# HG changeset patch # User cpt # Date 1655468398 0 # Node ID 6a4d1bd8ac1dafd536c4c2864b46aa6c0e252416 Uploaded diff -r 000000000000 -r 6a4d1bd8ac1d cpt_annotation_table/cpt-macros.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cpt_annotation_table/cpt-macros.xml Fri Jun 17 12:19:58 2022 +0000 @@ -0,0 +1,115 @@ + + + + + python + biopython + requests + + + + + + + + 10.1371/journal.pcbi.1008214 + @unpublished{galaxyTools, + author = {E. Mijalis, H. Rasche}, + title = {CPT Galaxy Tools}, + year = {2013-2017}, + note = {https://github.com/tamu-cpt/galaxy-tools/} + } + + + + + 10.1371/journal.pcbi.1008214 + + @unpublished{galaxyTools, + author = {E. Mijalis, H. Rasche}, + title = {CPT Galaxy Tools}, + year = {2013-2017}, + note = {https://github.com/tamu-cpt/galaxy-tools/} + } + + + + + + + 10.1371/journal.pcbi.1008214 + + @unpublished{galaxyTools, + author = {C. Ross}, + title = {CPT Galaxy Tools}, + year = {2020-}, + note = {https://github.com/tamu-cpt/galaxy-tools/} + } + + + + + + + 10.1371/journal.pcbi.1008214 + + @unpublished{galaxyTools, + author = {E. Mijalis, H. Rasche}, + title = {CPT Galaxy Tools}, + year = {2013-2017}, + note = {https://github.com/tamu-cpt/galaxy-tools/} + } + + + @unpublished{galaxyTools, + author = {A. Criscione}, + title = {CPT Galaxy Tools}, + year = {2019-2021}, + note = {https://github.com/tamu-cpt/galaxy-tools/} + } + + + + + + + 10.1371/journal.pcbi.1008214 + + @unpublished{galaxyTools, + author = {A. Criscione}, + title = {CPT Galaxy Tools}, + year = {2019-2021}, + note = {https://github.com/tamu-cpt/galaxy-tools/} + } + + + + + + + 10.1371/journal.pcbi.1008214 + + @unpublished{galaxyTools, + author = {C. Maughmer}, + title = {CPT Galaxy Tools}, + year = {2017-2020}, + note = {https://github.com/tamu-cpt/galaxy-tools/} + } + + + + + + + @unpublished{galaxyTools, + author = {C. Maughmer}, + title = {CPT Galaxy Tools}, + year = {2017-2020}, + note = {https://github.com/tamu-cpt/galaxy-tools/} + } + + + + diff -r 000000000000 -r 6a4d1bd8ac1d cpt_annotation_table/gff3.py --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cpt_annotation_table/gff3.py Fri Jun 17 12:19:58 2022 +0000 @@ -0,0 +1,346 @@ +import copy +import logging + +log = logging.getLogger() +log.setLevel(logging.WARN) + + +def feature_lambda( + feature_list, + test, + test_kwargs, + subfeatures=True, + parent=None, + invert=False, + recurse=True, +): + """Recursively search through features, testing each with a test function, yielding matches. + + GFF3 is a hierachical data structure, so we need to be able to recursively + search through features. E.g. if you're looking for a feature with + ID='bob.42', you can't just do a simple list comprehension with a test + case. You don't know how deeply burried bob.42 will be in the feature tree. This is where feature_lambda steps in. + + :type feature_list: list + :param feature_list: an iterable of features + + :type test: function reference + :param test: a closure with the method signature (feature, **kwargs) where + the kwargs are those passed in the next argument. This + function should return True or False, True if the feature is + to be yielded as part of the main feature_lambda function, or + False if it is to be ignored. This function CAN mutate the + features passed to it (think "apply"). + + :type test_kwargs: dictionary + :param test_kwargs: kwargs to pass to your closure when it is called. + + :type subfeatures: boolean + :param subfeatures: when a feature is matched, should just that feature be + yielded to the caller, or should the entire sub_feature + tree for that feature be included? subfeatures=True is + useful in cases such as searching for a gene feature, + and wanting to know what RBS/Shine_Dalgarno_sequences + are in the sub_feature tree (which can be accomplished + with two feature_lambda calls). subfeatures=False is + useful in cases when you want to process (and possibly + return) the entire feature tree, such as applying a + qualifier to every single feature. + + :type invert: boolean + :param invert: Negate/invert the result of the filter. + + :rtype: yielded list + :return: Yields a list of matching features. + """ + # Either the top level set of [features] or the subfeature attribute + for feature in feature_list: + feature._parent = parent + if not parent: + # Set to self so we cannot go above root. + feature._parent = feature + test_result = test(feature, **test_kwargs) + # if (not invert and test_result) or (invert and not test_result): + if invert ^ test_result: + if not subfeatures: + feature_copy = copy.deepcopy(feature) + feature_copy.sub_features = list() + yield feature_copy + else: + yield feature + + if recurse and hasattr(feature, "sub_features"): + for x in feature_lambda( + feature.sub_features, + test, + test_kwargs, + subfeatures=subfeatures, + parent=feature, + invert=invert, + recurse=recurse, + ): + yield x + + +def fetchParent(feature): + if not hasattr(feature, "_parent") or feature._parent is None: + return feature + else: + return fetchParent(feature._parent) + + +def feature_test_true(feature, **kwargs): + return True + + +def feature_test_type(feature, **kwargs): + if "type" in kwargs: + return str(feature.type).upper() == str(kwargs["type"]).upper() + elif "types" in kwargs: + for x in kwargs["types"]: + if str(feature.type).upper() == str(x).upper(): + return True + return False + raise Exception("Incorrect feature_test_type call, need type or types") + + +def feature_test_qual_value(feature, **kwargs): + """Test qualifier values. + + For every feature, check that at least one value in + feature.quailfiers(kwargs['qualifier']) is in kwargs['attribute_list'] + """ + if isinstance(kwargs["qualifier"], list): + for qualifier in kwargs["qualifier"]: + for attribute_value in feature.qualifiers.get(qualifier, []): + if attribute_value in kwargs["attribute_list"]: + return True + else: + for attribute_value in feature.qualifiers.get(kwargs["qualifier"], []): + if attribute_value in kwargs["attribute_list"]: + return True + return False + + +def feature_test_location(feature, **kwargs): + if "strand" in kwargs: + if feature.location.strand != kwargs["strand"]: + return False + + return feature.location.start <= kwargs["loc"] <= feature.location.end + + +def feature_test_quals(feature, **kwargs): + """ + Example:: + + a = Feature(qualifiers={'Note': ['Some notes', 'Aasdf']}) + + # Check if a contains a Note + feature_test_quals(a, {'Note': None}) # Returns True + feature_test_quals(a, {'Product': None}) # Returns False + + # Check if a contains a note with specific value + feature_test_quals(a, {'Note': ['ome']}) # Returns True + + # Check if a contains a note with specific value + feature_test_quals(a, {'Note': ['other']}) # Returns False + """ + for key in kwargs: + if key not in feature.qualifiers: + return False + + # Key is present, no value specified + if kwargs[key] is None: + return True + + # Otherwise there is a key value we're looking for. + # so we make a list of matches + matches = [] + # And check all of the feature qualifier valuse + for value in feature.qualifiers[key]: + # For that kwargs[key] value + for x in kwargs[key]: + matches.append(x in value) + + # If none matched, then we return false. + if not any(matches): + return False + + return True + + +def feature_test_contains(feature, **kwargs): + if "index" in kwargs: + return feature.location.start < kwargs["index"] < feature.location.end + elif "range" in kwargs: + return ( + feature.location.start < kwargs["range"]["start"] < feature.location.end + and feature.location.start < kwargs["range"]["end"] < feature.location.end + ) + else: + raise RuntimeError("Must use index or range keyword") + + +def get_id(feature=None, parent_prefix=None): + result = "" + if parent_prefix is not None: + result += parent_prefix + "|" + if "locus_tag" in feature.qualifiers: + result += feature.qualifiers["locus_tag"][0] + elif "gene" in feature.qualifiers: + result += feature.qualifiers["gene"][0] + elif "Gene" in feature.qualifiers: + result += feature.qualifiers["Gene"][0] + elif "product" in feature.qualifiers: + result += feature.qualifiers["product"][0] + elif "Product" in feature.qualifiers: + result += feature.qualifiers["Product"][0] + elif "Name" in feature.qualifiers: + result += feature.qualifiers["Name"][0] + else: + return feature.id + # Leaving in case bad things happen. + # result += '%s_%s_%s_%s' % ( + # feature.id, + # feature.location.start, + # feature.location.end, + # feature.location.strand + # ) + return result + + +def get_gff3_id(gene): + return