Mercurial > repos > computational-metabolomics > mspurity_createdatabase

comparison createDatabase.R @ 2:a11892cb997d draft

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"planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit 242de155f13acd6cb88946e89b5196ac55578aa8"
author computational-metabolomics
date Wed, 01 Apr 2020 11:17:09 -0400
parents f52287a06c02
children 3d36a391612c
comparison
equal deleted inserted replaced
1:600a866a510c 2:a11892cb997d
113 xset <- NULL 113 xset <- NULL
114 } 114 }
115 115
116 116
117 117
118 if(is.null(opt$grp_peaklist)){ 118 if(is.null(opt$grpPeaklist)){
119 grpPeaklist = NA 119 grpPeaklist = NA
120 }else{ 120 }else{
121 grpPeaklist = opt$grp_peaklist 121 grpPeaklist = opt$grpPeaklist
122 } 122 }
123 123
124 124
125 125
126 dbPth <- msPurity::createDatabase(pa, 126 dbPth <- msPurity::createDatabase(pa,