# HG changeset patch
# User computationaltranscriptomics
# Date 1563177209 14400
# Node ID 5528ee7c99f28789ebcbf3fbd96d59b8752e8a9e
# Parent 8a51813206ace1a8cc529d1e01568b5bbfc95bdc
change in parameter setup for upstream region
diff -r 8a51813206ac -r 5528ee7c99f2 glassgo_wrapper.xml
--- a/glassgo_wrapper.xml Thu Jul 11 17:27:06 2019 -0400
+++ b/glassgo_wrapper.xml Mon Jul 15 03:53:29 2019 -0400
@@ -5,11 +5,17 @@
GLASSgo.py
- -i $input
+ -i ${input_data.input}
+ -d ${input_data.database}
#if str($search.cond_param_setup.param_setup) == "manual":
-e ${search.cond_param_setup.evalue}
-p ${search.cond_param_setup.identity}
#end if
+ -u ${additional_setting.upstream_region}
+ #if str($search.cond_taxon_setup.taxon_setup) == "acclist":
+ -g ${search.cond_taxon_setup.acclist}
+ #end if
+ -o $output
@@ -23,38 +29,15 @@
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