <output name="rinfo" ftype="txt"> + <assert_contents> + <has_text text="datm.r.2000-02-01-00000.nc" /> + <has_text text="datm.rs1.2000-02-01-00000.bin" /> + <has_text text="cpl.r.2000-02-01-00000.nc" /> + <has_text text="clm2.r.2000-02-01-00000.nc" /> + </assert_contents> + </output> + <output_collection name="history_files" count="1"> + </output_collection> + </test> + </tests> <help><![CDATA[
--- a/test-data/atm.log Wed Oct 21 20:49:19 2020 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,240 +0,0 @@ -(datm_comp_init) decomp = 1d -(datm_comp_init) iradsw = 1 -(datm_comp_init) factorFn = null -(datm_comp_init) restfilm = undefined -(datm_comp_init) restfils = undefined -(datm_comp_init) presaero = T -(datm_comp_init) force_prognostic_true = F -(datm_comp_init) wiso_datm = F -(datm_comp_init) inst_index = 1 -(datm_comp_init) inst_name = ATM -(datm_comp_init) inst_suffix = -(shr_strdata_readnml) reading input namelist file: datm_in -(shr_stream_init) Reading file datm.streams.txt.CLM1PT.1x1_ALP1.Solar -(shr_file_freeUnit) unit 97 was not in use -(shr_stream_init) Reading file datm.streams.txt.CLM1PT.1x1_ALP1.Precip -(shr_file_freeUnit) unit 97 was not in use -(shr_stream_init) Reading file datm.streams.txt.CLM1PT.1x1_ALP1.TPQW -(shr_file_freeUnit) unit 97 was not in use -(shr_stream_init) Reading file datm.streams.txt.presaero.clim_2000 -(shr_file_freeUnit) unit 97 was not in use -(shr_stream_init) Reading file datm.streams.txt.topo.observed -(shr_file_freeUnit) unit 97 was not in use -(datm_comp_init) datm datamode = CLMNCEP - (shr_strdata_init_streams) stream 1 - (shr_strdata_init_streams) filePath = 1 /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/share/domains/ALP1/ - (shr_strdata_init_streams) fileName = 1 /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/share/domains/ALP1/domain.lnd.ALP1.200422.nc - (shr_strdata_init_streams) timeName = 1 time - (shr_strdata_init_streams) lonName = 1 xc - (shr_strdata_init_streams) latName = 1 yc - (shr_strdata_init_streams) hgtName = 1 unknownname - (shr_strdata_init_streams) maskName = 1 mask - (shr_strdata_init_streams) areaName = 1 area - (shr_strdata_init_streams) stream 2 - (shr_strdata_init_streams) filePath = 2 /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/share/domains/ALP1/ - (shr_strdata_init_streams) fileName = 2 /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/share/domains/ALP1/domain.lnd.ALP1.200422.nc - (shr_strdata_init_streams) timeName = 2 time - (shr_strdata_init_streams) lonName = 2 xc - (shr_strdata_init_streams) latName = 2 yc - (shr_strdata_init_streams) hgtName = 2 unknownname - (shr_strdata_init_streams) maskName = 2 mask - (shr_strdata_init_streams) areaName = 2 area - (shr_strdata_init_streams) stream 3 - (shr_strdata_init_streams) filePath = 3 /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/share/domains/ALP1/ - (shr_strdata_init_streams) fileName = 3 /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/share/domains/ALP1/domain.lnd.ALP1.200422.nc - (shr_strdata_init_streams) timeName = 3 time - (shr_strdata_init_streams) lonName = 3 xc - (shr_strdata_init_streams) latName = 3 yc - (shr_strdata_init_streams) hgtName = 3 unknownname - (shr_strdata_init_streams) maskName = 3 mask - (shr_strdata_init_streams) areaName = 3 area - (shr_strdata_init_streams) stream 4 - (shr_strdata_init_streams) filePath = 4 /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/cam/chem/trop_mozart_aero/aero/ - (shr_strdata_init_streams) fileName = 4 /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/cam/chem/trop_mozart_aero/aero/ALP1/aerosoldep_WACCM.ensmean_monthly_hist_1849-2015_0.9x1.25_CMIP6_c180926_ALP1.nc - (shr_strdata_init_streams) timeName = 4 time - (shr_strdata_init_streams) lonName = 4 lon - (shr_strdata_init_streams) latName = 4 lat - (shr_strdata_init_streams) hgtName = 4 unknownname - (shr_strdata_init_streams) maskName = 4 mask - (shr_strdata_init_streams) areaName = 4 area - (shr_strdata_init_streams) stream 5 - (shr_strdata_init_streams) filePath = 5 /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/topo_forcing/ - (shr_strdata_init_streams) fileName = 5 /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/topo_forcing/ALP1/topodata_ALP1.nc - (shr_strdata_init_streams) timeName = 5 time - (shr_strdata_init_streams) lonName = 5 LONGXY - (shr_strdata_init_streams) latName = 5 LATIXY - (shr_strdata_init_streams) hgtName = 5 unknownname - (shr_strdata_init_streams) maskName = 5 mask - (shr_strdata_init_streams) areaName = 5 area -(shr_strdata_print) ---------------------------------------------------------- -(shr_strdata_print) name = ATM data -(shr_strdata_print) dataMode = CLMNCEP -(shr_strdata_print) domainFile = /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/share/domains/ALP1/domain.lnd.ALP1.200422.nc -(shr_strdata_print) nxg = 1 -(shr_strdata_print) nyg = 1 -(shr_strdata_print) nzg = -1 -(shr_strdata_print) calendar = NO_LEAP -(shr_strdata_print) io_type = 6 -(shr_strdata_print) eccen = 1.000000E+36 -(shr_strdata_print) mvelpp = 1.000000E+36 -(shr_strdata_print) lambm0 = 1.000000E+36 -(shr_strdata_print) obliqr = 1.000000E+36 -(shr_strdata_print) nstreams = 5 -(shr_strdata_print) pio_iotype = 6 -(shr_strdata_print) streams ( 1) = datm.streams.txt.CLM1PT.1x1_ALP1.Solar 1901 1901 1950 -(shr_strdata_print) taxMode ( 1) = cycle -(shr_strdata_print) dtlimit ( 1) = 1.500000E+00 -(shr_strdata_print) strnxg ( 1) = 1 -(shr_strdata_print) strnyg ( 1) = 1 -(shr_strdata_print) strnzg ( 1) = -1 -(shr_strdata_print) dofill ( 1) = F -(shr_strdata_print) fillalgo( 1) = nn -(shr_strdata_print) fillmask( 1) = nomask -(shr_strdata_print) fillread( 1) = NOT_SET -(shr_strdata_print) fillwrit( 1) = NOT_SET -(shr_strdata_print) domaps ( 1) = F -(shr_strdata_print) mapalgo ( 1) = nn -(shr_strdata_print) mapmask ( 1) = nomask -(shr_strdata_print) mapread ( 1) = NOT_SET -(shr_strdata_print) mapwrit ( 1) = NOT_SET -(shr_strdata_print) tintalgo( 1) = coszen -(shr_strdata_print) readmode( 1) = single -(shr_strdata_print) -(shr_strdata_print) streams ( 2) = datm.streams.txt.CLM1PT.1x1_ALP1.Precip 1901 1901 1950 -(shr_strdata_print) taxMode ( 2) = cycle -(shr_strdata_print) dtlimit ( 2) = 1.500000E+00 -(shr_strdata_print) strnxg ( 2) = 1 -(shr_strdata_print) strnyg ( 2) = 1 -(shr_strdata_print) strnzg ( 2) = -1 -(shr_strdata_print) dofill ( 2) = F -(shr_strdata_print) fillalgo( 2) = nn -(shr_strdata_print) fillmask( 2) = nomask -(shr_strdata_print) fillread( 2) = NOT_SET -(shr_strdata_print) fillwrit( 2) = NOT_SET -(shr_strdata_print) domaps ( 2) = F -(shr_strdata_print) mapalgo ( 2) = nn -(shr_strdata_print) mapmask ( 2) = nomask -(shr_strdata_print) mapread ( 2) = NOT_SET -(shr_strdata_print) mapwrit ( 2) = NOT_SET -(shr_strdata_print) tintalgo( 2) = nearest -(shr_strdata_print) readmode( 2) = single -(shr_strdata_print) -(shr_strdata_print) streams ( 3) = datm.streams.txt.CLM1PT.1x1_ALP1.TPQW 1901 1901 1950 -(shr_strdata_print) taxMode ( 3) = cycle -(shr_strdata_print) dtlimit ( 3) = 1.500000E+00 -(shr_strdata_print) strnxg ( 3) = 1 -(shr_strdata_print) strnyg ( 3) = 1 -(shr_strdata_print) strnzg ( 3) = -1 -(shr_strdata_print) dofill ( 3) = F -(shr_strdata_print) fillalgo( 3) = nn -(shr_strdata_print) fillmask( 3) = nomask -(shr_strdata_print) fillread( 3) = NOT_SET -(shr_strdata_print) fillwrit( 3) = NOT_SET -(shr_strdata_print) domaps ( 3) = F -(shr_strdata_print) mapalgo ( 3) = nn -(shr_strdata_print) mapmask ( 3) = nomask -(shr_strdata_print) mapread ( 3) = NOT_SET -(shr_strdata_print) mapwrit ( 3) = NOT_SET -(shr_strdata_print) tintalgo( 3) = linear -(shr_strdata_print) readmode( 3) = single -(shr_strdata_print) -(shr_strdata_print) streams ( 4) = datm.streams.txt.presaero.clim_2000 1 2000 2000 -(shr_strdata_print) taxMode ( 4) = cycle -(shr_strdata_print) dtlimit ( 4) = 1.500000E+00 -(shr_strdata_print) strnxg ( 4) = 1 -(shr_strdata_print) strnyg ( 4) = 1 -(shr_strdata_print) strnzg ( 4) = -1 -(shr_strdata_print) dofill ( 4) = F -(shr_strdata_print) fillalgo( 4) = nn -(shr_strdata_print) fillmask( 4) = nomask -(shr_strdata_print) fillread( 4) = NOT_SET -(shr_strdata_print) fillwrit( 4) = NOT_SET -(shr_strdata_print) domaps ( 4) = F -(shr_strdata_print) mapalgo ( 4) = nn -(shr_strdata_print) mapmask ( 4) = nomask -(shr_strdata_print) mapread ( 4) = NOT_SET -(shr_strdata_print) mapwrit ( 4) = NOT_SET -(shr_strdata_print) tintalgo( 4) = linear -(shr_strdata_print) readmode( 4) = single -(shr_strdata_print) -(shr_strdata_print) streams ( 5) = datm.streams.txt.topo.observed 1 1 1 -(shr_strdata_print) taxMode ( 5) = cycle -(shr_strdata_print) dtlimit ( 5) = 1.500000E+00 -(shr_strdata_print) strnxg ( 5) = 1 -(shr_strdata_print) strnyg ( 5) = 1 -(shr_strdata_print) strnzg ( 5) = -1 -(shr_strdata_print) dofill ( 5) = F -(shr_strdata_print) fillalgo( 5) = nn -(shr_strdata_print) fillmask( 5) = nomask -(shr_strdata_print) fillread( 5) = NOT_SET -(shr_strdata_print) fillwrit( 5) = NOT_SET -(shr_strdata_print) domaps ( 5) = F -(shr_strdata_print) mapalgo ( 5) = nn -(shr_strdata_print) mapmask ( 5) = nomask -(shr_strdata_print) mapread ( 5) = NOT_SET -(shr_strdata_print) mapwrit ( 5) = NOT_SET -(shr_strdata_print) tintalgo( 5) = lower -(shr_strdata_print) readmode( 5) = single -(shr_strdata_print) -(shr_strdata_print) nvectors = 0 -(shr_strdata_print) ---------------------------------------------------------- -(datm_comp_init) initialize gsmaps -(datm_comp_init) copy domains -(datm_comp_init) allocate AVs -(datm_comp_init) flds_strm = strm_swdn:strm_precn:strm_tbot:strm_wind:strm_pbot:strm_shum:strm_lwdn -(shr_dmodel_readstrm) open : /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/ALP1/clm1pt_ALP1_1950-01.nc -(shr_dmodel_readstrm) file lb: /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/ALP1/clm1pt_ALP1_1950-01.nc 1 -(shr_dmodel_readstrm) file ub: /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/ALP1/clm1pt_ALP1_1950-01.nc 2 -(shr_dmodel_readstrm) open : /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/ALP1/clm1pt_ALP1_1949-12.nc -(shr_dmodel_readstrm) file lb: /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/ALP1/clm1pt_ALP1_1949-12.nc 248 -(shr_dmodel_readstrm) close : /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/ALP1/clm1pt_ALP1_1949-12.nc -(shr_dmodel_readstrm) open : /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/ALP1/clm1pt_ALP1_1950-01.nc -(shr_dmodel_readstrm) file ub: /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/ALP1/clm1pt_ALP1_1950-01.nc 1 -(shr_dmodel_readstrm) open : /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/ALP1/clm1pt_ALP1_1949-12.nc -(shr_dmodel_readstrm) file lb: /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/ALP1/clm1pt_ALP1_1949-12.nc 248 -(shr_dmodel_readstrm) close : /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/ALP1/clm1pt_ALP1_1949-12.nc -(shr_dmodel_readstrm) open : /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/ALP1/clm1pt_ALP1_1950-01.nc -(shr_dmodel_readstrm) file ub: /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/ALP1/clm1pt_ALP1_1950-01.nc 1 -(shr_dmodel_readstrm) open : /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/cam/chem/trop_mozart_aero/aero/ALP1/aerosoldep_WACCM.ensmean_monthly_hist_1849-2015_0.9x1.25_CMIP6_c180926_ALP1.nc -(shr_dmodel_readstrm) file lb: /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/cam/chem/trop_mozart_aero/aero/ALP1/aerosoldep_WACCM.ensmean_monthly_hist_1849-2015_0.9x1.25_CMIP6_c180926_ALP1.nc 1824 -(shr_dmodel_readstrm) file ub: /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/cam/chem/trop_mozart_aero/aero/ALP1/aerosoldep_WACCM.ensmean_monthly_hist_1849-2015_0.9x1.25_CMIP6_c180926_ALP1.nc 1813 -(shr_dmodel_readstrm) open : /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/topo_forcing/ALP1/topodata_ALP1.nc -(shr_dmodel_readstrm) file lb: /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/topo_forcing/ALP1/topodata_ALP1.nc 1 -(shr_dmodel_readstrm) file ub: /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/atm/datm7/topo_forcing/ALP1/topodata_ALP1.nc 1 - (datm_comp_run) max values = 266.23443603515625 0.0000000000000000 0.0000000000000000 -(datm_comp_run) atm: model date 20000101 0s -(datm_comp_init) datm_comp_init done -(datm_comp_run) writing test.datm.rs1.2000-01-01-01800.bin20000101 1800s -(shr_stream_restWrite) case name : test -(shr_stream_restWrite) case description : SDATM strdata -(shr_stream_restWrite) File created : 2020-10-20 14:24:33 -(shr_stream_restWrite) Number of streams 5 -(shr_stream_restWrite) * stream 1 first file name = clm1pt_ALP1_1901-01.nc -(shr_stream_restWrite) * stream 1 first have data = T -(shr_stream_restWrite) * stream 1 first nt = 248 -(shr_stream_restWrite) * stream 1 first date secs = 19010101 0 -(shr_stream_restWrite) * stream 1 last date secs = 19010131 75600 -(shr_stream_restWrite) * stream 2 first file name = clm1pt_ALP1_1901-01.nc -(shr_stream_restWrite) * stream 2 first have data = T -(shr_stream_restWrite) * stream 2 first nt = 248 -(shr_stream_restWrite) * stream 2 first date secs = 19010101 5400 -(shr_stream_restWrite) * stream 2 last date secs = 19010131 81000 -(shr_stream_restWrite) * stream 3 first file name = clm1pt_ALP1_1901-01.nc -(shr_stream_restWrite) * stream 3 first have data = T -(shr_stream_restWrite) * stream 3 first nt = 248 -(shr_stream_restWrite) * stream 3 first date secs = 19010101 5400 -(shr_stream_restWrite) * stream 3 last date secs = 19010131 81000 -(shr_stream_restWrite) * stream 4 first file name = ALP1/aerosoldep_WACCM.ensmean_monthly_hist_1849-2015_0.9x1.25_CMIP6_c180926_ALP1.nc -(shr_stream_restWrite) * stream 4 first have data = T -(shr_stream_restWrite) * stream 4 first nt = 2004 -(shr_stream_restWrite) * stream 4 first date secs = 18490116 43200 -(shr_stream_restWrite) * stream 4 last date secs = 20151216 43200 -(shr_stream_restWrite) * stream 5 first file name = ALP1/topodata_ALP1.nc -(shr_stream_restWrite) * stream 5 first have data = T -(shr_stream_restWrite) * stream 5 first nt = 1 -(shr_stream_restWrite) * stream 5 first date secs = 10101 0 -(shr_stream_restWrite) * stream 5 last date secs = 10101 0 -(datm_comp_run) atm: model date 20000101 1800s -(datm_comp_final) ------------------------------------------------------------------------- -(datm_comp_final) atm: end of main integration loop -(datm_comp_final) -------------------------------------------------------------------------
--- a/test-data/cesm.log Wed Oct 21 20:49:19 2020 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,233 +0,0 @@ -nohup: ignoring input - PIO rearranger options: - comm type =p2p - comm fcd =2denable - max pend req (comp2io) = 0 - enable_hs (comp2io) = T - enable_isend (comp2io) = F - max pend req (io2comp) = 0 - enable_hs (io2comp) = F - enable_isend (io2comp) = T -(seq_comm_setcomm) init ID ( 1 GLOBAL ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =) -(seq_comm_setcomm) init ID ( 2 CPL ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =) -(seq_comm_setcomm) init ID ( 5 ATM ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =) -(seq_comm_joincomm) init ID ( 6 CPLATM ) join IDs = 2 5 ( npes = 1) ( nthreads = 1) -(seq_comm_jcommarr) init ID ( 3 ALLATMID ) join multiple comp IDs ( npes = 1) ( nthreads = 1) -(seq_comm_joincomm) init ID ( 4 CPLALLATMID ) join IDs = 2 3 ( npes = 1) ( nthreads = 1) -(seq_comm_setcomm) init ID ( 9 LND ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =) -(seq_comm_joincomm) init ID ( 10 CPLLND ) join IDs = 2 9 ( npes = 1) ( nthreads = 1) -(seq_comm_jcommarr) init ID ( 7 ALLLNDID ) join multiple comp IDs ( npes = 1) ( nthreads = 1) -(seq_comm_joincomm) init ID ( 8 CPLALLLNDID ) join IDs = 2 7 ( npes = 1) ( nthreads = 1) -(seq_comm_setcomm) init ID ( 13 ICE ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =) -(seq_comm_joincomm) init ID ( 14 CPLICE ) join IDs = 2 13 ( npes = 1) ( nthreads = 1) -(seq_comm_jcommarr) init ID ( 11 ALLICEID ) join multiple comp IDs ( npes = 1) ( nthreads = 1) -(seq_comm_joincomm) init ID ( 12 CPLALLICEID ) join IDs = 2 11 ( npes = 1) ( nthreads = 1) -(seq_comm_setcomm) init ID ( 17 OCN ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =) -(seq_comm_joincomm) init ID ( 18 CPLOCN ) join IDs = 2 17 ( npes = 1) ( nthreads = 1) -(seq_comm_jcommarr) init ID ( 15 ALLOCNID ) join multiple comp IDs ( npes = 1) ( nthreads = 1) -(seq_comm_joincomm) init ID ( 16 CPLALLOCNID ) join IDs = 2 15 ( npes = 1) ( nthreads = 1) -(seq_comm_setcomm) init ID ( 21 ROF ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =) -(seq_comm_joincomm) init ID ( 22 CPLROF ) join IDs = 2 21 ( npes = 1) ( nthreads = 1) -(seq_comm_jcommarr) init ID ( 19 ALLROFID ) join multiple comp IDs ( npes = 1) ( nthreads = 1) -(seq_comm_joincomm) init ID ( 20 CPLALLROFID ) join IDs = 2 19 ( npes = 1) ( nthreads = 1) -(seq_comm_setcomm) init ID ( 25 GLC ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =) -(seq_comm_joincomm) init ID ( 26 CPLGLC ) join IDs = 2 25 ( npes = 1) ( nthreads = 1) -(seq_comm_jcommarr) init ID ( 23 ALLGLCID ) join multiple comp IDs ( npes = 1) ( nthreads = 1) -(seq_comm_joincomm) init ID ( 24 CPLALLGLCID ) join IDs = 2 23 ( npes = 1) ( nthreads = 1) -(seq_comm_setcomm) init ID ( 29 WAV ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =) -(seq_comm_joincomm) init ID ( 30 CPLWAV ) join IDs = 2 29 ( npes = 1) ( nthreads = 1) -(seq_comm_jcommarr) init ID ( 27 ALLWAVID ) join multiple comp IDs ( npes = 1) ( nthreads = 1) -(seq_comm_joincomm) init ID ( 28 CPLALLWAVID ) join IDs = 2 27 ( npes = 1) ( nthreads = 1) -(seq_comm_setcomm) init ID ( 33 ESP ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =) -(seq_comm_joincomm) init ID ( 34 CPLESP ) join IDs = 2 33 ( npes = 1) ( nthreads = 1) -(seq_comm_jcommarr) init ID ( 31 ALLESPID ) join multiple comp IDs ( npes = 1) ( nthreads = 1) -(seq_comm_joincomm) init ID ( 32 CPLALLESPID ) join IDs = 2 31 ( npes = 1) ( nthreads = 1) -(seq_comm_setcomm) init ID ( 37 IAC ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =) -(seq_comm_joincomm) init ID ( 38 CPLIAC ) join IDs = 2 37 ( npes = 1) ( nthreads = 1) -(seq_comm_jcommarr) init ID ( 35 ALLIACID ) join multiple comp IDs ( npes = 1) ( nthreads = 1) -(seq_comm_joincomm) init ID ( 36 CPLALLIACID ) join IDs = 2 35 ( npes = 1) ( nthreads = 1) -(seq_comm_printcomms) 1 0 1 1 GLOBAL: -(seq_comm_printcomms) 2 0 1 1 CPL: -(seq_comm_printcomms) 3 0 1 1 ALLATMID: -(seq_comm_printcomms) 4 0 1 1 CPLALLATMID: -(seq_comm_printcomms) 5 0 1 1 ATM: -(seq_comm_printcomms) 6 0 1 1 CPLATM: -(seq_comm_printcomms) 7 0 1 1 ALLLNDID: -(seq_comm_printcomms) 8 0 1 1 CPLALLLNDID: -(seq_comm_printcomms) 9 0 1 1 LND: -(seq_comm_printcomms) 10 0 1 1 CPLLND: -(seq_comm_printcomms) 11 0 1 1 ALLICEID: -(seq_comm_printcomms) 12 0 1 1 CPLALLICEID: -(seq_comm_printcomms) 13 0 1 1 ICE: -(seq_comm_printcomms) 14 0 1 1 CPLICE: -(seq_comm_printcomms) 15 0 1 1 ALLOCNID: -(seq_comm_printcomms) 16 0 1 1 CPLALLOCNID: -(seq_comm_printcomms) 17 0 1 1 OCN: -(seq_comm_printcomms) 18 0 1 1 CPLOCN: -(seq_comm_printcomms) 19 0 1 1 ALLROFID: -(seq_comm_printcomms) 20 0 1 1 CPLALLROFID: -(seq_comm_printcomms) 21 0 1 1 ROF: -(seq_comm_printcomms) 22 0 1 1 CPLROF: -(seq_comm_printcomms) 23 0 1 1 ALLGLCID: -(seq_comm_printcomms) 24 0 1 1 CPLALLGLCID: -(seq_comm_printcomms) 25 0 1 1 GLC: -(seq_comm_printcomms) 26 0 1 1 CPLGLC: -(seq_comm_printcomms) 27 0 1 1 ALLWAVID: -(seq_comm_printcomms) 28 0 1 1 CPLALLWAVID: -(seq_comm_printcomms) 29 0 1 1 WAV: -(seq_comm_printcomms) 30 0 1 1 CPLWAV: -(seq_comm_printcomms) 31 0 1 1 ALLESPID: -(seq_comm_printcomms) 32 0 1 1 CPLALLESPID: -(seq_comm_printcomms) 33 0 1 1 ESP: -(seq_comm_printcomms) 34 0 1 1 CPLESP: -(seq_comm_printcomms) 35 0 1 1 ALLIACID: -(seq_comm_printcomms) 36 0 1 1 CPLALLIACID: -(seq_comm_printcomms) 37 0 1 1 IAC: -(seq_comm_printcomms) 38 0 1 1 CPLIAC: - (t_initf) Read in prof_inparm namelist from: drv_in - (t_initf) Using profile_disable= F - (t_initf) profile_timer= 4 - (t_initf) profile_depth_limit= 4 - (t_initf) profile_detail_limit= 2 - (t_initf) profile_barrier= F - (t_initf) profile_outpe_num= 1 - (t_initf) profile_outpe_stride= 0 - (t_initf) profile_single_file= F - (t_initf) profile_global_stats= T - (t_initf) profile_ovhd_measurement= F - (t_initf) profile_add_detail= F - (t_initf) profile_papi_enable= F - - - 1 pes participating in computation for CLM - ------------------------------------ - -NODE# NAME -( 0) galaxy-tools.novalocal - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Variable not found - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - clmfates_interfaceMod.F90::FatesReadPFTs :: CLM reading ED/FATES PFTs - clmfates_interfaceMod.F90:: reading fates_mort_freezetol - clmfates_interfaceMod.F90:: reading fates_recruit_hgt_min - clmfates_interfaceMod.F90:: reading fates_fire_crown_depth_frac - clmfates_interfaceMod.F90:: reading fates_fire_bark_scaler - clmfates_interfaceMod.F90:: reading fates_fire_crown_kill - clmfates_interfaceMod.F90:: reading fates_recruit_initd - clmfates_interfaceMod.F90:: reading fates_seed_suppl - clmfates_interfaceMod.F90:: reading fates_leaf_stomatal_slope_ballberry - clmfates_interfaceMod.F90:: reading fates_leaf_stomatal_slope_medlyn - clmfates_interfaceMod.F90:: reading fates_leaf_stomatal_intercept - clmfates_interfaceMod.F90:: reading fates_lf_flab - clmfates_interfaceMod.F90:: reading fates_lf_fcel - clmfates_interfaceMod.F90:: reading fates_lf_flig - clmfates_interfaceMod.F90:: reading fates_fr_flab - clmfates_interfaceMod.F90:: reading fates_fr_fcel - clmfates_interfaceMod.F90:: reading fates_fr_flig - clmfates_interfaceMod.F90:: reading fates_leaf_xl - clmfates_interfaceMod.F90:: reading fates_leaf_clumping_index - clmfates_interfaceMod.F90:: reading fates_leaf_c3psn - clmfates_interfaceMod.F90:: reading fates_smpso - clmfates_interfaceMod.F90:: reading fates_smpsc - clmfates_interfaceMod.F90:: reading fates_maintresp_reduction_curvature - clmfates_interfaceMod.F90:: reading fates_maintresp_reduction_intercept - clmfates_interfaceMod.F90:: reading fates_prescribed_npp_canopy - clmfates_interfaceMod.F90:: reading fates_prescribed_npp_understory - clmfates_interfaceMod.F90:: reading fates_prescribed_mortality_canopy - clmfates_interfaceMod.F90:: reading fates_prescribed_mortality_understory - clmfates_interfaceMod.F90:: reading fates_prescribed_recruitment - clmfates_interfaceMod.F90:: reading fates_fire_alpha_SH - clmfates_interfaceMod.F90:: reading fates_allom_frbstor_repro - clmfates_interfaceMod.F90:: reading fates_hydr_p_taper - clmfates_interfaceMod.F90:: reading fates_hydr_rs2 - clmfates_interfaceMod.F90:: reading fates_hydr_srl - clmfates_interfaceMod.F90:: reading fates_hydr_rfrac_stem - clmfates_interfaceMod.F90:: reading fates_hydr_avuln_gs - clmfates_interfaceMod.F90:: reading fates_hydr_p50_gs - clmfates_interfaceMod.F90:: reading fates_mort_bmort - clmfates_interfaceMod.F90:: reading fates_mort_r_size_senescence - clmfates_interfaceMod.F90:: reading fates_mort_ip_size_senescence - clmfates_interfaceMod.F90:: reading fates_mort_r_age_senescence - clmfates_interfaceMod.F90:: reading fates_mort_ip_age_senescence - clmfates_interfaceMod.F90:: reading fates_mort_scalar_coldstress - clmfates_interfaceMod.F90:: reading fates_mort_scalar_cstarvation - clmfates_interfaceMod.F90:: reading fates_mort_scalar_hydrfailure - clmfates_interfaceMod.F90:: reading fates_mort_hf_sm_threshold - clmfates_interfaceMod.F90:: reading fates_mort_hf_flc_threshold - clmfates_interfaceMod.F90:: reading fates_leaf_vcmaxha - clmfates_interfaceMod.F90:: reading fates_leaf_jmaxha - clmfates_interfaceMod.F90:: reading fates_leaf_tpuha - clmfates_interfaceMod.F90:: reading fates_leaf_vcmaxhd - clmfates_interfaceMod.F90:: reading fates_leaf_jmaxhd - clmfates_interfaceMod.F90:: reading fates_leaf_tpuhd - clmfates_interfaceMod.F90:: reading fates_leaf_vcmaxse - clmfates_interfaceMod.F90:: reading fates_leaf_jmaxse - clmfates_interfaceMod.F90:: reading fates_leaf_tpuse - clmfates_interfaceMod.F90:: reading fates_seed_germination_rate - clmfates_interfaceMod.F90:: reading fates_seed_decay_rate - clmfates_interfaceMod.F90:: reading fates_trim_limit - clmfates_interfaceMod.F90:: reading fates_trim_inc - clmfates_interfaceMod.F90:: reading fates_leaf_diameter - clmfates_interfaceMod.F90:: reading fates_z0mr - clmfates_interfaceMod.F90:: reading fates_displar - clmfates_interfaceMod.F90:: reading fates_phenflush_fraction - clmfates_interfaceMod.F90:: reading fates_phen_cold_size_threshold - clmfates_interfaceMod.F90:: reading fates_phen_stem_drop_fraction - clmfates_interfaceMod.F90:: reading fates_eca_decompmicc - clmfates_interfaceMod.F90:: reading fates_eca_km_nh4 - clmfates_interfaceMod.F90:: reading fates_eca_vmax_nh4 - clmfates_interfaceMod.F90:: reading fates_eca_km_no3 - clmfates_interfaceMod.F90:: reading fates_eca_vmax_no3 - clmfates_interfaceMod.F90:: reading fates_eca_km_p - clmfates_interfaceMod.F90:: reading fates_eca_vmax_p - clmfates_interfaceMod.F90:: reading fates_eca_km_ptase - clmfates_interfaceMod.F90:: reading fates_eca_vmax_ptase - clmfates_interfaceMod.F90:: reading fates_eca_alpha_ptase - clmfates_interfaceMod.F90:: reading fates_eca_lambda_ptase - clmfates_interfaceMod.F90:: reading fates_prescribed_nuptake - clmfates_interfaceMod.F90:: reading fates_prescribed_puptake - clmfates_interfaceMod.F90:: reading fates_rholvis - clmfates_interfaceMod.F90:: reading fates_rholnir - clmfates_interfaceMod.F90:: reading fates_rhosvis - clmfates_interfaceMod.F90:: reading fates_rhosnir - clmfates_interfaceMod.F90:: reading fates_taulvis - clmfates_interfaceMod.F90:: reading fates_taulnir - clmfates_interfaceMod.F90:: reading fates_tausvis - clmfates_interfaceMod.F90:: reading fates_tausnir - clmfates_interfaceMod.F90:: reading fates_hydr_avuln_node - clmfates_interfaceMod.F90:: reading fates_hydr_p50_node - clmfates_interfaceMod.F90:: reading fates_hydr_thetas_node - clmfates_interfaceMod.F90:: reading fates_hydr_epsil_node - clmfates_interfaceMod.F90:: reading fates_hydr_pitlp_node - clmfates_interfaceMod.F90:: reading fates_hydr_resid_node - clmfates_interfaceMod.F90:: reading fates_hydr_fcap_node - clmfates_interfaceMod.F90:: reading fates_hydr_pinot_node - clmfates_interfaceMod.F90:: reading fates_hydr_kmax_node - clmfates_interfaceMod.F90:: reading fates_leaf_vcmax25top - NetCDF: Variable not found - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Invalid dimension ID or name - NetCDF: Variable not found - NetCDF: Variable not found