gene.qualifiers.get("Name", [gene.id])[0] + + +def ensure_location_in_bounds(start=0, end=0, parent_length=0): + # This prevents frameshift errors + while start < 0: + start += 3 + while end < 0: + end += 3 + while start > parent_length: + start -= 3 + while end > parent_length: + end -= 3 + return (start, end) + + +def coding_genes(feature_list): + for x in genes(feature_list): + if ( + len( + list( + feature_lambda( + x.sub_features, + feature_test_type, + {"type": "CDS"}, + subfeatures=False, + ) + ) + ) + > 0 + ): + yield x + + +def genes(feature_list, feature_type="gene", sort=False): + """ + Simple filter to extract gene features from the feature set. + """ + + if not sort: + for x in feature_lambda( + feature_list, feature_test_type, {"type": feature_type}, subfeatures=True + ): + yield x + else: + data = list(genes(feature_list, feature_type=feature_type, sort=False)) + data = sorted(data, key=lambda feature: feature.location.start) + for x in data: + yield x + + +def wa_unified_product_name(feature): + """ + Try and figure out a name. We gave conflicting instructions, so + this isn't as trivial as it should be. Sometimes it will be in + 'product' or 'Product', othertimes in 'Name' + """ + # Manually applied tags. + protein_product = feature.qualifiers.get( + "product", feature.qualifiers.get("Product", [None]) + )[0] + + # If neither of those are available ... + if protein_product is None: + # And there's a name... + if "Name" in feature.qualifiers: + if not is_uuid(feature.qualifiers["Name"][0]): + protein_product = feature.qualifiers["Name"][0] + + return protein_product + + +def is_uuid(name): + return name.count("-") == 4 and len(name) == 36 + + +def get_rbs_from(gene): + # Normal RBS annotation types + rbs_rbs = list( + feature_lambda( + gene.sub_features, feature_test_type, {"type": "RBS"}, subfeatures=False + ) + ) + rbs_sds = list( + feature_lambda( + gene.sub_features, + feature_test_type, + {"type": "Shine_Dalgarno_sequence"}, + subfeatures=False, + ) + ) + # Fraking apollo + apollo_exons = list( + feature_lambda( + gene.sub_features, feature_test_type, {"type": "exon"}, subfeatures=False + ) + ) + apollo_exons = [x for x in apollo_exons if len(x) < 10] + # These are more NCBI's style + regulatory_elements = list( + feature_lambda( + gene.sub_features, + feature_test_type, + {"type": "regulatory"}, + subfeatures=False, + ) + ) + rbs_regulatory = list( + feature_lambda( + regulatory_elements, + feature_test_quals, + {"regulatory_class": ["ribosome_binding_site"]}, + subfeatures=False, + ) + ) + # Here's hoping you find just one ;) + return rbs_rbs + rbs_sds + rbs_regulatory + apollo_exons + + +def nice_name(record): + """ + get the real name rather than NCBI IDs and so on. If fails, will return record.id + """ + name = record.id + likely_parental_contig = list(genes(record.features, feature_type="contig")) + if len(likely_parental_contig) == 1: + name = likely_parental_contig[0].qualifiers.get("organism", [name])[0] + return name + + +def fsort(it): + for i in sorted(it, key=lambda x: int(x.location.start)): + yield i diff -r 000000000000 -r 6a4d1bd8ac1d cpt_annotation_table/macros.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cpt_annotation_table/macros.xml Fri Jun 17 12:19:58 2022 +0000 @@ -0,0 +1,23 @@ + + + + + python + biopython + cpt_gffparser + + + + + + + + + + + ln -s $genome_fasta genomeref.fa; + + + genomeref.fa + + diff -r 000000000000 -r 6a4d1bd8ac1d cpt_annotation_table/phage_annotation_table.py --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cpt_annotation_table/phage_annotation_table.py Fri Jun 17 12:19:58 2022 +0000 @@ -0,0 +1,608 @@ +#!/usr/bin/env python +# vim: set fileencoding=utf-8 +import os +import argparse +from gff3 import genes, get_gff3_id, get_rbs_from, feature_test_true, feature_lambda, feature_test_type +from CPT_GFFParser import gffParse, gffWrite +from Bio import SeqIO +from jinja2 import Environment, FileSystemLoader +import logging +from math import floor + +logging.basicConfig(level=logging.DEBUG) +log = logging.getLogger(name="pat") + +# Path to script, required because of Galaxy. +SCRIPT_PATH = os.path.dirname(os.path.realpath(__file__)) +# Path to the HTML template for the report + +def genes_all(feature_list, feature_type=["gene"], sort=False): + """ + Simple filter to extract gene features from the feature set. + """ + + if not sort: + for x in feature_lambda( + feature_list, feature_test_type, {"types": feature_type}, subfeatures=True + ): + yield x + else: + data = list(genes_all(feature_list, feature_type, sort=False)) + data = sorted(data, key=lambda feature: feature.location.start) + for x in data: + yield x + +def checkSubs(feature, qualName): + subFeats = [] + res = "" + subFeats = feature.sub_features + while (len(subFeats) > 0): + for feat in subFeats: + for i in feat.qualifiers.keys(): + for j in qualName: + if i == j: + if res == "": + res = feat.qualifiers[i][0] + else: + res += "; " + feat.qualifiers[i][0] + if res != "": + return res + tempFeats = [] + for feat in subFeats: # Should be breadth-first results + for x in feat.sub_features: + tempFeats.append(x) + subFeats = tempFeats + return res + +def annotation_table_report(record, types, wanted_cols, gaf_data, searchSubs): + getTypes = [] + for x in [y.strip() for y in types.split(",")]: + getTypes.append(x) + getTypes.append("gene") + sorted_features = list(genes_all(record.features, getTypes, sort=True)) + if wanted_cols is None or len(wanted_cols.strip()) == 0: + return [], [] + useSubs = searchSubs + + def rid(record, feature): + """Organism ID + """ + return record.id + + def id(record, feature): + """ID + """ + return feature.id + + def featureType(record, feature): + """Type + """ + return feature.type + + def name(record, feature): + """Name + """ + for x in ["Name", "name"]: + for y in feature.qualifiers.keys(): + if x == y: + return feature.qualifiers[x][0] + if useSubs: + res = checkSubs(feature, ["Name", "name"]) + if res != "": + return res + return "None" + def start(record, feature): + """Boundary + """ + return str(feature.location.start + 1) + + def end(record, feature): + """Boundary + """ + return str(feature.location.end) + + def location(record, feature): + """Location + """ + return str(feature.location.start + 1) + "..{0.end}".format(feature.location) + + def length(record, feature): + """CDS Length (AA) + """ + + if feature.type == "CDS": + cdss = [feature] + else: + cdss = list(genes(feature.sub_features, feature_type="CDS", sort=True)) + + if cdss == []: + return "None" + res = (sum([len(cds) for cds in cdss]) / 3) - 1 + if floor(res) == res: + res = int(res) + return str(res) + + def notes(record, feature): + """User entered Notes""" + for x in ["Note", "note", "Notes", "notes"]: + for y in feature.qualifiers.keys(): + if x == y: + return feature.qualifiers[x][0] + if useSubs: + res = checkSubs(feature, ["Note", "note", "Notes", "notes"]) + if res != "": + return res + return "None" + + def date_created(record, feature): + """Created""" + return feature.qualifiers.get("date_creation", ["None"])[0] + + def date_last_modified(record, feature): + """Last Modified""" + res = feature.qualifiers.get("date_last_modified", ["None"])[0] + if res != "None": + return res + if useSubs: + res = checkSubs(feature, ["date_last_modified"]) + if res != "": + return res + return "None" + + def description(record, feature): + """Description""" + res = feature.qualifiers.get("description", ["None"])[0] + if res != "None": + return res + if useSubs: + res = checkSubs(feature, ["description"]) + if res != "": + return res + return "None" + + def owner(record, feature): + """Owner + + User who created the feature. In a 464 scenario this may be one of + the TAs.""" + for x in ["Owner", "owner"]: + for y in feature.qualifiers.keys(): + if x == y: + return feature.qualifiers[x][0] + if useSubs: + res = checkSubs(feature, ["Owner", "owner"]) + if res != "": + return res + return "None" + + def product(record, feature): + """Product + + User entered product qualifier (collects "Product" and "product" + entries)""" + """User entered Notes""" + for x in ["product", "Product"]: + for y in feature.qualifiers.keys(): + if x == y: + return feature.qualifiers[x][0] + if useSubs: + res = checkSubs(feature, ["product", "Product"]) + if res != "": + return res + return "None" + + def note(record, feature): + """Note + + User entered Note qualifier(s)""" + return feature.qualifiers.get("Note", []) + + def strand(record, feature): + """Strand + """ + return "+" if feature.location.strand > 0 else "-" + + def