Mercurial > repos > computational-metabolomics > mspurity_combineannotations

comparison createDatabase.R @ 2:d4376a743f7b draft

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"planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit 242de155f13acd6cb88946e89b5196ac55578aa8"
author computational-metabolomics
date Wed, 01 Apr 2020 11:21:11 -0400
parents 7f3183988100
children 20768ba7f0b4
comparison
equal deleted inserted replaced
1:cf62d2c0104e 2:d4376a743f7b
113 xset <- NULL 113 xset <- NULL
114 } 114 }
115 115
116 116
117 117
118 if(is.null(opt$grp_peaklist)){ 118 if(is.null(opt$grpPeaklist)){
119 grpPeaklist = NA 119 grpPeaklist = NA
120 }else{ 120 }else{
121 grpPeaklist = opt$grp_peaklist 121 grpPeaklist = opt$grpPeaklist
122 } 122 }
123 123
124 124
125 125
126 dbPth <- msPurity::createDatabase(pa, 126 dbPth <- msPurity::createDatabase(pa,