--- a/test-data/lnd.log Wed Oct 21 20:49:19 2020 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,2106 +0,0 @@ -(lnd_init_mct) :CLM land model initialization - unknown - - Attempting to initialize the land model ..... - - Attempting to initialize run control settings ..... - Read in clm_inparm namelist from: lnd_in - - rooting_profile settings: - rooting_profile_method_water = 1 - (rooting_profile_varindex_water = 1 ) - rooting_profile_method_carbon = 1 - (rooting_profile_varindex_carbon = 2 ) - - soilwater_movement settings: - soilwater_movement_method = 1 - upper_boundary_condition = 1 - lower_boundary_condition = 2 - use_bedrock = F - dtmin = 60.000000000000000 - verySmall = 1.0000000000000000E-008 - xTolerUpper = 0.10000000000000001 - xTolerLower = 1.0000000000000000E-002 - expensive = 42 - inexpensive = 1 - flux_calculation = 1 - - soil_resis settings: - soil_resis_method = 1 - Read in canopyfluxes_inparm namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - canopyfluxes_inparm settings: -&CANOPYFLUXES_INPARM - USE_UNDERCANOPY_STABILITY=F, - ITMAX_CANOPY_FLUXES= 40, - / - - Read in clm_CanopyHydrology_inparm namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - canopyhydrology settings: - interception_fraction = 1.0000000000000000 - maximum_leaf_wetted_fraction = 5.0000000000000003E-002 - use_clm5_fpi = T - Read in surfacealbedo_inparm namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - surfacealbedo_inparm settings -&SURFACEALBEDO_INPARM - SNOWVEG_AFFECTS_RADIATION=T, - / - - Read in clm_SnowHydrology_inparm namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - SnowHydrology settings: -&CLM_SNOWHYDROLOGY_INPARM - WIND_DEPENDENT_SNOW_DENSITY=T, - SNOW_OVERBURDEN_COMPACTION_METHOD="Vionnet2012 ", - LOTMP_SNOWDENSITY_METHOD="Slater2017 ", - UPPLIM_DESTRUCT_METAMORPH= 175.00000000000000 , - OVERBURDEN_COMPRESS_TFACTOR= 8.0000000000000002E-002, - MIN_WIND_SNOWCOMPACT= 5.0000000000000000 , - RESET_SNOW=F, - RESET_SNOW_GLC=F, - RESET_SNOW_GLC_ELA= 1000000000.0000000 , - SNOW_DZMIN_1= 1.0000000000000000E-002, - SNOW_DZMAX_L_1= 2.9999999999999999E-002, - SNOW_DZMAX_U_1= 2.0000000000000000E-002, - SNOW_DZMIN_2= 1.4999999999999999E-002, - SNOW_DZMAX_L_2= 7.0000000000000007E-002, - SNOW_DZMAX_U_2= 5.0000000000000003E-002, - / - - Read in clmu_inparm namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - urban air conditioning/heating and wasteheat = ON_WASTEHEAT - urban traffic flux = F - Read in clm_humanindex_inparm namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - Read in luna namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - luna settings: -&LUNA - JMAXB1= 0.10000000000000001 , - / - - Read in soilhydrology_inparm namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - soilhydrology_inparm settings: -&SOILHYDROLOGY_INPARM - BASEFLOW_SCALAR= 1.0000000000000000E-003, - / - - Read in CENTURY_soilBGCDecompCascade namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - CENTURY_soilBGCDecompCascade settings: -&CENTURY_SOILBGCDECOMPCASCADE - INITIAL_CSTOCKS= 3*200.00000000000000 , - INITIAL_CSTOCKS_DEPTH= 1.5000000000000000 , - / - - Successfully initialized run control settings - - Attempting to read maxsoil_patches and numcft from the surface data ..... - (GETFIL): attempting to find local file surfdata_ALP1_simyr2000.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc 393216 - Successfully read maxsoil_patches and numcft from the surface data - - soil_layerstruct_predefined varpar 20SL_8.5m - soil_layerstruct_userdefined varpar -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 - nlevsoi, nlevgrnd varpar 20 25 - CLM varpar subsurface discretization levels - nlevsoi = 20 - nlevgrnd = 25 - nlevdecomp = 20 - nlevdecomp_full = 25 - nlevlak = 10 - - define run: - source = Community Terrestrial Systems Model - model_version = unknown - run type = initial - case title = UNSET - username = jovyan - hostname = espresso - process control parameters: - use_lch4 = F - use_nitrif_denitrif = F - use_vertsoilc = T - use_extralakelayers = F - use_vichydro = F - use_century_decomp = T - use_cn = F - use_cndv = F - use_crop = F - use_fertilizer = F - use_grainproduct = F - use_ozone = F - use_snicar_frc = F - use_vancouver = F - use_mexicocity = F - use_noio = F - use_SSRE = F - input data files: - PFT physiology and parameters file = /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/clm5_params.c200402.nc - surface data = /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc - land frac data = /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/share/domains/ALP1/domain.lnd.ALP1.200422.nc - Number of ACTIVE PFTS (0 means input pft data NOT collapsed to n_dom_pfts) = 0 - Number of ACTIVE LANDUNITS (0 means input landunit data NOT collapsed to n_dom_landunits) = 0 - Collapse urban landunits; done before collapsing all landunits to n_dom_landunits; .false. means do nothing i.e. keep all the urban landunits, though n_dom_landunits may still remove them = F - Threshold above which the model keeps the soil landunit = 0.0000000000000000 - Threshold above which the model keeps the crop landunit = 0.0000000000000000 - Threshold above which the model keeps the glacier landunit = 0.0000000000000000 - Threshold above which the model keeps the lake landunit = 0.0000000000000000 - Threshold above which the model keeps the wetland landunit = 0.0000000000000000 - Threshold above which the model keeps the urban landunits = 0.0000000000000000 - snow optical properties file = /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/snicardata/snicar_optics_5bnd_c090915.nc - snow aging parameters file = /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/snicardata/snicar_drdt_bst_fit_60_c070416.nc - Number of snow layers = 12 - Max snow depth (mm) = 10000.000000000000 - glc number of elevation classes = 10 - glc CLM glacier areas and topography will NOT evolve dynamically - glc snow persistence max days = 0 - initial data created by model (cold start) - atmospheric forcing data is from cesm atm model - Restart parameters: - restart pointer file directory = . - restart pointer file name = rpointer.lnd - model physics parameters: - CO2 volume mixing ratio (umol/mol) = 367.00000000000000 - land-ice albedos (unitless 0-1) = 0.50000000000000000 0.29999999999999999 - pre-defined soil layer structure = 20SL_8.5m - user-defined soil layer structure = -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 -9999999.0000000000 - user-defined number of soil layers = -9999999 - plant hydraulic stress = F - dynamic roots = F - nsegspc = 35 - perchroot (plant water stress based on unfrozen layers only) = F - perchroot (plant water stress based on time-integrated active layer only) = F - - Lake Model Namelists: - Increased mixing relative to Hostetler wind-driven eddy expression will be used for deep lakes exceeding depth 25.000000000000000 by a factor of 10.000000000000000 . - Albedo over melting lakes will approach values (visible, NIR): 0.10000000000000001 0.10000000000000001 as compared with 0.60, 0.40 for cold frozen lakes with no snow. - plant nitrogen model namelists: - use_flexibleCN = F - use_luna = F - ED/FATES: - use_fates = T - fates_spitfire_mode = 0 - use_fates_logging = F - fates_paramfile = /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/fates_params_api.14.0.0_12pft_c200921.nc - fates_parteh_mode = 1 - use_fates_planthydro = F - use_fates_cohort_age_tracking = F - use_fates_ed_st3 = F - use_fates_ed_prescribed_phys = F - use_fates_inventory_init = F - use_fates_fixed_biogeog = F - fates_inventory_ctrl_filename = - - dynamic_subgrid settings: -&DYNAMIC_SUBGRID - FLANDUSE_TIMESERIES=" ", - DO_TRANSIENT_PFTS=F, - DO_TRANSIENT_CROPS=F, - DO_HARVEST=F, - RESET_DYNBAL_BASELINES=F, - FOR_TESTING_ALLOW_NON_ANNUAL_CHANGES=F, - FOR_TESTING_ZERO_DYNBAL_FLUXES=F, - / - - Attempting to read global land mask from /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/share/domains/ALP1/domain.lnd.ALP1.200422.nc - (GETFIL): attempting to find local file domain.lnd.ALP1.200422.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/share/domains/ALP1/domain.lnd.ALP1.200422.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/share/domains/ALP1/domain.lnd.ALP1.200422.nc 458752 - lat/lon grid flag (isgrid2d) is F - ncd_inqvid: variable LANDMASK is not on dataset - decomp precompute numg,nclumps,seglen1,avg_seglen,nsegspc= 1 1 T 1.00000000 1.00000000 - Surface Grid Characteristics - longitude points = 1 - latitude points = 1 - total number of land gridcells = 1 - Decomposition Characteristics - clumps per process = 1 - gsMap Characteristics - lnd gsmap glo num of segs = 1 - - Attempting to read ldomain from /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/share/domains/ALP1/domain.lnd.ALP1.200422.nc - (GETFIL): attempting to find local file domain.lnd.ALP1.200422.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/share/domains/ALP1/domain.lnd.ALP1.200422.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/share/domains/ALP1/domain.lnd.ALP1.200422.nc 458752 - domain_check set = domain_set - domain_check decomped = F - domain_check ns = 1 - domain_check ni,nj = 1 1 - domain_check nbeg,nend = 1 1 - domain_check lonc = 8.1234299999999990 8.1234299999999990 - domain_check latc = 61.024299999999997 61.024299999999997 - domain_check mask = 1 1 - domain_check frac = 1.0000000000000000 1.0000000000000000 - domain_check area = 0.59903950391113359 0.59903950391113359 - domain_check pftm = -9999 -9999 - - Attempting to read GLACIER_REGION... - (GETFIL): attempting to find local file surfdata_ALP1_simyr2000.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc 458752 - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - clm_glacier_behavior settings: -&CLM_GLACIER_BEHAVIOR - GLACIER_REGION_BEHAVIOR="single_at_atm_topo ", 2*"virtual ","multiple ", 7*"UNSET ", - GLACIER_REGION_MELT_BEHAVIOR="remains_in_place ", 3*"replaced_by_ice ", 7*"UNSET ", - GLACIER_REGION_ICE_RUNOFF_BEHAVIOR= 2*"melted ", 2*"remains_ice ", 7*"UNSET ", - / - - Reading in urban input data from fsurdat file ... - (GETFIL): attempting to find local file surfdata_ALP1_simyr2000.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc 458752 - UrbanInput /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc - Sucessfully read urban input data - - Attempting to read PFT physiological data ..... - (GETFIL): attempting to find local file clm5_params.c200402.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/clm5_params.c200402.