Mercurial > repos > computational-metabolomics > dimspy_missing_values_sample_filter

comparison missing_values_sample_filter.xml @ 1:2cf12cd2c53a draft

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"planemo upload for repository https://github.com/computational-metabolomics/dimspy-galaxy commit 680116d0cf6a6d7246cba655452dea43269aeba4"
author computational-metabolomics
date Tue, 28 Apr 2020 17:27:23 -0400
parents 91441e41cc3d
children
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0:91441e41cc3d 1:2cf12cd2c53a
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66 Standard DIMS processing workflow: Process Scans -> Replicate Filter -> Align Samples -> **[Missing values sample filter]** -> Blank Filter -> Sample Filter -> Matrix processing -> Statistics 66 Standard DIMS processing workflow: Process Scans -> [Replicate Filter] -> Align Samples -> Blank Filter -> Sample Filter -> **[Missing values sample filter]** -> Pre-processing -> Statistics
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70 This tool is used to remove study samples with greater-than a user-defined “Maximum percentage of missing values” from the peak intensity matrix. A missing value is defined as the absence of a recorded peak intensity value for a specific mass spectral peak, in a specific study sample. 70 This tool is used to remove study samples with greater-than a user-defined “Maximum percentage of missing values” from the peak intensity matrix. A missing value is defined as the absence of a recorded peak intensity value for a specific mass spectral peak, in a specific study sample.
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