Mercurial > repos > computational-metabolomics > mspurity_puritya

comparison createDatabase.R @ 2:9b067f4c5f7f draft

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"planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit 242de155f13acd6cb88946e89b5196ac55578aa8"
author computational-metabolomics
date Wed, 01 Apr 2020 11:13:06 -0400
parents 56cce1a90b73
children 1c770b10974a
comparison
equal deleted inserted replaced
1:3d6356bcf998 2:9b067f4c5f7f
113 xset <- NULL 113 xset <- NULL
114 } 114 }
115 115
116 116
117 117
118 if(is.null(opt$grp_peaklist)){ 118 if(is.null(opt$grpPeaklist)){
119 grpPeaklist = NA 119 grpPeaklist = NA
120 }else{ 120 }else{
121 grpPeaklist = opt$grp_peaklist 121 grpPeaklist = opt$grpPeaklist
122 } 122 }
123 123
124 124
125 125
126 dbPth <- msPurity::createDatabase(pa, 126 dbPth <- msPurity::createDatabase(pa,