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/clm5_params.c200402.nc 458752 - (GETFIL): attempting to find local file fates_params_api.14.0.0_12pft_c200921.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/fates_params_api.14.0.0_12pft_c200921.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/fates_params_api.14.0.0_12pft_c200921.nc 458752 - (GETFIL): attempting to find local file clm5_params.c200402.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/clm5_params.c200402.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/clm5_params.c200402.nc 458752 - Successfully read PFT physiological data - - Attempting to read surface boundary data ..... - (GETFIL): attempting to find local file surfdata_ALP1_simyr2000.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc 458752 - check_var: variable xc is not on dataset - surfrd_get_data lon_var = LONGXY lat_var =LATIXY - WARNING: New CFT-based format surface datasets should be run with create_crop_landunit=T - WARNING: When fates is on we allow new CFT based surface datasets to be used with create_crop_land FALSE - Successfully read surface boundary data - - clmfates_interfaceMod.F90::FatesReadParameters :: CLM reading ED/FATES parameters - (GETFIL): attempting to find local file fates_params_api.14.0.0_12pft_c200921.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/fates_params_api.14.0.0_12pft_c200921.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/fates_params_api.14.0.0_12pft_c200921.nc 458752 - clmfates_interfaceMod.F90:: reading fates_mort_disturb_frac - clmfates_interfaceMod.F90:: reading fates_comp_excln - clmfates_interfaceMod.F90:: reading fates_init_litter - clmfates_interfaceMod.F90:: reading fates_fire_nignitions - clmfates_interfaceMod.F90:: reading fates_mort_understorey_death - clmfates_interfaceMod.F90:: reading fates_cwd_fcel - clmfates_interfaceMod.F90:: reading fates_cwd_flig - clmfates_interfaceMod.F90:: reading fates_base_mr_20 - clmfates_interfaceMod.F90:: reading fates_phen_drought_threshold - clmfates_interfaceMod.F90:: reading fates_phen_doff_time - clmfates_interfaceMod.F90:: reading fates_phen_a - clmfates_interfaceMod.F90:: reading fates_phen_b - clmfates_interfaceMod.F90:: reading fates_phen_c - clmfates_interfaceMod.F90:: reading fates_phen_chiltemp - clmfates_interfaceMod.F90:: reading fates_phen_mindayson - clmfates_interfaceMod.F90:: reading fates_phen_ncolddayslim - clmfates_interfaceMod.F90:: reading fates_phen_coldtemp - clmfates_interfaceMod.F90:: reading fates_cohort_size_fusion_tol - clmfates_interfaceMod.F90:: reading fates_cohort_age_fusion_tol - clmfates_interfaceMod.F90:: reading fates_patch_fusion_tol - clmfates_interfaceMod.F90:: reading fates_canopy_closure_thresh - clmfates_interfaceMod.F90:: reading fates_leaf_stomatal_model - clmfates_interfaceMod.F90:: reading fates_hydr_kmax_rsurf1 - clmfates_interfaceMod.F90:: reading fates_hydr_kmax_rsurf2 - clmfates_interfaceMod.F90:: reading fates_hydr_psi0 - clmfates_interfaceMod.F90:: reading fates_hydr_psicap - clmfates_interfaceMod.F90:: reading fates_soil_salinity - clmfates_interfaceMod.F90:: reading fates_logging_dbhmin - clmfates_interfaceMod.F90:: reading fates_logging_dbhmax - clmfates_interfaceMod.F90:: reading fates_logging_collateral_frac - clmfates_interfaceMod.F90:: reading fates_logging_coll_under_frac - clmfates_interfaceMod.F90:: reading fates_logging_direct_frac - clmfates_interfaceMod.F90:: reading fates_logging_mechanical_frac - clmfates_interfaceMod.F90:: reading fates_logging_event_code - clmfates_interfaceMod.F90:: reading fates_logging_dbhmax_infra - clmfates_interfaceMod.F90:: reading fates_logging_export_frac - clmfates_interfaceMod.F90:: reading fates_eca_plant_escalar - clmfates_interfaceMod.F90:: reading fates_q10_mr - clmfates_interfaceMod.F90:: reading fates_q10_froz - clmfates_interfaceMod.F90:: reading fates_history_sizeclass_bin_edges - clmfates_interfaceMod.F90:: reading fates_history_ageclass_bin_edges - clmfates_interfaceMod.F90:: reading fates_history_height_bin_edges - clmfates_interfaceMod.F90:: reading fates_fire_active_crown_fire - clmfates_interfaceMod.F90:: reading fates_fire_cg_strikes - clmfates_interfaceMod.F90:: reading fates_history_coageclass_bin_edges - clmfates_interfaceMod.F90:: reading fates_fire_fdi_a - clmfates_interfaceMod.F90:: reading fates_fire_fdi_b - clmfates_interfaceMod.F90:: reading fates_fire_fdi_alpha - clmfates_interfaceMod.F90:: reading fates_fire_miner_total - clmfates_interfaceMod.F90:: reading fates_fire_fuel_energy - clmfates_interfaceMod.F90:: reading fates_fire_part_dens - clmfates_interfaceMod.F90:: reading fates_fire_miner_damp - clmfates_interfaceMod.F90:: reading fates_fire_max_durat - clmfates_interfaceMod.F90:: reading fates_fire_durat_slope - clmfates_interfaceMod.F90:: reading fates_fire_drying_ratio - clmfates_interfaceMod.F90:: reading fates_fire_threshold - clmfates_interfaceMod.F90:: reading fates_CWD_frac - clmfates_interfaceMod.F90:: reading fates_fire_SAV - clmfates_interfaceMod.F90:: reading fates_fire_FBD - clmfates_interfaceMod.F90:: reading fates_fire_min_moisture - clmfates_interfaceMod.F90:: reading fates_fire_mid_moisture - clmfates_interfaceMod.F90:: reading fates_fire_low_moisture_Coeff - clmfates_interfaceMod.F90:: reading fates_fire_low_moisture_Slope - clmfates_interfaceMod.F90:: reading fates_fire_mid_moisture_Coeff - clmfates_interfaceMod.F90:: reading fates_fire_mid_moisture_Slope - clmfates_interfaceMod.F90:: reading fates_max_decomp - clmfates_interfaceMod.F90:: reading fates_phen_stress_decid - clmfates_interfaceMod.F90:: reading fates_phen_season_decid - clmfates_interfaceMod.F90:: reading fates_phen_evergreen - clmfates_interfaceMod.F90:: reading fates_fnrt_prof_a - clmfates_interfaceMod.F90:: reading fates_fnrt_prof_b - clmfates_interfaceMod.F90:: reading fates_fnrt_prof_mode - clmfates_interfaceMod.F90:: reading fates_woody - clmfates_interfaceMod.F90:: reading fates_wood_density - clmfates_interfaceMod.F90:: reading fates_leaf_slamax - clmfates_interfaceMod.F90:: reading fates_leaf_slatop - clmfates_interfaceMod.F90:: reading fates_allom_sai_scaler - clmfates_interfaceMod.F90:: reading fates_seed_dbh_repro_threshold - clmfates_interfaceMod.F90:: reading fates_alloc_storage_cushion - clmfates_interfaceMod.F90:: reading fates_leaf_stor_priority - clmfates_interfaceMod.F90:: reading fates_senleaf_long_fdrought - clmfates_interfaceMod.F90:: reading fates_root_long - clmfates_interfaceMod.F90:: reading fates_seed_alloc_mature - clmfates_interfaceMod.F90:: reading fates_seed_alloc - clmfates_interfaceMod.F90:: reading fates_c2b - clmfates_interfaceMod.F90:: reading fates_allom_l2fr - clmfates_interfaceMod.F90:: reading fates_grperc - clmfates_interfaceMod.F90:: reading fates_allom_dbh_maxheight - clmfates_interfaceMod.F90:: reading fates_allom_hmode - clmfates_interfaceMod.F90:: reading fates_allom_lmode - clmfates_interfaceMod.F90:: reading fates_allom_fmode - clmfates_interfaceMod.F90:: reading fates_allom_amode - clmfates_interfaceMod.F90:: reading fates_allom_stmode - clmfates_interfaceMod.F90:: reading fates_allom_cmode - clmfates_interfaceMod.F90:: reading fates_allom_smode - clmfates_interfaceMod.F90:: reading fates_allom_la_per_sa_int - clmfates_interfaceMod.F90:: reading fates_allom_la_per_sa_slp - clmfates_interfaceMod.F90:: reading fates_allom_agb_frac - clmfates_interfaceMod.F90:: reading fates_allom_d2h1 - clmfates_interfaceMod.F90:: reading fates_allom_d2h2 - clmfates_interfaceMod.F90:: reading fates_allom_d2h3 - clmfates_interfaceMod.F90:: reading fates_allom_d2bl1 - clmfates_interfaceMod.F90:: reading fates_allom_d2bl2 - clmfates_interfaceMod.F90:: reading fates_allom_d2bl3 - clmfates_interfaceMod.F90:: reading fates_allom_blca_expnt_diff - clmfates_interfaceMod.F90:: reading fates_allom_d2ca_coefficient_max - clmfates_interfaceMod.F90:: reading fates_allom_d2ca_coefficient_min - clmfates_interfaceMod.F90:: reading fates_allom_agb1 - clmfates_interfaceMod.F90:: reading fates_allom_agb2 - clmfates_interfaceMod.F90:: reading fates_allom_agb3 - clmfates_interfaceMod.F90:: reading fates_allom_agb4 - clmfates_interfaceMod.F90:: reading fates_turnover_retrans_mode - clmfates_interfaceMod.F90:: reading fates_branch_turnover - clmfates_interfaceMod.F90:: reading fates_prt_nitr_stoich_p1 - clmfates_interfaceMod.F90:: reading fates_prt_nitr_stoich_p2 - clmfates_interfaceMod.F90:: reading fates_prt_phos_stoich_p1 - clmfates_interfaceMod.F90:: reading fates_prt_phos_stoich_p2 - clmfates_interfaceMod.F90:: reading fates_prt_alloc_priority - clmfates_interfaceMod.F90:: reading fates_turnover_carb_retrans - clmfates_interfaceMod.F90:: reading fates_turnover_nitr_retrans - clmfates_interfaceMod.F90:: reading fates_turnover_phos_retrans - clmfates_interfaceMod.F90:: reading fates_leaf_long - (GETFIL): attempting to find local file clm5_params.c200402.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/clm5_params.c200402.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/clm5_params.c200402.nc 458752 - - ---clm_ptrs_check: - clm_ptrs_check: g index ranges - OK - clm_ptrs_check: l index ranges - OK - clm_ptrs_check: c index ranges - OK - clm_ptrs_check: p index ranges - OK - clm_ptrs_check: l mono increasing - OK - clm_ptrs_check: c mono increasing - OK - clm_ptrs_check: p mono increasing - OK - clm_ptrs_check: tree consistent - OK - - Surface Grid Characteristics - longitude points = 1 - latitude points = 1 - total number of gridcells = 1 - total number of landunits = 2 - total number of columns = 2 - total number of patches = 18 - total number of cohorts = 1680 - Decomposition Characteristics - clumps per process = 1 - gsMap Characteristics - lnd gsmap glo num of segs = 1 - gce gsmap glo num of segs = 1 - lun gsmap glo num of segs = 1 - col gsmap glo num of segs = 1 - patch gsmap glo num of segs = 1 - coh gsmap glo num of segs = 1 - - - proc= 0 beg gridcell= 1 end gridcell= 1 total gridcells per proc= 1 - proc= 0 beg landunit= 1 end landunit= 2 total landunits per proc= 2 - proc= 0 beg column = 1 end column = 2 total columns per proc = 2 - proc= 0 beg patch = 1 end patch = 18 total patches per proc = 18 - proc= 0 beg coh = 1 end coh = 1680 total coh per proc = 1680 - proc= 0 lnd ngseg = 1 lnd nlseg = 1 - proc= 0 gce ngseg = 1 gce nlseg = 1 - proc= 0 lun ngseg = 1 lun nlseg = 1 - proc= 0 col ngseg = 1 col nlseg = 1 - proc= 0 patch ngseg = 1 patch nlseg = 1 - proc= 0 coh ngseg = 1 coh nlseg = 1 - proc= 0 nclumps = 1 - proc= 0 clump no = 1 clump id= 1 beg gridcell= 1 end gridcell= 1 total gridcells per clump= 1 - proc= 0 clump no = 1 clump id= 1 beg landunit= 1 end landunit= 2 total landunits per clump = 2 - proc= 0 clump no = 1 clump id= 1 beg column = 1 end column = 2 total columns per clump = 2 - proc= 0 clump no = 1 clump id= 1 beg patch = 1 end patch = 18 total patches per clump = 18 - proc= 0 clump no = 1 clump id= 1 beg cohort = 1 end cohort = 1680 total cohorts per clump = 1680 - Read in clm_canopy_inparm namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - Read in photosyns_inparm namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - photosyns_inparm settings: -&PHOTOSYNS_INPARM - LEAFRESP_METHOD= 0, - LIGHT_INHIBIT=T, - ROOTSTEM_ACC=F, - STOMATALCOND_METHOD="Ball-Berry1987 ", - MODIFYPHOTO_AND_LMR_FORCROP=T, - / - - Read in crop namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - baset mapping for ALL crops are constant - - crop settings: -&CROP - BASET_MAPPING="constant ", - BASET_LATVARY_INTERCEPT= 12.000000000000000 , - BASET_LATVARY_SLOPE= 0.40000000000000002 , - / - - paramMod.F90::readParameters :: reading CLM parameters - (GETFIL): attempting to find local file clm5_params.c200402.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/clm5_params.c200402.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/clm5_params.c200402.nc 458752 - Attempting to read CN/BGC shared namelist parameters ..... - Read in bgc_shared namelist from: lnd_in - CN/BGC shared namelist parameters: - - decomp_depth_efolding = 10.000000000000000 - constrain_stress_deciduous_onset = T - - ******** CLM Time Manager Configuration ******** - Calendar type: NO_LEAP - Timestep size (seconds): 1800 - Start date (yr mon day tod): 2000 1 1 0 - Stop date (yr mon day tod): 2000 1 1 1800 - Reference date (yr mon day tod): 2000 1 1 0 - Current step number: 0 - Ending step number: -999999999 - Current date (yr mon day tod): 2000 1 1 0 - ************************************************ - Skip balance checking for the first 2 time steps - (GETFIL): attempting to find local file clm5_params.c200402.