comparison process_scans.xml @ 2:bc099f2346a1 draft default tip

"planemo upload for repository https://github.com/computational-metabolomics/dimspy-galaxy commit 80069808371b58f45da0c8133c27d67ac1a5b448"

1:deafa30d6570

<tool id="dimspy_process_scans" name="Process Scans (and SIM-Stitch)" version="@TOOL_VERSION@+galaxy@GALAXY_TOOL_VERSION@">
    <description> - Read, filter and average MS scans</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements" />

                    --exclude-scan-events $se.start $se.end $se.scan_type
                #end if
            #end for
        #end if
        --report '$report'
        &&
        dimspy hdf5-pls-to-txt
        --input '$hdf5_file_out'
        --output .
        --delimiter $delimiter

2:bc099f2346a1

<tool id="dimspy_process_scans" name="Process Scans (and SIM-Stitch)" version="@TOOL_VERSION@+galaxy1">
    <description> - Read, filter and average MS scans</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements" />

                    --exclude-scan-events $se.start $se.end $se.scan_type
                #end if
            #end for
        #end if
        --report '$report'
        --ncpu \${GALAXY_SLOTS:-1}
        &&
        dimspy hdf5-pls-to-txt
        --input '$hdf5_file_out'
        --output .
        --delimiter $delimiter