sd_spacing(record, feature): + """Shine-Dalgarno spacing + """ + rbss = get_rbs_from(gene) + if len(rbss) == 0: + return "None" + else: + resp = [] + for rbs in rbss: + cdss = list(genes(feature.sub_features, feature_type="CDS", sort=True)) + if len(cdss) == 0: + return "No CDS" + if rbs.location.strand > 0: + distance = min( + cdss, key=lambda x: x.location.start - rbs.location.end + ) + distance_val = str(distance.location.start - rbs.location.end) + resp.append(distance_val) + else: + distance = min( + cdss, key=lambda x: x.location.end - rbs.location.start + ) + distance_val = str(rbs.location.start - distance.location.end) + resp.append(distance_val) + + if len(resp) == 1: + return str(resp[0]) + return resp + + def sd_seq(record, feature): + """Shine-Dalgarno sequence + """ + rbss = get_rbs_from(gene) + if len(rbss) == 0: + return "None" + else: + resp = [] + for rbs in rbss: + resp.append(str(rbs.extract(record).seq)) + if len(resp) == 1: + return str(resp[0]) + else: + return resp + + def start_codon(record, feature): + """Start Codon + """ + if feature.type == "CDS": + cdss = [feature] + else: + cdss = list(genes(feature.sub_features, feature_type="CDS", sort=True)) + + data = [x for x in cdss] + if len(data) == 1: + return str(data[0].extract(record).seq[0:3]) + else: + return [ + "{0} ({1.location.start}..{1.location.end}:{1.location.strand})".format( + x.extract(record).seq[0:3], x + ) + for x in data + ] + + def stop_codon(record, feature): + """Stop Codon + """ + return str(feature.extract(record).seq[-3:]) + + def dbxrefs(record, feature): + """DBxrefs + """ + """User entered Notes""" + for x in ["Dbxref", "db_xref", "DB_xref", "DBxref", "DB_Xref", "DBXref"]: + for y in feature.qualifiers.keys(): + if x == y: + return feature.qualifiers[x][0] + return "None" + + def upstream_feature(record, feature): + """Next gene upstream""" + if feature.strand > 0: + upstream_features = [ + x for x in sorted_features if (x.location.start < feature.location.start and x.type == "gene" and x.strand == feature.strand) + ] + if len(upstream_features) > 0: + foundSelf = False + featCheck = upstream_features[-1].sub_features + for x in featCheck: + if x == feature: + foundSelf = True + break + featCheck = featCheck + x.sub_features + if foundSelf: + if len(upstream_features) > 1: + return upstream_features[-2] + return None + return upstream_features[-1] + else: + return None + else: + upstream_features = [ + x for x in sorted_features if (x.location.end > feature.location.end and x.type == "gene" and x.strand == feature.strand) + ] + + if len(upstream_features) > 0: + foundSelf = False + featCheck = upstream_features[0].sub_features + for x in featCheck: + if x == feature: + foundSelf = True + break + featCheck = featCheck + x.sub_features + if foundSelf: + if len(upstream_features) > 1: + return upstream_features[1] + return None + return upstream_features[0] + else: + return None + + def upstream_feature__name(record, feature): + """Next gene upstream""" + up = upstream_feature(record, feature) + if up: + return str(up.id) + return "None" + + def ig_dist(record, feature): + """Distance to next upstream gene on same strand""" + up = upstream_feature(record, feature) + if up: + dist = None + if feature.strand > 0: + dist = feature.location.start - up.location.end + else: + dist = up.location.start - feature.location.end + return str(dist) + else: + return "None" + + def _main_gaf_func(record, feature, gaf_data, attr): + if feature.id in gaf_data: + return [x[attr] for x in gaf_data[feature.id]] + return [] + + def gaf_annotation_extension(record, feature, gaf_data): + """GAF Annotation Extension + + Contains cross references to other ontologies that can be used + to qualify or enhance the annotation. The cross-reference is + prefaced by an appropriate GO relationship; references to + multiple ontologies can be entered. For example, if a gene + product is localized to the mitochondria of lymphocytes, the GO + ID (column 5) would be mitochondrion ; GO:0005439, and the + annotation extension column would contain a cross-reference to + the term lymphocyte from the Cell Type Ontology. + """ + return _main_gaf_func(record, feature, gaf_data, "annotation_extension") + + def gaf_aspect(record, feature, gaf_data): + """GAF Aspect