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/clm5_params.c200402.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/clm5_params.c200402.nc 458752 - - urbantv_streams settings: - stream_year_first_urbantv = 2000 - stream_year_last_urbantv = 2000 - model_year_align_urbantv = 1 - stream_fldFileName_urbantv = /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/urbandata/ALP1/CLM50_tbuildmax_Oleson_2016_0.9x1.25_simyr1849-2106_c160923_ALP1.nc - urbantv_tintalgo = linear - - (shr_strdata_init_streams) stream 1 - (shr_strdata_init_streams) filePath = 1 - (shr_strdata_init_streams) fileName = 1 /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/urbandata/ALP1/CLM50_tbuildmax_Oleson_2016_0.9x1.25_simyr1849-2106_c160923_ALP1.nc - (shr_strdata_init_streams) timeName = 1 time - (shr_strdata_init_streams) lonName = 1 lon - (shr_strdata_init_streams) latName = 1 lat - (shr_strdata_init_streams) hgtName = 1 undefined - (shr_strdata_init_streams) maskName = 1 LANDMASK - (shr_strdata_init_streams) areaName = 1 area -(shr_strdata_print) ---------------------------------------------------------- -(shr_strdata_print) name = urban time varying data -(shr_strdata_print) dataMode = NULL -(shr_strdata_print) domainFile = null -(shr_strdata_print) nxg = 1 -(shr_strdata_print) nyg = 1 -(shr_strdata_print) nzg = 1 -(shr_strdata_print) calendar = NO_LEAP -(shr_strdata_print) io_type = 6 -(shr_strdata_print) eccen = 1.000000E+36 -(shr_strdata_print) mvelpp = 1.000000E+36 -(shr_strdata_print) lambm0 = 1.000000E+36 -(shr_strdata_print) obliqr = 1.000000E+36 -(shr_strdata_print) nstreams = 1 -(shr_strdata_print) pio_iotype = 6 -(shr_strdata_print) streams ( 1) = null -(shr_strdata_print) taxMode ( 1) = extend -(shr_strdata_print) dtlimit ( 1) = 1.000000E+30 -(shr_strdata_print) strnxg ( 1) = 1 -(shr_strdata_print) strnyg ( 1) = 1 -(shr_strdata_print) strnzg ( 1) = -1 -(shr_strdata_print) dofill ( 1) = F -(shr_strdata_print) fillalgo( 1) = none -(shr_strdata_print) fillmask( 1) = nomask -(shr_strdata_print) fillread( 1) = NOT_SET -(shr_strdata_print) fillwrit( 1) = NOT_SET -(shr_strdata_print) domaps ( 1) = F -(shr_strdata_print) mapalgo ( 1) = nn -(shr_strdata_print) mapmask ( 1) = dstmask -(shr_strdata_print) mapread ( 1) = NOT_SET -(shr_strdata_print) mapwrit ( 1) = NOT_SET -(shr_strdata_print) tintalgo( 1) = linear -(shr_strdata_print) readmode( 1) = single -(shr_strdata_print) -(shr_strdata_print) nvectors = 0 -(shr_strdata_print) ---------------------------------------------------------- -(shr_dmodel_readstrm) open : /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/urbandata/ALP1/CLM50_tbuildmax_Oleson_2016_0.9x1.25_simyr1849-2106_c160923_ALP1.nc -(shr_dmodel_readstrm) file lb: /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/urbandata/ALP1/CLM50_tbuildmax_Oleson_2016_0.9x1.25_simyr1849-2106_c160923_ALP1.nc 152 -(shr_dmodel_readstrm) file ub: /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/urbandata/ALP1/CLM50_tbuildmax_Oleson_2016_0.9x1.25_simyr1849-2106_c160923_ALP1.nc 152 - (GETFIL): attempting to find local file surfdata_ALP1_simyr2000.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc 589824 - zsoi 1.0000000000000000E-002 4.0000000000000001E-002 8.9999999999999997E-002 0.16000000000000000 0.26000000000000001 0.40000000000000002 0.57999999999999996 0.79999999999999993 1.0600000000000001 1.3599999999999999 1.7000000000000002 2.0800000000000001 2.5000000000000000 2.9900000000000002 3.5800000000000001 4.2700000000000005 5.0600000000000005 5.9500000000000002 6.9399999999999995 8.0299999999999994 9.7949999999999999 13.327766952966369 19.483129170124386 28.870724434316031 41.998436864002869 - zisoi: 0.0000000000000000 2.0000000000000000E-002 5.9999999999999998E-002 0.12000000000000000 0.20000000000000001 0.32000000000000001 0.47999999999999998 0.67999999999999994 0.91999999999999993 1.2000000000000000 1.5200000000000000 1.8800000000000001 2.2800000000000002 2.7200000000000002 3.2600000000000002 3.9000000000000004 4.6400000000000006 5.4800000000000004 6.4199999999999999 7.4600000000000000 8.5999999999999996 10.990000000000000 15.665533905932739 23.300724434316031 34.440724434316031 49.556149293689714 - dzsoi: 2.0000000000000000E-002 4.0000000000000001E-002 5.9999999999999998E-002 8.0000000000000002E-002 0.12000000000000000 0.16000000000000000 0.20000000000000001 0.23999999999999999 0.28000000000000003 0.32000000000000001 0.36000000000000004 0.40000000000000002 0.44000000000000000 0.54000000000000004 0.64000000000000001 0.73999999999999999 0.84000000000000008 0.93999999999999995 1.0400000000000000 1.1400000000000001 2.3900000000000001 4.6755339059327383 7.6351905283832906 11.140000000000001 15.115424859373686 - dzsoi_decomp: 2.0000000000000000E-002 4.0000000000000001E-002 5.9999999999999998E-002 8.0000000000000002E-002 0.12000000000000000 0.16000000000000000 0.20000000000000001 0.23999999999999999 0.28000000000000003 0.32000000000000001 0.36000000000000004 0.40000000000000002 0.44000000000000000 0.54000000000000004 0.64000000000000001 0.73999999999999999 0.84000000000000008 0.93999999999999995 1.0400000000000000 1.1400000000000001 2.3900000000000001 4.6755339059327383 7.6351905283832906 11.140000000000001 15.115424859373686 - not using use_bedrock!! - jmin_bedrock: 6 - dzmin = 1.0000000000000000E-002 1.4999999999999999E-002 2.5000000000000001E-002 5.5000000000000000E-002 0.11500000000000000 0.23500000000000001 0.47500000000000003 0.95500000000000007 1.9150000000000000 3.8350000000000000 7.6749999999999998 15.355000000000000 - dzmax_l = 2.9999999999999999E-002 7.0000000000000007E-002 0.17999999999999999 0.41000000000000003 0.88000000000000012 1.8300000000000001 3.7400000000000002 7.5700000000000003 15.240000000000000 30.590000000000000 61.299999999999997 1.7976931348623157E+308 - dzmax_u = 2.0000000000000000E-002 5.0000000000000003E-002 0.11000000000000000 0.23000000000000001 0.47000000000000003 0.95000000000000007 1.9100000000000001 3.8300000000000001 7.6699999999999999 15.350000000000000 30.710000000000001 1.7976931348623157E+308 - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - atm2lnd_inparm settings: - repartition_rain_snow = T - glcmec_downscale_longwave = T - lapse_rate = 6.0000000000000001E-003 - lapse_rate_longwave = 3.2000000000000001E-002 - longwave_downscaling_limit = 0.50000000000000000 - precip_repartition_glc_all_snow_t = -2.0000000000000000 - precip_repartition_glc_all_rain_t = 0.0000000000000000 - precip_repartition_nonglc_all_snow_t = 0.0000000000000000 - precip_repartition_nonglc_all_rain_t = 2.0000000000000000 - - Read in lnd2atm_inparm namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - lnd2atm_inparm settings: -&LND2ATM_INPARM - MELT_NON_ICESHEET_ICE_RUNOFF=T, - / - - Read in clm_soilstate_inparm namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - (GETFIL): attempting to find local file clm5_params.c200402.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/clm5_params.c200402.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/paramdata/clm5_params.c200402.nc 589824 - Attempting to read soil color, sand and clay boundary data ..... - (GETFIL): attempting to find local file surfdata_ALP1_simyr2000.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc 589824 - Attempting to read organic matter data ..... - organicrd /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc - (GETFIL): attempting to find local file surfdata_ALP1_simyr2000.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc 655360 - Successfully read organic matter data - - Read in water_tracers namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - water_tracers settings -&WATER_TRACERS_INPARM - ENABLE_WATER_TRACER_CONSISTENCY_CHECKS=F, - ENABLE_WATER_ISOTOPES=F, - / - - Read in aerosol namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - aerosol settings: -&AEROSOL - FRESH_SNW_RDS_MAX= 204.52600000000001 , - / - - Read in friction_velocity namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - friction_velocity settings: -&FRICTION_VELOCITY - ZETAMAXSTABLE= 0.50000000000000000 , - / - - (GETFIL): attempting to find local file surfdata_ALP1_simyr2000.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc 589824 - ncd_inqvid: variable ETALAKE is not on dataset - WARNING:: ETALAKE not found on surface data set. All lake columns will have eta set equal to default value as a function of depth. - ncd_inqvid: variable LAKEFETCH is not on dataset - WARNING:: LAKEFETCH not found on surface data set. All lake columns will have fetch set equal to default value as a function of depth. - Attempting to initialize time invariant variables for lakes - Successfully initialized time invariant variables for lakes - Read in clm_soilhydrology_inparm namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - (GETFIL): attempting to find local file surfdata_ALP1_simyr2000.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc 589824 - Attempting to read soil colo data ..... - Read in scf_swenson_lawrence_2012_inparm namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - scf_swenson_lawrence_2012_inparm settings: -&SCF_SWENSON_LAWRENCE_2012_INPARM - INT_SNOW_MAX= 2000.0000000000000 , - N_MELT_GLCMEC= 10.000000000000000 , - / - - Read in irrigation_inparm namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - irrigation_inparm settings: - irrig_min_lai = 0.0000000000000000 - irrig_start_time = 21600 - irrig_length = 14400 - irrig_target_smp = -3400.0000000000000 - irrig_depth = 0.59999999999999998 - irrig_threshold_fraction = 1.0000000000000000 - limit_irrigation_if_rof_enabled = F - use_groundwater_irrigation = F - irrig_method_default = drip - - Spinup_state 0 - Spinup factors 1.0000000000000000 1.0000000000000000 1.0000000000000000 1.0000000000000000 5.0000000000000000 222.22222900390625 - (GETFIL): attempting to find local file surfdata_ALP1_simyr2000.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/surfdata_map/ALP1/surfdata_ALP1_simyr2000.nc 589824 - Successfully read fmax, soil color, sand and clay boundary data - - Read in lifire_inparm namelist - (OPNFIL): Successfully opened file lnd_in on unit= 96 - - lifire_inparm settings: -&LIFIRE_INPARM - CLI_SCALE= 3.5000000000000003E-002, - BOREAL_PEATFIRE_C= 4.1999999999999998E-005, - POT_HMN_IGN_COUNTS_ALPHA= 3.5000000000000001E-003, - NON_BOREAL_PEATFIRE_C= 1.0000000000000000E-003, - CROPFIRE_A1= 0.29999999999999999 , - RH_LOW= 30.000000000000000 , - RH_HGH= 80.000000000000000 , - BT_MIN= 0.29999999999999999 , - BT_MAX= 0.69999999999999996 , - OCCUR_HI_GDP_TREE= 0.39000000000000001 , - LFUEL= 75.000000000000000 , - UFUEL= 650.00000000000000 , - CMB_CMPLT_FACT= 0.50000000000000000 , 0.25000000000000000 , - / - - - Initializing variables for time accumulation ..... ------------------------------------------------------------- - Accumulated fields - No Name Units Type Period Inival Description -_______________________________________________________________________ - 1 FSD24 W/m2 runmean 48 0. 24hr average of direct solar radiation - 2 FSD240 W/m2 runmean 480 0. 240hr average of direct solar radiation - 3 FSI24 W/m2 runmean 48 0. 24hr average of diffuse solar radiation - 4 FSI240 W/m2 runmean 480 0. 240hr average of diffuse solar radiation - 5 WIND24 m runmean 48 0. 24hr average of wind - 6 T_VEG24 K runmean 48 0. 24hr average of vegetation temperature - 7 T_VEG240 K runmean 480 0. 240hr average of vegetation temperature - 8 TREFAV K timeavg 2 0. average over an hour of 2-m temperature - 9 TREFAV_U K timeavg 2 0. average over an hour of urban 2-m temper - 10 TREFAV_R K timeavg 2 0. average over an hour of rural 2-m temper - 11 T10 K runmean 480 293. 10-day running mean of 2-m temperature - 12 PREC24 m runmean 48 0. 24hr sum of precipitation - 13 RH24 m runmean 48 100. 24hr average of RH - 14 BTRANAV - timeavg 2 0. average over an hour of btran - 15 FSUN24 fraction runmean 48 0. 24hr average of diffuse solar radiation - 16 FSUN240 fraction runmean 480 0. 240hr average of diffuse solar radiation - 17 LAI240 m2/m2 runmean 480 0. 