diff test-data/cvt_network.sif @ 2:f5e05d6382c8 draft

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author computationaltranscriptomics
date Tue, 23 Feb 2016 09:17:36 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cvt_network.sif	Tue Feb 23 09:17:36 2016 -0500
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+root pp cellular_organisms
+cellular_organisms pp Bacteria
+Bacteria pp Actinobacteria_<phylum>
+Bacteria pp Aquificae_<phylum>
+Bacteria pp Armatimonadetes
+Bacteria pp Bacteroidetes/Chlorobi_group
+Bacteria pp Caldiserica
+Bacteria pp Chlamydiae/Verrucomicrobia_group
+Bacteria pp Chloroflexi_<phylum>
+Bacteria pp Chrysiogenetes_<phylum>
+Bacteria pp Cyanobacteria
+Cyanobacteria pp environmental_samples_<Cyanobacteria>
+Cyanobacteria pp Gloeobacteria
+Cyanobacteria pp Nostocales
+Cyanobacteria pp Oscillatoriophycideae
+Cyanobacteria pp Pleurocapsales
+Cyanobacteria pp Prochlorales
+Prochlorales pp environmental_samples_<Prochlorophytes>
+Prochlorales pp Prochloraceae
+Prochlorales pp Prochlorococcaceae
+Prochlorococcaceae pp Prochlorococcus
+Prochlorococcus pp environmental_samples_<Prochlorococcus>
+Prochlorococcus pp Prochlorococcus_marinus
+Prochlorococcus_marinus pp environmental_samples_<Prochlorococcus_marinus>
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._AS9601
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._CCMP1377
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._GP2
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9107
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9116
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9201
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9202
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9211
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9215
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9301
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9302
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9303
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9312
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9313
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._MIT_9515
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._NATL1A
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._NATL1MIT
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._NATL2A
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._PAC1
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._PAC1A
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._PAC1B
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._PAC2
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._RS2001
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._RS810
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._SB
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._TAK9803
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._TAK9803-2
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._TATL1
+Prochlorococcus_marinus pp Prochlorococcus_marinus_str._TATL1B
+Prochlorococcus_marinus pp Prochlorococcus_marinus_subsp._marinus
+Prochlorococcus_marinus pp Prochlorococcus_marinus_subsp._pastoris
+Prochlorococcus pp Prochlorococcus_sp.
+Prochlorales pp Prochlorotrichaceae
+Cyanobacteria pp Stigonematales
+Cyanobacteria pp unclassified_Cyanobacteria
+Bacteria pp Deferribacteres_<phylum>
+Bacteria pp Deinococcus-Thermus
+Bacteria pp Dictyoglomi
+Bacteria pp Elusimicrobia
+Bacteria pp environmental_samples_<Bacteria>
+Bacteria pp Fibrobacteres/Acidobacteria_group
+Bacteria pp Firmicutes
+Bacteria pp Fusobacteria
+Bacteria pp Gemmatimonadetes
+Bacteria pp Nitrospinae
+Bacteria pp Nitrospirae
+Bacteria pp Planctomycetes
+Bacteria pp Proteobacteria
+Bacteria pp Spirochaetes
+Bacteria pp Synergistetes
+Bacteria pp Tenericutes
+Bacteria pp Thermodesulfobacteria_<phylum>
+Bacteria pp Thermotogae_<phylum>
+Bacteria pp unclassified_Bacteria
+cellular_organisms pp Archaea
+cellular_organisms pp Eukaryota
+root pp Viruses
+Viruses pp dsDNA_viruses,_no_RNA_stage
+Viruses pp dsRNA_viruses
+Viruses pp environmental_samples_<viruses>
+Viruses pp Retro-transcribing_viruses
+Viruses pp ssDNA_viruses
+Viruses pp ssRNA_viruses
+Viruses pp unassigned_viruses
+Viruses pp unclassified_phages
+Viruses pp unclassified_viruses
+root pp unclassified_sequences
+root pp other_sequences
+root pp Not_assigned
+Viruses pp not_assigned_Viruses
+Prochlorococcus_marinus pp not_assigned_Prochlorococcus_marinus
+Prochlorococcus pp not_assigned_Prochlorococcus
+Prochlorales pp not_assigned_Prochlorales
+Cyanobacteria pp not_assigned_Cyanobacteria
+Bacteria pp not_assigned_Bacteria
+cellular_organisms pp not_assigned_cellular_organisms
+root pp not_assigned_root