240hr average of leaf area index -_______________________________________________________________________ - ------------------------------------------------------------- - Successfully initialized variables for accumulation - - Attempting to read snow optical properties ..... - (GETFIL): attempting to find local file snicar_optics_5bnd_c090915.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/snicardata/snicar_optics_5bnd_c090915.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/snicardata/snicar_optics_5bnd_c090915.nc 458752 - SnowOptics_init /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/snicardata/snicar_optics_5bnd_c090915.nc - Successfully read snow optical properties - SNICAR: Mie single scatter albedos for direct-beam ice, rds=100um: 0.99998855464297542 0.99968103719886303 0.99760760567597084 0.98649793425058974 0.86362501115905810 - SNICAR: Mie single scatter albedos for diffuse ice, rds=100um: 0.99998868830564358 0.99969570486702131 0.99764126147987453 0.98842452132814818 0.87409591319270097 - SNICAR: Excluding OC aerosols from snow radiative transfer calculations - SNICAR: Mie single scatter albedos for hydrophillic BC: 0.51594530551280438 0.43431362653642447 0.34610376599263543 0.27552292633055464 0.13857609644281504 - SNICAR: Mie single scatter albedos for hydrophobic BC: 0.28768531597618147 0.18657727712522390 0.12315223708920099 8.8346288590554295E-002 4.0342156226937813E-002 - SNICAR: Mie single scatter albedos for dust species 1: 0.97891105715304971 0.99417591604245092 0.99335758076220670 0.99254575131626566 0.95329155004677202 - SNICAR: Mie single scatter albedos for dust species 2: 0.94375224880279296 0.98419166859941920 0.98930906391702478 0.99179394683626376 0.98299959066891252 - SNICAR: Mie single scatter albedos for dust species 3: 0.90404453064604895 0.96465162969455487 0.96827580955152159 0.97259841987410656 0.97761241832987633 - SNICAR: Mie single scatter albedos for dust species 4: 0.84981819535541647 0.94046032504434285 0.94831630553416912 0.95284117511780686 0.95537952819380212 - - Attempting to read snow aging parameters ..... - (GETFIL): attempting to find local file snicar_drdt_bst_fit_60_c070416.nc - (GETFIL): using /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/snicardata/snicar_drdt_bst_fit_60_c070416.nc - Opened existing file /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/snicardata/snicar_drdt_bst_fit_60_c070416.nc 458752 - SnowOptics_init /opt/uio/tmp/tmpqayq__51/job_working_directory/000/2/working/inputdata/lnd/clm2/snicardata/snicar_drdt_bst_fit_60_c070416.nc - Successfully read snow aging properties - SNICAR: snowage tau for T=263K, dTdz = 100 K/m, rhos = 150 kg/m3: 6.3205800298267860 - SNICAR: snowage kappa for T=263K, dTdz = 100 K/m, rhos = 150 kg/m3: 1.5669689418953008 - SNICAR: snowage dr/dt_0 for T=263K, dTdz = 100 K/m, rhos = 150 kg/m3: 5.4872755027422642 - CLM_hist_printflds : number of master fields = 882 - ******* MASTER FIELD LIST ******* - 1 SNO_Z m - 2 SNO_Z_ICE m - 3 ZII m - 4 SWBGT C - 5 SWBGT_U C - 6 SWBGT_R C - 7 HUMIDEX C - 8 HUMIDEX_U C - 9 HUMIDEX_R C - 10 WBT C - 11 WBT_U C - 12 WBT_R C - 13 HIA C - 14 HIA_U C - 15 HIA_R C - 16 TBUILD_MAX K - 17 WIND m/s - 18 Wind m/s - 19 ZBOT m - 20 ATM_TOPO m - 21 FSDS W/m^2 - 22 PCO2 Pa - 23 SWdown W/m^2 - 24 Tair_from_atm K - 25 TBOT K - 26 Tair K - 27 PBOT Pa - 28 PSurf Pa - 29 FLDS W/m^2 - 30 LWdown W/m^2 - 31 FLDS_ICE W/m^2 - 32 THBOT K - 33 FSI24 K - 34 FSI240 K - 35 FSD24 K - 36 FSD240 K - 37 FSH_TO_COUPLER W/m^2 - 38 FSH_RUNOFF_ICE_TO_LIQ W/m^2 - 39 FCO2 kgCO2/m2/s - 40 ICE_MODEL_FRACTION unitless - 41 QICE_FORC mm/s - 42 TSRF_FORC K - 43 TOPO_FORC m - 44 TH2OSFC K - 45 TG_U K - 46 TLAKE K - 47 SNO_T K - 48 SNO_T_ICE K - 49 TSA K - 50 TSA_ICE K - 51 TSA_R K - 52 TREFMNAV K - 53 TREFMXAV K - 54 TREFMNAV_R K - 55 TREFMXAV_R K - 56 TSA_U K - 57 TREFMNAV_U K - 58 TREFMXAV_U K - 59 TV K - 60 TSKIN K - 61 TG K - 62 TG_ICE K - 63 TG_R K - 64 TSOI K - 65 TSOI_ICE K - 66 TSOI_10CM K - 67 TSL K - 68 SNOTXMASS K kg/m2 - 69 SNOTXMASS_ICE K kg/m2 - 70 T10 K - 71 TBUILD K - 72 TROOF_INNER K - 73 TSUNW_INNER K - 74 TSHDW_INNER K - 75 TFLOOR K - 76 HEAT_CONTENT1 J/m^2 - 77 HEAT_CONTENT1_VEG J/m^2 - 78 HEAT_CONTENT2 J/m^2 - 79 LIQUID_WATER_TEMP1 K - 80 SNOTTOPL K - 81 SNOTTOPL_ICE K - 82 SNOdTdzL K/m - 83 TV24 K - 84 TV240 K - 85 ALT m - 86 ALTMAX m - 87 ALTMAX_LASTYEAR m - 88 ELAI m^2/m^2 - 89 ESAI m^2/m^2 - 90 TLAI m^2/m^2 - 91 TSAI m^2/m^2 - 92 LAISUN m^2/m^2 - 93 LAISHA m^2/m^2 - 94 FSUN proportion - 95 HTOP m - 96 HBOT m - 97 DISPLA m - 98 Z0M m - 99 FSUN24 K - 100 FSUN240 K - 101 LAI240 m^2/m^2 - 102 RSCANOPY s m-1 - 103 SMP mm - 104 KROOT 1/s - 105 KSOIL 1/s - 106 SOILPSI MPa - 107 SNO_TK W/m-K - 108 SNO_TK_ICE W/m-K - 109 HK mm/s - 110 SoilAlpha unitless - 111 SoilAlpha_U unitless - 112 SOILRESIS s/m - 113 DSL mm - 114 SNO_LIQH2O kg/m2 - 115 SNO_ICE kg/m2 - 116 H2OSOI mm3/mm3 - 117 SOILLIQ kg/m2 - 118 SOILICE kg/m2 - 119 SNOCAN mm - 120 LIQCAN mm - 121 H2OSFC mm - 122 WA mm - 123 INT_SNOW mm - 124 INT_SNOW_ICE mm - 125 SNOW_PERSISTENCE seconds - 126 H2OCAN mm - 127 SOILWATER_10CM kg/m2 - 128 TWS mm - 129 Q2M kg/kg - 130 SNOWLIQ kg/m2 - 131 SNOWLIQ_ICE kg/m2 - 132 SNOWICE kg/m2 - 133 SNOWICE_ICE kg/m2 - 134 H2OSNO mm - 135 H2OSNO_ICE mm - 136 TOTSOILLIQ kg/m2 - 137 TOTSOILICE kg/m2 - 138 RH2M % - 139 RH2M_R % - 140 RH2M_U % - 141 RHAF fraction - 142 FH2OSFC unitless - 143 FH2OSFC_NOSNOW unitless - 144 FSNO unitless - 145 FSNO_ICE unitless - 146 FSNO_EFF unitless - 147 SNOW_DEPTH m - 148 SNOW_DEPTH_ICE m - 149 SNOWDP m - 150 H2OSNO_TOP kg/m2 - 151 SNORDSL m^-6 - 152 SNOLIQFL fraction - 153 SNO_EXISTENCE unitless - 154 SNO_BW kg/m3 - 155 SNO_BW_ICE kg/m3 - 156 SNO_GS Microns - 157 SNO_GS_ICE Microns - 158 QINTR mm/s - 159 SNOW_SOURCES mm/s - 160 SNOW_SINKS mm/s - 161 LIQUID_CONTENT1 mm - 162 LIQUID_CONTENT2 mm - 163 ICE_CONTENT1 mm - 164 ICE_CONTENT2 mm - 165 ERRH2O mm - 166 ERRH2OSNO mm - 167 QDIRECT_THROUGHFALL mm/s - 168 QDIRECT_THROUGHFALL_SNOW mm/s - 169 QDRIP mm/s - 170 QDRIP_SNOW mm/s - 171 QSNOUNLOAD mm/s - 172 QTOPSOIL mm/s - 173 QINFL mm/s - 174 QOVER mm/s - 175 QRGWL mm/s - 176 QDRAI mm/s - 177 QDRAI_PERCH mm/s - 178 QFLX_LIQ_DYNBAL mm/s - 179 QFLX_ICE_DYNBAL mm/s - 180 QRUNOFF mm/s - 181 QRUNOFF_ICE mm/s - 182 QRUNOFF_U mm/s - 183 QRUNOFF_R mm/s - 184 QSNOMELT mm/s - 185 QSNOMELT_ICE mm/s - 186 QSNOFRZ kg/m2/s - 187 QSNOFRZ_ICE mm/s - 188 SNO_FRZ kg/m2/s - 189 SNO_FRZ_ICE mm/s - 190 QFLX_SNOW_DRAIN mm/s - 191 QFLX_SNOW_DRAIN_ICE mm/s - 192 QSOIL mm/s - 193 QSOIL_ICE mm/s - 194 QVEGE mm/s - 195 QVEGT mm/s - 196 QSNOCPLIQ mm H2O/s - 197 QSNWCPICE mm H2O/s - 198 QICE mm/s - 199 QICE_FRZ mm/s - 200 QICE_MELT mm/s - 201 QFLX_LIQ_GRND mm H2O/s - 202 QFLX_SNOW_GRND mm H2O/s - 203 QFLX_LIQEVAP_FROM_TOP_LAYER mm H2O/s - 204 QFLX_EVAP_VEG mm H2O/s - 205 QFLX_EVAP_TOT kg m-2 s-1 - 206 QFLX_LIQDEW_TO_TOP_LAYER mm H2O/s - 207 QFLX_SOLIDEVAP_FROM_TOP_LAYER mm H2O/s - 208 QFLX_SOLIDEVAP_FROM_TOP_LAYER_IC mm H2O/s - 209 QFLX_SOLIDDEW_TO_TOP_LAYER mm H2O/s - 210 QDRAI_XS mm/s - 211 QH2OSFC_TO_ICE mm/s - 212 QIRRIG_FROM_SURFACE mm/s - 213 QIRRIG_FROM_GW_UNCONFINED mm/s - 214 QIRRIG_FROM_GW_CONFINED mm/s - 215 QIRRIG_DRIP mm/s - 216 QIRRIG_SPRINKLER mm/s - 217 SNO_MELT mm/s - 218 SNO_MELT_ICE mm/s - 219 QROOTSINK mm/s - 220 QSNO_WINDUNLOAD mm/s - 221 QSNO_TEMPUNLOAD mm/s - 222 QSNOEVAP mm/s - 223 QH2OSFC mm/s - 224 QPHSNEG mm/s - 225 AnnET mm/s - 226 QRUNOFF_TO_COUPLER mm/s - 227 QRUNOFF_ICE_TO_COUPLER mm/s - 228 QRUNOFF_ICE_TO_LIQ mm/s - 229 RAIN_FROM_ATM mm/s - 230 SNOW_FROM_ATM mm/s - 231 QBOT kg/kg - 232 Qair kg/kg - 233 QFLOOD mm/s - 234 RAIN mm/s - 235 Rainf mm/s - 236 RAIN_ICE mm/s - 237 SNOW mm/s - 238 SNOW_ICE mm/s - 239 VOLR m3 - 240 VOLRMCH m3 - 241 RH % - 242 EFLX_DYNBAL W/m^2 - 243 FSM W/m^2 - 244 FSM_ICE W/m^2 - 245 FSM_R W/m^2 - 246 FSM_U W/m^2 - 247 FIRA W/m^2 - 248 FIRA_ICE W/m^2 - 249 FIRA_R W/m^2 - 250 FIRE W/m^2 - 251 LWup W/m^2 - 252 FIRE_ICE W/m^2 - 253 FIRE_R W/m^2 - 254 FCTR W/m^2 - 255 FCEV W/m^2 - 256 FGEV W/m^2 - 257 FSH W/m^2 - 258 FSH_ICE W/m^2 - 259 FSH_R W/m^2 - 260 Qh W/m^2 - 261 Qle W/m^2 - 262 EFLX_LH_TOT W/m^2 - 263 EFLX_LH_TOT_ICE W/m^2 - 264 EFLX_LH_TOT_R W/m^2 - 265 Qstor W/m^2 - 266 FSH_V W/m^2 - 267 FSH_G W/m^2 - 268 FGR W/m^2 - 269 FGR_ICE W/m^2 - 270 FGR_R W/m^2 - 271 FIRA_U W/m^2 - 272 EFLX_SOIL_GRND W/m^2 - 273 FIRE_U W/m^2 - 274 FSH_U W/m^2 - 275 FSH_PRECIP_CONVERSION W/m^2 - 276 EFLX_LH_TOT_U W/m^2 - 277 FGR_U W/m^2 - 278 Rnet W/m^2 - 279 EFLX_GRND_LAKE W/m^2 - 280 EFLXBUILD W/m^2 - 281 URBAN_AC W/m^2 - 282 URBAN_HEAT W/m^2 - 283 DGNETDT W/m^2/K - 284 FGR12 W/m^2 - 285 FGR_SOIL_R watt/m^2 - 286 TRAFFICFLUX W/m^2 - 287 WASTEHEAT W/m^2 - 288 HEAT_FROM_AC W/m^2 - 289 TAUX kg/m/s^2 - 290 Qtau kg/m/s^2 - 291 TAUY kg/m/s^2 - 292 BTRAN unitless - 293 BTRANMN unitless - 294 BTRAN2 unitless - 295 ERRSOI W/m^2 - 296 ERRSEB W/m^2 - 297 ERRSOL W/m^2 - 298 DSTDEP kg/m^2/s - 299 BCDEP kg/m^2/s - 300 OCDEP kg/m^2/s - 301 SNOBCMCL kg/m2 - 302 SNOBCMSL kg/m2 - 303 SNOOCMCL kg/m2 - 304 SNOOCMSL kg/m2 - 305 SNODSTMCL kg/m2 - 306 SNODSTMSL kg/m2 - 307 Z0MG m - 308 Z0HG m - 309 Z0QG m - 310 VA m/s - 311 U10 m/s - 312 U10_ICE m/s - 313 U10_DUST m/s - 314 LAKEICEFRAC unitless - 315 LAKEICEFRAC_SURF unitless - 316 LAKEICETHICK m - 317 TKE1 W/(mK) - 318 RAM_LAKE s/m - 319 UST_LAKE m/s - 320 RH_LEAF fraction - 321 LNC gN leaf/m^2 - 322 RSSUN s/m - 323 RSSHA s/m - 324 GSSUN umol H20/m2/s - 325 GSSHA umol H20/m2/s - 326 GSSUNLN umol H20/m2/s - 327 GSSHALN umol H20/m2/s - 328 QCHARGE mm/s - 329 NSUBSTEPS unitless - 330 FROST_TABLE m - 331 ZWT m - 332 ZWT_PERCH m - 333 FCOV unitless - 334 FSAT unitless - 335 FSA W/m^2 - 336 FSA_ICE W/m^2 - 337 FSA_R W/m^2 - 338 FSA_U W/m^2 - 339 FSR W/m^2 - 340 SWup W/m^2 - 341 FSR_ICE W/m^2 - 342 SNO_ABS W/m^2 - 343 SNO_ABS_ICE W/m^2 - 344 SABV W/m^2 - 345 SABG W/m^2 - 346 SABG_PEN watt/m^2 - 347 FSDSND W/m^2 - 348 FSDSNI W/m^2 - 349 FSDSNDLN W/m^2 - 350 FSRND W/m^2 - 351 FSRNI W/m^2 - 352 FSRNDLN W/m^2 - 353 SNOINTABS - - 354 COSZEN none - 355 ALBGRD proportion - 356 ALBGRI proportion - 357 ALBD proportion - 358 ALBI proportion - 359 FSDSVD W/m^2 - 360 FSDSVI W/m^2 - 361 FSRVD W/m^2 - 362 FSRVI W/m^2 - 363 FSDSVDLN W/m^2 - 364 FSDSVILN W/m^2 - 365 PARVEGLN W/m^2 - 366 FSRVDLN W/m^2 - 367 SNOFSDSVD W/m^2 - 368 SNOFSDSND W/m^2 - 369 SNOFSDSVI W/m^2 - 370 SNOFSDSNI W/m^2 - 371 SNOFSRVD W/m^2 - 372 SNOFSRND W/m^2 - 373 SNOFSRVI W/m^2 - 374 SNOFSRNI W/m^2 - 375 DSTFLXT kg/m2/s - 376 DPVLTRB1 m/s - 377 DPVLTRB2 m/s - 378 DPVLTRB3 m/s - 379 DPVLTRB4 m/s - 380 QIRRIG_DEMAND mm/s - 381 TOPO_COL m - 382 TOPO_COL_ICE m - 383 SOILC_vr gC/m^3 - 384 LITR1C_vr gC/m^3 - 385 LITR1C gC/m^2 - 386 LITR1C_1m gC/m^2 - 387 LITR2C_vr gC/m^3 - 388 LITR2C gC/m^2 - 389 LITR2C_1m gC/m^2 - 390 LITR3C_vr gC/m^3 - 391 LITR3C gC/m^2 - 392 LITR3C_1m gC/m^2 - 393 SOIL1C_vr gC/m^3 - 394 SOIL1C gC/m^2 - 395 SOIL1C_1m gC/m^2 - 396 SOIL2C_vr gC/m^3 - 397 SOIL2C gC/m^2 - 398 SOIL2C_1m gC/m^2 - 399 SOIL3C_vr gC/m^3 - 400 SOIL3C gC/m^2 - 401 SOIL3C_1m gC/m^2 - 402 TOTLITC gC/m^2 - 403 TOTSOMC gC/m^2 - 404 TOTLITC_1m gC/m^2 - 405 TOTSOMC_1m gC/m^2 - 406 COL_CTRUNC gC/m^2 - 407 DYN_COL_SOIL_ADJUSTMENTS_C gC/m^2 - 408 HR gC/m^2/s - 409 LITTERC_HR gC/m^2/s - 410 SOILC_HR gC/m^2/s - 411 SOMC_FIRE gC/m^2/s - 412 K_LITR1 1/s - 413 K_LITR2 1/s - 414 K_LITR3 1/s - 415 K_SOIL1 1/s - 416 K_SOIL2 1/s - 417 K_SOIL3 1/s - 418 LITR1_HR gC/m^2/s - 419 LITR1C_TO_SOIL1C gC/m^2/s - 420 LITR1_HR_vr gC/m^3/s - 421 LITR1C_TO_SOIL1C_vr gC/m^3/s - 422 LITR2_HR gC/m^2/s - 423 LITR2C_TO_SOIL1C gC/m^2/s - 424 LITR2_HR_vr gC/m^3/s - 425 LITR2C_TO_SOIL1C_vr gC/m^3/s - 426 LITR3_HR gC/m^2/s - 427 LITR3C_TO_SOIL2C gC/m^2/s - 428 LITR3_HR_vr gC/m^3/s - 429 LITR3C_TO_SOIL2C_vr gC/m^3/s - 430 SOIL1_HR_S2 gC/m^2/s - 431 SOIL1C_TO_SOIL2C gC/m^2/s - 432 SOIL1_HR_S2_vr gC/m^3/s - 433 SOIL1C_TO_SOIL2C_vr gC/m^3/s - 434 SOIL1_HR_S3 gC/m^2/s - 435 SOIL1C_TO_SOIL3C gC/m^2/s - 436 SOIL1_HR_S3_vr gC/m^3/s - 437 SOIL1C_TO_SOIL3C_vr gC/m^3/s - 438 SOIL2_HR_S1 gC/m^2/s - 439 SOIL2C_TO_SOIL1C gC/m^2/s - 440 SOIL2_HR_S1_vr gC/m^3/s - 441 SOIL2C_TO_SOIL1C_vr gC/m^3/s - 442 SOIL2_HR_S3 gC/m^2/s - 443 SOIL2C_TO_SOIL3C gC/m^2/s - 444 SOIL2_HR_S3_vr gC/m^3/s - 445 SOIL2C_TO_SOIL3C_vr gC/m^3/s - 446 SOIL3_HR gC/m^2/s - 447 SOIL3C_TO_SOIL1C gC/m^2/s - 448 SOIL3_HR_vr gC/m^3/s - 449 SOIL3C_TO_SOIL1C_vr gC/m^3/s - 450 T_SCALAR unitless - 451 W_SCALAR unitless - 452 O_SCALAR unitless - 453 SOM_C_LEACHED gC/m^2/s - 454 M_LITR1C_TO_LEACHING gC/m^2/s - 455 LITR1C_TNDNCY_VERT_TRANS gC/m^3/s - 456 M_LITR2C_TO_LEACHING gC/m^2/s - 457 LITR2C_TNDNCY_VERT_TRANS gC/m^3/s - 458 M_LITR3C_TO_LEACHING gC/m^2/s - 459 LITR3C_TNDNCY_VERT_TRANS gC/m^3/s - 460 M_SOIL1C_TO_LEACHING gC/m^2/s - 461 SOIL1C_TNDNCY_VERT_TRANS gC/m^3/s - 462 M_SOIL2C_TO_LEACHING gC/m^2/s - 463 SOIL2C_TNDNCY_VERT_TRANS gC/m^3/s - 464 M_SOIL3C_TO_LEACHING gC/m^2/s - 465 SOIL3C_TNDNCY_VERT_TRANS gC/m^3/s - 466 HR_vr gC/m^3/s - 467 FATES_c_to_litr_lab_c gC/m^3/s - 468 FATES_c_to_litr_cel_c gC/m^3/s - 469 FATES_c_to_litr_lig_c gC/m^3/s - 470 SOILN_vr gN/m^3 - 471 LITR1N_vr gN/m^3 - 472 LITR1N gN/m^2 - 473 LITR1N_1m gN/m^2 - 474 LITR2N_vr gN/m^3 - 475 LITR2N gN/m^2 - 476 LITR2N_1m gN/m^2 - 477 LITR3N_vr gN/m^3 - 478 LITR3N gN/m^2 - 479 LITR3N_1m gN/m^2 - 480 SOIL1N_vr gN/m^3 - 481 SOIL1N gN/m^2 - 482 SOIL1N_1m gN/m^2 - 483 SOIL2N_vr gN/m^3 - 484 SOIL2N gN/m^2 - 485 SOIL2N_1m gN/m^2 - 486 SOIL3N_vr gN/m^3 - 487 SOIL3N gN/m^2 - 488 SOIL3N_1m gN/m^2 - 489 SMINN gN/m^2 - 490 TOTLITN_1m gN/m^2 - 491 TOTSOMN_1m gN/m^2 - 492 COL_NTRUNC gN/m^2 - 493 SMINN_vr gN/m^3 - 494 TOTLITN gN/m^2 - 495 TOTSOMN gN/m^2 - 496 DYN_COL_SOIL_ADJUSTMENTS_N gN/m^2 - 497 NDEP_TO_SMINN gN/m^2/s - 498 NFIX_TO_SMINN gN/m^2/s - 499 SMINN_TO_SOIL1N_L1 gN/m^2 - 500 LITR1N_TO_SOIL1N gN/m^2 - 501 SMINN_TO_SOIL1N_L1_vr gN/m^3 - 502 LITR1N_TO_SOIL1N_vr gN/m^3 - 503 SMINN_TO_SOIL1N_L2 gN/m^2 - 504 LITR2N_TO_SOIL1N gN/m^2 - 505 SMINN_TO_SOIL1N_L2_vr gN/m^3 - 506 LITR2N_TO_SOIL1N_vr gN/m^3 - 507 SMINN_TO_SOIL2N_L3 gN/m^2 - 508 LITR3N_TO_SOIL2N gN/m^2 - 509 SMINN_TO_SOIL2N_L3_vr gN/m^3 - 510 LITR3N_TO_SOIL2N_vr gN/m^3 - 511 SMINN_TO_SOIL2N_S1 gN/m^2 - 512 SOIL1N_TO_SOIL2N gN/m^2 - 513 SMINN_TO_SOIL2N_S1_vr gN/m^3 - 514 SOIL1N_TO_SOIL2N_vr gN/m^3 - 515 SMINN_TO_SOIL3N_S1 gN/m^2 - 516 SOIL1N_TO_SOIL3N gN/m^2 - 517 SMINN_TO_SOIL3N_S1_vr gN/m^3 - 518 SOIL1N_TO_SOIL3N_vr gN/m^3 - 519 SMINN_TO_SOIL1N_S2 gN/m^2 - 520 SOIL2N_TO_SOIL1N gN/m^2 - 521 SMINN_TO_SOIL1N_S2_vr gN/m^3 - 522 SOIL2N_TO_SOIL1N_vr gN/m^3 - 523 SMINN_TO_SOIL3N_S2 gN/m^2 - 524 SOIL2N_TO_SOIL3N gN/m^2 - 525 SMINN_TO_SOIL3N_S2_vr gN/m^3 - 526 SOIL2N_TO_SOIL3N_vr gN/m^3 - 527 SMINN_TO_SOIL1N_S3 gN/m^2 - 528 SOIL3N_TO_SOIL1N gN/m^2 - 529 SMINN_TO_SOIL1N_S3_vr gN/m^3 - 530 SOIL3N_TO_SOIL1N_vr gN/m^3 - 531 DENIT gN/m^2/s - 532 SOM_N_LEACHED gN/m^2/s - 533 M_LITR1N_TO_LEACHING gN/m^2/s - 534 LITR1N_TNDNCY_VERT_TRANS gN/m^3/s - 535 M_LITR2N_TO_LEACHING gN/m^2/s - 536 LITR2N_TNDNCY_VERT_TRANS gN/m^3/s - 537 M_LITR3N_TO_LEACHING gN/m^2/s - 538 LITR3N_TNDNCY_VERT_TRANS gN/m^3/s - 539 M_SOIL1N_TO_LEACHING gN/m^2/s - 540 SOIL1N_TNDNCY_VERT_TRANS gN/m^3/s - 541 M_SOIL2N_TO_LEACHING gN/m^2/s - 542 SOIL2N_TNDNCY_VERT_TRANS gN/m^3/s - 543 M_SOIL3N_TO_LEACHING gN/m^2/s - 544 SOIL3N_TNDNCY_VERT_TRANS gN/m^3/s - 545 SMINN_TO_DENIT_L1S1 gN/m^2 - 546 SMINN_TO_DENIT_L1S1_vr gN/m^3 - 547 SMINN_TO_DENIT_L2S1 gN/m^2 - 548 SMINN_TO_DENIT_L2S1_vr gN/m^3 - 549 SMINN_TO_DENIT_L3S2 gN/m^2 - 550 SMINN_TO_DENIT_L3S2_vr gN/m^3 - 551 SMINN_TO_DENIT_S1S2 gN/m^2 - 552 SMINN_TO_DENIT_S1S2_vr gN/m^3 - 553 SMINN_TO_DENIT_S1S3 gN/m^2 - 554 SMINN_TO_DENIT_S1S3_vr gN/m^3 - 555 SMINN_TO_DENIT_S2S1 gN/m^2 - 556 SMINN_TO_DENIT_S2S1_vr gN/m^3 - 557 SMINN_TO_DENIT_S2S3 gN/m^2 - 558 SMINN_TO_DENIT_S2S3_vr gN/m^3 - 559 SMINN_TO_DENIT_S3S1 gN/m^2 - 560 SMINN_TO_DENIT_S3S1_vr gN/m^3 - 561 SMINN_TO_DENIT_EXCESS gN/m^2/s - 562 SMINN_LEACHED gN/m^2/s - 563 SMINN_TO_DENIT_EXCESS_vr gN/m^3/s - 564 SMINN_LEACHED_vr gN/m^3/s - 565 POTENTIAL_IMMOB gN/m^2/s - 566 ACTUAL_IMMOB gN/m^2/s - 567 SMINN_TO_PLANT gN/m^2/s - 568 SUPPLEMENT_TO_SMINN gN/m^2/s - 569 GROSS_NMIN gN/m^2/s - 570 NET_NMIN gN/m^2/s - 571 ED_NPATCHES none - 572 ED_NCOHORTS none - 573 TRIMMING none - 574 AREA_PLANT m2 - 575 AREA_TREES m2 - 576 SITE_COLD_STATUS 0,1,2 - 577 SITE_DROUGHT_STATUS 0,1,2,3 - 578 SITE_GDD degC - 579 SITE_NCHILLDAYS days - 580 SITE_NCOLDDAYS days - 581 SITE_DAYSINCE_COLDLEAFOFF days - 582 SITE_DAYSINCE_COLDLEAFON days - 583 SITE_DAYSINCE_DROUGHTLEAFOFF days - 584 SITE_DAYSINCE_DROUGHTLEAFON days - 585 SITE_MEANLIQVOL_DROUGHTPHEN m3/m3 - 586 CANOPY_SPREAD 0-1 - 587 PFTbiomass gC/m2 - 588 PFTleafbiomass gC/m2 - 589 PFTstorebiomass gC/m2 - 590 PFTcrownarea m2/ha - 591 PFTcanopycrownarea m2/ha - 592 PFTnindivs indiv / m2 - 593 RECRUITMENT indiv/ha/yr - 594 MORTALITY indiv/ha/yr - 595 PATCH_AREA_BY_AGE m2/m2 - 596 LAI_BY_AGE m2/m2 - 597 CANOPY_AREA_BY_AGE m2/m2 - 598 NCL_BY_AGE -- - 599 NPATCH_BY_AGE -- - 600 ZSTAR_BY_AGE m - 601 CANOPY_HEIGHT_DIST m2/m2 - 602 LEAF_HEIGHT_DIST m2/m2 - 603 BIOMASS_BY_AGE kgC/m2 - 604 SECONDARY_FOREST_FRACTION m2/m2 - 605 WOOD_PRODUCT gC/m2 - 606 SECONDARY_FOREST_BIOMASS kgC/m2 - 607 SECONDARY_AREA_AGE_ANTHRO_DIST m2/m2 - 608 SECONDARY_AREA_PATCH_AGE_DIST m2/m2 - 609 FIRE_NESTEROV_INDEX none - 610 FIRE_ROS m/min - 611 FIRE_ROS_AREA_PRODUCT m/min - 612 EFFECT_WSPEED none - 613 FIRE_TFC_ROS kgC/m2 - 614 FIRE_TFC_ROS_AREA_PRODUCT kgC/m2 - 615 FIRE_INTENSITY kJ/m/s - 616 FIRE_INTENSITY_AREA_PRODUCT kJ/m/s - 617 FIRE_AREA fraction - 618 FIRE_FUEL_MEF m - 619 FIRE_FUEL_BULKD kg biomass/m3 - 620 FIRE_FUEL_EFF_MOIST m - 621 FIRE_FUEL_SAV per m - 622 SUM_FUEL gC m-2 - 623 FUEL_MOISTURE_NFSC - - 624 AREA_BURNT_BY_PATCH_AGE m2/m2 - 625 FIRE_INTENSITY_BY_PATCH_AGE kJ/m/2 - 626 SUM_FUEL_BY_PATCH_AGE gC / m2 of site - 627 BURNT_LITTER_FRAC_AREA_PRODUCT fraction - 628 LITTER_IN gC m-2 s-1 - 629 LITTER_OUT gC m-2 s-1 - 630 SEED_BANK gC m-2 - 631 SEEDS_IN gC m-2 s-1 - 632 LITTER_IN_ELEM kg ha-1 d-1 - 633 LITTER_OUT_ELEM kg ha-1 d-1 - 634 SEED_BANK_ELEM kg ha-1 - 635 SEEDS_IN_LOCAL_ELEM kg ha-1 d-1 - 636 SEEDS_IN_EXTERN_ELEM kg ha-1 d-1 - 637 SEED_GERM_ELEM kg ha-1 d-1 - 638 SEED_DECAY_ELEM kg ha-1 d-1 - 639 STOREC kgC ha-1 - 640 TOTVEGC kgC ha-1 - 641 SAPWC kgC ha-1 - 642 LEAFC kgC ha-1 - 643 FNRTC kgC ha-1 - 644 REPROC kgC ha-1 - 645 CEFFLUX kgC/ha/day - 646 ED_bstore gC m-2 - 647 ED_bdead gC m-2 - 648 ED_balive gC m-2 - 649 ED_bleaf gC m-2 - 650 ED_bsapwood gC m-2 - 651 ED_bfineroot gC m-2 - 652 ED_biomass gC m-2 - 653 AGB gC m-2 - 654 BIOMASS_CANOPY gC m-2 - 655 BIOMASS_UNDERSTORY gC m-2 - 656 PRIMARYLAND_PATCHFUSION_ERROR m2 m-2 d-1 - 657 DISTURBANCE_RATE_P2P m2 m-2 d-1 - 658 DISTURBANCE_RATE_P2S m2 m-2 d-1 - 659 DISTURBANCE_RATE_S2S m2 m-2 d-1 - 660 DISTURBANCE_RATE_FIRE m2 m-2 d-1 - 661 DISTURBANCE_RATE_LOGGING m2 m-2 d-1 - 662 DISTURBANCE_RATE_TREEFALL m2 m-2 d-1 - 663 DISTURBANCE_RATE_POTENTIAL m2 m-2 d-1 - 664 HARVEST_CARBON_FLUX kg C m-2 d-1 - 665 C_STOMATA umol m-2 s-1 - 666 C_LBLAYER umol m-2 s-1 - 667 NPP gC/m^2/s - 668 GPP gC/m^2/s - 669 AR gC/m^2/s - 670 GROWTH_RESP gC/m^2/s - 671 MAINT_RESP gC/m^2/s - 672 C_STOMATA_BY_AGE umol m-2 s-1 - 673 C_LBLAYER_BY_AGE umol m-2 s-1 - 674 NPP_BY_AGE gC/m^2/s - 675 GPP_BY_AGE gC/m^2/s - 676 GPP_CANOPY gC/m^2/s - 677 AR_CANOPY gC/m^2/s - 678 GPP_UNDERSTORY gC/m^2/s - 679 AR_UNDERSTORY gC/m^2/s - 680 PARSUN_Z_CNLF W/m2 - 681 PARSHA_Z_CNLF W/m2 - 682 PARSUN_Z_CNLFPFT W/m2 - 683 PARSHA_Z_CNLFPFT W/m2 - 684 PARSUN_Z_CAN W/m2 - 685 PARSHA_Z_CAN W/m2 - 686 LAISUN_Z_CNLF m2/m2 - 687 LAISHA_Z_CNLF m2/m2 - 688 LAISUN_Z_CNLFPFT m2/m2 - 689 LAISHA_Z_CNLFPFT m2/m2 - 690 LAISUN_TOP_CAN m2/m2 - 691 LAISHA_TOP_CAN m2/m2 - 692 FABD_SUN_CNLFPFT fraction - 693 FABD_SHA_CNLFPFT fraction - 694 FABI_SUN_CNLFPFT fraction - 695 FABI_SHA_CNLFPFT fraction - 696 FABD_SUN_CNLF fraction - 697 FABD_SHA_CNLF fraction - 698 FABI_SUN_CNLF fraction - 699 FABI_SHA_CNLF fraction - 700 PARPROF_DIR_CNLFPFT W/m2 - 701 PARPROF_DIF_CNLFPFT W/m2 - 702 PARPROF_DIR_CNLF W/m2 - 703 PARPROF_DIF_CNLF W/m2 - 704 FABD_SUN_TOPLF_BYCANLAYER fraction - 705 FABD_SHA_TOPLF_BYCANLAYER fraction - 706 FABI_SUN_TOPLF_BYCANLAYER fraction - 707 FABI_SHA_TOPLF_BYCANLAYER fraction - 708 NET_C_UPTAKE_CNLF gC/m2/s - 709 CROWNAREA_CNLF m2/m2 - 710 CROWNAREA_CAN m2/m2 - 711 DEMOTION_CARBONFLUX gC/m2/s - 712 PROMOTION_CARBONFLUX gC/m2/s - 713 MORTALITY_CARBONFLUX_CANOPY gC/m2/s - 714 MORTALITY_CARBONFLUX_UNDERSTORY gC/m2/s - 715 NPLANT_SCAG plants/ha - 716 NPLANT_CANOPY_SCAG plants/ha - 717 NPLANT_UNDERSTORY_SCAG plants/ha - 718 DDBH_CANOPY_SCAG cm/yr/ha - 719 DDBH_UNDERSTORY_SCAG cm/yr/ha - 720 MORTALITY_CANOPY_SCAG plants/ha/yr - 721 MORTALITY_UNDERSTORY_SCAG plants/ha/yr - 722 NPLANT_SCAGPFT plants/ha - 723 NPP_AGEPFT kgC/m2/yr - 724 BIOMASS_AGEPFT kg C / m2 - 725 SCORCH_HEIGHT m - 726 GPP_SCPF kgC/m2/yr - 727 GPP_CANOPY_SCPF kgC/m2/yr - 728 AR_CANOPY_SCPF kgC/m2/yr - 729 GPP_UNDERSTORY_SCPF kgC/m2/yr - 730 AR_UNDERSTORY_SCPF kgC/m2/yr - 731 NPP_SCPF kgC/m2/yr - 732 NPP_LEAF_SCPF kgC/m2/yr - 733 NPP_SEED_SCPF kgC/m2/yr - 734 NPP_FNRT_SCPF kgC/m2/yr - 735 NPP_BGSW_SCPF kgC/m2/yr - 736 NPP_BGDW_SCPF kgC/m2/yr - 737 NPP_AGSW_SCPF kgC/m2/yr - 738 NPP_AGDW_SCPF kgC/m2/yr - 739 NPP_STOR_SCPF kgC/m2/yr - 740 DDBH_SCPF cm/yr/ha - 741 GROWTHFLUX_SCPF n/yr/ha - 742 GROWTHFLUX_FUSION_SCPF n/yr/ha - 743 DDBH_CANOPY_SCPF cm/yr/ha - 744 DDBH_UNDERSTORY_SCPF cm/yr/ha - 745 BA_SCPF m2/ha - 746 AGB_SCPF kgC/m2 - 747 NPLANT_SCPF N/ha - 748 NPLANT_CAPF N/ha - 749 M1_SCPF N/ha/yr - 750 M2_SCPF N/ha/yr - 751 M3_SCPF N/ha/yr - 752 M4_SCPF N/ha/yr - 753 M5_SCPF N/ha/yr - 754 CROWNFIREMORT_SCPF N/ha/yr - 755 CAMBIALFIREMORT_SCPF N/ha/yr - 756 M6_SCPF N/ha/yr - 757 M7_SCPF N/ha/event - 758 M8_SCPF N/ha/yr - 759 M9_SCPF N/ha/yr - 760 M10_SCPF N/ha/yr - 761 M10_CAPF N/ha/yr - 762 MORTALITY_CANOPY_SCPF N/ha/yr - 763 C13disc_SCPF per mil - 764 BSTOR_CANOPY_SCPF kgC/ha - 765 BLEAF_CANOPY_SCPF kgC/ha - 766 NPLANT_CANOPY_SCPF N/ha - 767 MORTALITY_UNDERSTORY_SCPF N/ha/yr - 768 BSTOR_UNDERSTORY_SCPF kgC/ha - 769 BLEAF_UNDERSTORY_SCPF kgC/ha - 770 NPLANT_UNDERSTORY_SCPF N/ha - 771 CWD_AG_CWDSC gC/m^2 - 772 CWD_BG_CWDSC gC/m^2 - 773 CWD_AG_IN_CWDSC gC/m^2/y - 774 CWD_BG_IN_CWDSC gC/m^2/y - 775 CWD_AG_OUT_CWDSC gC/m^2/y - 776 CWD_BG_OUT_CWDSC gC/m^2/y - 777 AR_SCPF kgC/m2/yr - 778 AR_GROW_SCPF kgC/m2/yr - 779 AR_MAINT_SCPF kgC/m2/yr - 780 AR_DARKM_SCPF kgC/m2/yr - 781 AR_AGSAPM_SCPF kgC/m2/yr - 782 AR_CROOTM_SCPF kgC/m2/yr - 783 AR_FROOTM_SCPF kgC/m2/yr - 784 DDBH_CANOPY_SCLS cm/yr/ha - 785 DDBH_UNDERSTORY_SCLS cm/yr/ha - 786 YESTERDAYCANLEV_CANOPY_SCLS indiv/ha - 787 YESTERDAYCANLEV_UNDERSTORY_SCLS indiv/ha - 788 BA_SCLS m2/ha - 789 AGB_SCLS kgC/m2 - 790 BIOMASS_SCLS kgC/m2 - 791 DEMOTION_RATE_SCLS indiv/ha/yr - 792 PROMOTION_RATE_SCLS indiv/ha/yr - 793 NPLANT_CANOPY_SCLS indiv/ha - 794 LAI_CANOPY_SCLS m2/m2 - 795 SAI_CANOPY_SCLS m2/m2 - 796 MORTALITY_CANOPY_SCLS indiv/ha/yr - 797 NPLANT_UNDERSTORY_SCLS indiv/ha - 798 LAI_UNDERSTORY_SCLS indiv/ha - 799 SAI_UNDERSTORY_SCLS indiv/ha - 800 NPLANT_SCLS indiv/ha - 801 NPLANT_CACLS indiv/ha - 802 M1_SCLS N/ha/yr - 803 M2_SCLS N/ha/yr - 804 M3_SCLS N/ha/yr - 805 M4_SCLS N/ha/yr - 806 M5_SCLS N/ha/yr - 807 M6_SCLS N/ha/yr - 808 M7_SCLS N/ha/event - 809 M8_SCLS N/ha/event - 810 M9_SCLS N/ha/yr - 811 M10_SCLS N/ha/yr - 812 M10_CACLS N/ha/yr - 813 CARBON_BALANCE_CANOPY_SCLS kg C / ha / yr - 814 CARBON_BALANCE_UNDERSTORY_SCLS kg C / ha / yr - 815 MORTALITY_UNDERSTORY_SCLS indiv/ha/yr - 816 TRIMMING_CANOPY_SCLS indiv/ha - 817 TRIMMING_UNDERSTORY_SCLS indiv/ha - 818 CROWN_AREA_CANOPY_SCLS m2/ha - 819 CROWN_AREA_UNDERSTORY_SCLS m2/ha - 820 LEAF_MD_CANOPY_SCLS kg C / ha / yr - 821 ROOT_MD_CANOPY_SCLS kg C / ha / yr - 822 BSTORE_MD_CANOPY_SCLS kg C / ha / yr - 823 BDEAD_MD_CANOPY_SCLS kg C / ha / yr - 824 BSW_MD_CANOPY_SCLS kg C / ha / yr - 825 SEED_PROD_CANOPY_SCLS kg C / ha / yr - 826 NPP_LEAF_CANOPY_SCLS kg C / ha / yr - 827 NPP_FROOT_CANOPY_SCLS kg C / ha / yr - 828 NPP_BSW_CANOPY_SCLS kg C / ha / yr - 829 NPP_BDEAD_CANOPY_SCLS kg C / ha / yr - 830 NPP_BSEED_CANOPY_SCLS kg C / ha / yr - 831 NPP_STORE_CANOPY_SCLS kg C / ha / yr - 832 LEAF_MR kg C / m2 / yr - 833 FROOT_MR kg C / m2 / yr - 834 LIVECROOT_MR kg C / m2 / yr - 835 LIVESTEM_MR kg C / m2 / yr - 836 RDARK_CANOPY_SCLS kg C / ha / yr - 837 LIVESTEM_MR_CANOPY_SCLS kg C / ha / yr - 838 LIVECROOT_MR_CANOPY_SCLS kg C / ha / yr - 839 FROOT_MR_CANOPY_SCLS kg C / ha / yr - 840 RESP_G_CANOPY_SCLS kg C / ha / yr - 841 RESP_M_CANOPY_SCLS kg C / ha / yr - 842 LEAF_MD_UNDERSTORY_SCLS kg C / ha / yr - 843 ROOT_MD_UNDERSTORY_SCLS kg C / ha / yr - 844 BSTORE_MD_UNDERSTORY_SCLS kg C / ha / yr - 845 BDEAD_MD_UNDERSTORY_SCLS kg C / ha / yr - 846 BSW_MD_UNDERSTORY_SCLS kg C / ha / yr - 847 SEED_PROD_UNDERSTORY_SCLS kg C / ha / yr - 848 NPP_LEAF_UNDERSTORY_SCLS kg C / ha / yr - 849 NPP_FROOT_UNDERSTORY_SCLS kg C / ha / yr - 850 NPP_BSW_UNDERSTORY_SCLS kg C / ha / yr - 851 NPP_BDEAD_UNDERSTORY_SCLS kg C / ha / yr - 852 NPP_BSEED_UNDERSTORY_SCLS kg C / ha / yr - 853 NPP_STORE_UNDERSTORY_SCLS kg C / ha / yr - 854 RDARK_UNDERSTORY_SCLS kg C / ha / yr - 855 LIVESTEM_MR_UNDERSTORY_SCLS kg C / ha / yr - 856 LIVECROOT_MR_UNDERSTORY_SCLS kg C / ha / yr - 857 FROOT_MR_UNDERSTORY_SCLS kg C / ha / yr - 858 RESP_G_UNDERSTORY_SCLS kg C / ha / yr - 859 RESP_M_UNDERSTORY_SCLS kg C / ha / yr - 860 NEP gC/m^2/s - 861 Fire_Closs gC/m^2/s - 862 FIRE_FLUX g/m^2/s - 863 CBALANCE_ERROR_FATES mgC/day - 864 ERROR_FATES mg/day - 865 LITTER_FINES_AG_ELEM kg ha-1 - 866 LITTER_FINES_BG_ELEM kg ha-1 - 867 LITTER_CWD_BG_ELEM kg ha-1 - 868 LITTER_CWD_AG_ELEM kg ha-1 - 869 LITTER_CWD kg ha-1 - 870 TOTVEGC_SCPF kgC/ha - 871 LEAFC_SCPF kgC/ha - 872 FNRTC_SCPF kgC/ha - 873 SAPWC_SCPF kgC/ha - 874 STOREC_SCPF kgC/ha - 875 REPROC_SCPF kgC/ha - 876 CEFFLUX_SCPF kg/ha/day - 877 NPP_LEAF kgC/m2/yr - 878 NPP_SEED kgC/m2/yr - 879 NPP_STEM kgC/m2/yr - 880 NPP_FROOT kgC/m2/yr - 881 NPP_CROOT kgC/m2/yr - 882 NPP_STOR kgC/m2/yr - Using cold start initial conditions - hist_htapes_build Initializing clm2 history files ------------------------------------------------------------- - htapes_fieldlist : Included fields tape 1 = 415 - 1 ACTUAL_IMMOB 1 A - 2 AGB 1 A - 3 AGB_SCLS 13 A - 4 AR 1 A - 5 AREA_BURNT_BY_PATCH_AGE 7 A - 6 AREA_PLANT 1 A - 7 AREA_TREES 1 A - 8 AR_CANOPY 1 A - 9 AR_UNDERSTORY 1 A - 10 ATM_TOPO 1 A - 11 BA_SCLS 13 A - 12 BCDEP 1 A - 13 BIOMASS_CANOPY 1 A - 14 BIOMASS_UNDERSTORY 1 A - 15 BTRAN 1 A - 16 BTRAN2 1 A - 17 BTRANMN 1 A - 18 BURNT_LITTER_FRAC_AREA_PRODUCT 6 A - 19 CANOPY_AREA_BY_AGE 7 A - 20 CANOPY_HEIGHT_DIST 6 A - 21 CANOPY_SPREAD 1 A - 22 CBALANCE_ERROR_FATES 1 A - 23 CEFFLUX 1 A - 24 CROWNAREA_CAN 2 A - 25 C_LBLAYER 1 A - 26 C_STOMATA 1 A - 27 DDBH_CANOPY_SCLS 13 A - 28 DDBH_UNDERSTORY_SCLS 13 A - 29 DEMOTION_CARBONFLUX 1 A - 30 DENIT 1 A - 31 DISTURBANCE_RATE_FIRE 1 A - 32 DISTURBANCE_RATE_LOGGING 1 A - 33 DISTURBANCE_RATE_P2P 1 A - 34 DISTURBANCE_RATE_P2S 1 A - 35 DISTURBANCE_RATE_POTENTIAL 1 A - 36 DISTURBANCE_RATE_S2S 1 A - 37 DISTURBANCE_RATE_TREEFALL 1 A - 38 DSL 1 A - 39 DSTDEP 1 A - 40 DSTFLXT 1 A - 41 ED_NCOHORTS 1 A - 42 ED_NPATCHES 1 A - 43 ED_balive 1 A - 44 ED_bdead 1 A - 45 ED_bfineroot 1 A - 46 ED_biomass 1 A - 47 ED_bleaf 1 A - 48 ED_bsapwood 1 A - 49 ED_bstore 1 A - 50 EFFECT_WSPEED 1 A - 51 EFLXBUILD 1 A - 52 EFLX_DYNBAL 1 A - 53 EFLX_GRND_LAKE 1 A - 54 EFLX_LH_TOT 1 A - 55 EFLX_LH_TOT_R 1 A - 56 ELAI 1 A - 57 ERRH2O 1 A - 58 ERRH2OSNO 1 A - 59 ERROR_FATES 1 A - 60 ERRSEB 1 A - 61 ERRSOI 1 A - 62 ERRSOL 1 A - 63 ESAI 1 A - 64 FATES_c_to_litr_cel_c 25 A - 65 FATES_c_to_litr_lab_c 25 A - 66 FATES_c_to_litr_lig_c 25 A - 67 FCEV 1 A - 68 FCOV 1 A - 69 FCTR 1 A - 70 FGEV 1 A - 71 FGR 1 A - 72 FGR12 1 A - 73 FH2OSFC 1 A - 74 FIRA 1 A - 75 FIRA_R 1 A - 76 FIRE 1 A - 77 FIRE_AREA 1 A - 78 FIRE_FLUX 1 A - 79 FIRE_FUEL_BULKD 1 A - 80 FIRE_FUEL_EFF_MOIST 1 A - 81 FIRE_FUEL_MEF 1 A - 82 FIRE_FUEL_SAV 1 A - 83 FIRE_INTENSITY 1 A - 84 FIRE_INTENSITY_AREA_PRODUCT 1 A - 85 FIRE_INTENSITY_BY_PATCH_AGE 7 A - 86 FIRE_NESTEROV_INDEX 1 A - 87 FIRE_R 1 A - 88 FIRE_ROS 1 A - 89 FIRE_ROS_AREA_PRODUCT 1 A - 90 FIRE_TFC_ROS 1 A - 91 FIRE_TFC_ROS_AREA_PRODUCT 1 A - 92 FLDS 1 A - 93 FNRTC 1 A - 94 FROOT_MR 1 A - 95 FSA 1 A - 96 FSAT 1 A - 97 FSDS 1 A - 98 FSDSND 1 A - 99 FSDSNDLN 1 A - 100 FSDSNI 1 A - 101 FSDSVD 1 A - 102 FSDSVDLN 1 A - 103 FSDSVI 1 A - 104 FSDSVILN 1 A - 105 FSH 1 A - 106 FSH_G 1 A - 107 FSH_PRECIP_CONVERSION 1 A - 108 FSH_R 1 A - 109 FSH_RUNOFF_ICE_TO_LIQ 1 A - 110 FSH_TO_COUPLER 1 A - 111 FSH_V 1 A - 112 FSM 1 A - 113 FSNO 1 A - 114 FSNO_EFF 1 A - 115 FSR 1 A - 116 FSRND 1 A - 117 FSRNDLN 1 A - 118 FSRNI 1 A - 119 FSRVD 1 A - 120 FSRVDLN 1 A - 121 FSRVI 1 A - 122 FUEL_MOISTURE_NFSC 6 A - 123 Fire_Closs 1 A - 124 GPP 1 A - 125 GPP_CANOPY 1 A - 126 GPP_UNDERSTORY 1 A - 127 GROSS_NMIN 1 A - 128 GROWTH_RESP 1 A - 129 GSSHA 1 A - 130 GSSHALN 1 A - 131 GSSUN 1 A - 132 GSSUNLN 1 A - 133 H2OCAN 1 A - 134 H2OSFC 1 A - 135 H2OSNO 1 A - 136 H2OSNO_TOP 1 A - 137 H2OSOI 20 A - 138 HARVEST_CARBON_FLUX 1 A - 139 HEAT_CONTENT1 1 A - 140 HEAT_FROM_AC 1 A - 141 HIA 1 A - 142 HIA_R 1 A - 143 HIA_U 1 A - 144 HR 1 A - 145 HR_vr 20 A - 146 HTOP 1 A - 147 HUMIDEX 1 A - 148 HUMIDEX_R 1 A - 149 HUMIDEX_U 1 A - 150 ICE_CONTENT1 1 A - 151 LAISHA 1 A - 152 LAISUN 1 A - 153 LAI_BY_AGE 7 A - 154 LAI_CANOPY_SCLS 13 A - 155 LAI_UNDERSTORY_SCLS 13 A - 156 LAKEICEFRAC_SURF 1 A - 157 LAKEICETHICK 1 A - 158 LEAFC 1 A - 159 LEAF_HEIGHT_DIST 6 A - 160 LEAF_MR 1 A - 161 LIQCAN 1 A - 162 LIQUID_CONTENT1 1 A - 163 LITR1C 1 A - 164 LITR1C_vr 20 A - 165 LITR1N 1 A - 166 LITR1N_vr 25 A - 167 LITR2C 1 A - 168 LITR2C_vr 20 A - 169 LITR2N 1 A - 170 LITR2N_vr 25 A - 171 LITR3C 1 A - 172 LITR3C_vr 20 A - 173 LITR3N 1 A - 174 LITR3N_vr 25 A - 175 LITTERC_HR 1 A - 176 LITTER_CWD 4 A - 177 LITTER_CWD_AG_ELEM 1 A - 178 LITTER_CWD_BG_ELEM 1 A - 179 LITTER_FINES_AG_ELEM 1 A - 180 LITTER_FINES_BG_ELEM 1 A - 181 LITTER_IN 1 A - 182 LITTER_IN_ELEM 1 A - 183 LITTER_OUT 1 A - 184 LITTER_OUT_ELEM 1 A - 185 LIVECROOT_MR 1 A - 186 LIVESTEM_MR 1 A - 187 LNC 1 A - 188 M10_CACLS 2 A - 189 M10_SCLS 13 A - 190 M1_SCLS 13 A - 191 M2_SCLS 13 A - 192 M3_SCLS 13 A - 193 M4_SCLS 13 A - 194 M5_SCLS 13 A - 195 M6_SCLS 13 A - 196 M7_SCLS 13 A - 197 M8_SCLS 13 A - 198 M9_SCLS 13 A - 199 MAINT_RESP 1 A - 200 MORTALITY 12 A - 201 MORTALITY_CANOPY_SCLS 13 A - 202 MORTALITY_CARBONFLUX_CANOPY 1 A - 203 MORTALITY_CARBONFLUX_UNDERSTORY 1 A - 204 MORTALITY_UNDERSTORY_SCLS 13 A - 205 NDEP_TO_SMINN 1 A - 206 NEP 1 A - 207 NET_NMIN 1 A - 208 NFIX_TO_SMINN 1 A - 209 NPLANT_CACLS 2 A - 210 NPLANT_CANOPY_SCLS 13 A - 211 NPLANT_SCAG 91 A - 212 NPLANT_SCLS 13 A - 213 NPLANT_UNDERSTORY_SCLS 13 A - 214 NPP 1 A - 215 NPP_CROOT 1 A - 216 NPP_FROOT 1 A - 217 NPP_LEAF 1 A - 218 NPP_SEED 1 A - 219 NPP_STEM 1 A - 220 NPP_STOR 1 A - 221 OCDEP 1 A - 222 O_SCALAR 20 A - 223 PARVEGLN 1 A - 224 PATCH_AREA_BY_AGE 7 A - 225 PBOT 1 A - 226 PCO2 1 A - 227 PCT_GLC_MEC 10 A - 228 PCT_LANDUNIT 9 A - 229 PFTbiomass 12 A - 230 PFTleafbiomass 12 A - 231 PFTnindivs 12 A - 232 PFTstorebiomass 12 A - 233 POTENTIAL_IMMOB 1 A - 234 PRIMARYLAND_PATCHFUSION_ERROR 1 A - 235 PROMOTION_CARBONFLUX 1 A - 236 Q2M 1 A - 237 QBOT 1 A - 238 QCHARGE 1 A - 239 QDRAI 1 A - 240 QDRAI_PERCH 1 A - 241 QDRAI_XS 1 A - 242 QFLOOD 1 A - 243 QFLX_EVAP_TOT 1 A - 244 QFLX_ICE_DYNBAL 1 A - 245 QFLX_LIQDEW_TO_TOP_LAYER 1 A - 246 QFLX_LIQEVAP_FROM_TOP_LAYER 1 A - 247 QFLX_LIQ_DYNBAL 1 A - 248 QFLX_SNOW_DRAIN 1 A - 249 QFLX_SNOW_DRAIN_ICE 1 A - 250 QFLX_SOLIDDEW_TO_TOP_LAYER 1 A - 251 QFLX_SOLIDEVAP_FROM_TOP_LAYER 1 A - 252 QH2OSFC 1 A - 253 QICE 1 A - 254 QICE_FRZ 1 A - 255 QICE_MELT 1 A - 256 QINFL 1 A - 257 QINTR 1 A - 258 QIRRIG_FROM_GW_CONFINED 1 A - 259 QIRRIG_FROM_GW_UNCONFINED 1 A - 260 QIRRIG_FROM_SURFACE 1 A - 261 QOVER 1 A - 262 QRGWL 1 A - 263 QRUNOFF 1 A - 264 QRUNOFF_ICE 1 A - 265 QRUNOFF_ICE_TO_COUPLER 1 A - 266 QRUNOFF_TO_COUPLER 1 A - 267 QSNOCPLIQ 1 A - 268 QSNOEVAP 1 A - 269 QSNOFRZ 1 A - 270 QSNOFRZ_ICE 1 A - 271 QSNOMELT 1 A - 272 QSNOMELT_ICE 1 A - 273 QSNOUNLOAD 1 A - 274 QSNO_TEMPUNLOAD 1 A - 275 QSNO_WINDUNLOAD 1 A - 276 QSNWCPICE 1 A - 277 QSOIL 1 A - 278 QSOIL_ICE 1 A - 279 QVEGE 1 A - 280 QVEGT 1 A - 281 RAIN 1 A - 282 RAIN_FROM_ATM 1 A - 283 RECRUITMENT 12 A - 284 REPROC 1 A - 285 RH2M 1 A - 286 RSCANOPY 1 A - 287 RSSHA 1 M - 288 RSSUN 1 M - 289 SABG 1 A - 290 SABG_PEN 1 A - 291 SABV 1 A - 292 SAPWC 1 A - 293 SCORCH_HEIGHT 84 A - 294 SEEDS_IN 1 A - 295 SEEDS_IN_EXTERN_ELEM 1 A - 296 SEEDS_IN_LOCAL_ELEM 1 A - 297 SEED_BANK 1 A - 298 SEED_BANK_ELEM 1 A - 299 SEED_DECAY_ELEM 1 A - 300 SEED_GERM_ELEM 1 A - 301 SITE_COLD_STATUS 1 A - 302 SITE_DAYSINCE_COLDLEAFOFF 1 A - 303 SITE_DAYSINCE_COLDLEAFON 1 A - 304 SITE_DAYSINCE_DROUGHTLEAFOFF 1 A - 305 SITE_DAYSINCE_DROUGHTLEAFON 1 A - 306 SITE_DROUGHT_STATUS 1 A - 307 SITE_GDD 1 A - 308 SITE_MEANLIQVOL_DROUGHTPHEN 1 A - 309 SITE_NCHILLDAYS 1 A - 310 SITE_NCOLDDAYS 1 A - 311 SMINN 1 A - 312 SMINN_LEACHED 1 A - 313 SMINN_TO_PLANT 1 A - 314 SMINN_vr 20 A - 315 SMP 25 A - 316 SNOBCMCL 1 A - 317 SNOBCMSL 1 A - 318 SNOCAN 1 A - 319 SNODSTMCL 1 A - 320 SNODSTMSL 1 A - 321 SNOFSRND 1 A - 322 SNOFSRNI 1 A - 323 SNOFSRVD 1 A - 324 SNOFSRVI 1 A - 325 SNOINTABS 1 A - 326 SNOOCMCL 1 A - 327 SNOOCMSL 1 A - 328 SNOTXMASS 1 A - 329 SNOW 1 A - 330 SNOWDP 1 A - 331 SNOWICE 1 A - 332 SNOWLIQ 1 A - 333 SNOW_DEPTH 1 A - 334 SNOW_FROM_ATM 1 A - 335 SNOW_PERSISTENCE 1 I - 336 SNOW_SINKS 1 A - 337 SNOW_SOURCES 1 A - 338 SOIL1C 1 A - 339 SOIL1C_vr 20 A - 340 SOIL1N 1 A - 341 SOIL1N_vr 25 A - 342 SOIL2C 1 A - 343 SOIL2C_vr 20 A - 344 SOIL2N 1 A - 345 SOIL2N_vr 25 A - 346 SOIL3C 1 A - 347 SOIL3C_vr 20 A - 348 SOIL3N 1 A - 349 SOIL3N_vr 25 A - 350 SOILC_HR 1 A - 351 SOILC_vr 20 A - 352 SOILICE 20 A - 353 SOILLIQ 20 A - 354 SOILN_vr 25 A - 355 SOILRESIS 1 A - 356 SOILWATER_10CM 1 A - 357 SOMC_FIRE 1 A - 358 SOM_C_LEACHED 1 A - 359 STOREC 1 A - 360 SUM_FUEL 1 A - 361 SUM_FUEL_BY_PATCH_AGE 7 A - 362 SUPPLEMENT_TO_SMINN 1 A - 363 SWBGT 1 A - 364 SWBGT_R 1 A - 365 SWBGT_U 1 A - 366 TAUX 1 A - 367 TAUY 1 A - 368 TBOT 1 A - 369 TBUILD 1 A - 370 TG 1 A - 371 TH2OSFC 1 A - 372 THBOT 1 A - 373 TKE1 1 A - 374 TLAI 1 A - 375 TLAKE 10 A - 376 TOTLITC 1 A - 377 TOTLITC_1m 1 A - 378 TOTLITN 1 A - 379 TOTLITN_1m 1 A - 380 TOTSOILICE 1 A - 381 TOTSOILLIQ 1 A - 382 TOTSOMC 1 A - 383 TOTSOMC_1m 1 A - 384 TOTSOMN 1 A - 385 TOTSOMN_1m 1 A - 386 TOTVEGC 1 A - 387 TREFMNAV 1 A - 388 TREFMXAV 1 A - 389 TRIMMING 1 A - 390 TSA 1 A - 391 TSAI 1 A - 392 TSKIN 1 A - 393 TSL 1 A - 394 TSOI 25 A - 395 TSOI_10CM 1 A - 396 TSOI_ICE 25 A - 397 TV 1 A - 398 TWS 1 A - 399 T_SCALAR 20 A - 400 U10 1 A - 401 U10_DUST 1 A - 402 URBAN_AC 1 A - 403 URBAN_HEAT 1 A - 404 VOLR 1 A - 405 VOLRMCH 1 A - 406 WA 1 A - 407 WASTEHEAT 1 A - 408 WBT 1 A - 409 WBT_R 1 A - 410 WBT_U 1 A - 411 WIND 1 A - 412 W_SCALAR 20 A - 413 ZBOT 1 A - 414 ZWT 1 A - 415 ZWT_PERCH 1 A - There will be a total of 1 history tapes - - History tape 1 write frequency is MONTHLY - All fields on history tape 1 are grid averaged - Number of time samples on history tape 1 is 120 - Output precision on history tape 1 = 2 - - hist_htapes_build hist tape = 1 written with dov2xy= T - hist_htapes_build Successfully initialized clm2 history files ------------------------------------------------------------- - Successfully initialized the land model - begin initial run at: - nstep= 0 year= 2000 month= 1 day= 1 seconds= 0 - -************************************************************ - - dtime_sync= 1800 dtime_clm= 1800 mod = 0 - clm: completed timestep 0 - clm: calling FATES model 1 -FATES Dynamics: 2000-01-01 - clm: leaving fates model 1 1 - clm: completed timestep 1 - hist_htapes_wrapup : history tape 1 : no open file to close - writing restart file ./test.clm2.r.2000-01-01-01800.nc for model date = 2000-01-01-01800 - - restFile_open: writing restart dataset at ./test.clm2.r.2000-01-01-01800.nc at nstep = 1 - - Opened file ./test.clm2.r.2000-01-01-01800.nc to write 458752 - htape_create : Opening netcdf rhtape ./test.clm2.rh0.2000-01-01-01800.nc - Opened file ./test.clm2.rh0.2000-01-01-01800.nc to write 589824 - htape_create : Successfully defined netcdf restart history file 1 - Successfully wrote local restart file ./test.clm2.r.2000-01-01-01800.nc ------------------------------------------------------------- - - (OPNFIL): Successfully opened file ./rpointer.lnd on unit= 95 - Successfully wrote local restart pointer file - Successfully wrote out restart data at nstep = 1 -------------------------------------------------------------
--- a/test-data/restart_info.txt Wed Oct 21 20:49:19 2020 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,4 +0,0 @@ -test.datm.r.2000-01-01-01800.nc -test.datm.rs1.2000-01-01-01800.bin -test.cpl.r.2000-01-01-01800.nc -./test.clm2.r.2000-01-01-01800.nc
--- a/test-data/rof.log Wed Oct 21 20:49:19 2020 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,14 +0,0 @@ -(rof_init_mct) :MOSART model initialization - mosart npes = 1 - mosart iam = 0 - inst_name = ROF - Read in mosart_inparm namelist from: mosart_in - define run: - run type = initial - coupling_period = 10800 - delt_mosart = 3600 - decomp option = roundrobin - bypass_routing option = direct_in_place - qgwl runoff option = threshold - smat option = Xonly - MOSART will not be active