code + + E.g. P (biological process), F (molecular function) or C (cellular component) + """ + return _main_gaf_func(record, feature, gaf_data, "aspect") + + def gaf_assigned_by(record, feature, gaf_data): + """GAF Creating Organisation + """ + return _main_gaf_func(record, feature, gaf_data, "assigned_by") + + def gaf_date(record, feature, gaf_data): + """GAF Creation Date + """ + return _main_gaf_func(record, feature, gaf_data, "date") + + def gaf_db(record, feature, gaf_data): + """GAF DB + """ + return _main_gaf_func(record, feature, gaf_data, "db") + + def gaf_db_reference(record, feature, gaf_data): + """GAF DB Reference + """ + return _main_gaf_func(record, feature, gaf_data, "db_reference") + + def gaf_evidence_code(record, feature, gaf_data): + """GAF Evidence Code + """ + return _main_gaf_func(record, feature, gaf_data, "evidence_code") + + def gaf_go_id(record, feature, gaf_data): + """GAF GO ID + """ + return _main_gaf_func(record, feature, gaf_data, "go_id") + + def gaf_go_term(record, feature, gaf_data): + """GAF GO Term + """ + return _main_gaf_func(record, feature, gaf_data, "go_term") + + def gaf_id(record, feature, gaf_data): + """GAF ID + """ + return _main_gaf_func(record, feature, gaf_data, "id") + + def gaf_notes(record, feature, gaf_data): + """GAF Notes + """ + return _main_gaf_func(record, feature, gaf_data, "notes") + + def gaf_owner(record, feature, gaf_data): + """GAF Creator + """ + return _main_gaf_func(record, feature, gaf_data, "owner") + + def gaf_with_or_from(record, feature, gaf_data): + """GAF With/From + """ + return _main_gaf_func(record, feature, gaf_data, "with_or_from") + + cols = [] + data = [] + funcs = [] + lcl = locals() + for x in [y.strip().lower() for y in wanted_cols.split(",")]: + if not x: + continue + if x == "type": + x = "featureType" + if x in lcl: + funcs.append(lcl[x]) + # Keep track of docs + func_doc = lcl[x].__doc__.strip().split("\n\n") + # If there's a double newline, assume following text is the + # "help" and the first part is the "name". Generate empty help + # if not provided + if len(func_doc) == 1: + func_doc += [""] + cols.append(func_doc) + elif "__" in x: + chosen_funcs = [lcl[y] for y in x.split("__")] + func_doc = [ + " of ".join( + [y.__doc__.strip().split("\n\n")[0] for y in chosen_funcs[::-1]] + ) + ] + cols.append(func_doc) + funcs.append(chosen_funcs) + + for gene in genes_all(record.features, getTypes, sort=True): + row = [] + for func in funcs: + if isinstance(func, list): + # If we have a list of functions, repeatedly apply them + value = gene + for f in func: + if value is None: + value = "None" + break + + value = f(record, value) + else: + # Otherwise just apply the lone function + if func.__name__.startswith("gaf_"): + value = func(record, gene, gaf_data) + else: + value = func(record, gene) + + if isinstance(value, list): + collapsed_value = ", ".join(value) + value = [str(collapsed_value)]#.encode("unicode_escape")] + else: + value = str(value)#.encode("unicode_escape") + + row.append(value) + # print row + data.append(row) + return data, cols + + +def parseGafData(file): + cols = [] + data = {} + # '10d04a01-5ed8-49c8-b724-d6aa4df5a98d': { + # 'annotation_extension': '', + # 'aspect': '', + # 'assigned_by': 'CPT', + # 'date': '2017-05-04T16:25:22.161916Z', + # 'db': 'UniProtKB', + # 'db_reference': 'GO_REF:0000100', + # 'evidence_code': 'ISA', + # 'gene': '0d307196-833d-46e8-90e9-d80f7a041d88', + # 'go_id': 'GO:0039660', + # 'go_term': 'structural constituent of virion', + # 'id': '10d04a01-5ed8-49c8-b724-d6aa4df5a98d', + # 'notes': 'hit was putative minor structural protein', + # 'owner': 'amarc1@tamu.edu', + # 'with_or_from': 'UNIREF90:B2ZYZ7' + # }, + for row in file: + if row.startswith("#"): + # Header + cols = ( + row.strip().replace("# ", "").replace("GO Term", "go_term").split("\t") + ) + else: + line = row.strip().split("\t") + tmp = dict(zip(cols, line)) + if "gene" not in tmp.keys(): + continue + if tmp["gene"] not in data: + data[tmp["gene"]] = [] + + data[tmp["gene"]].append(tmp) + return data + + +def evaluate_and_report( + annotations, + genome, + types="gene", + reportTemplateName="phage_annotation_validator.html", + annotationTableCols="", + gafData=None, + searchSubs = False, +): + """ + Generate our HTML evaluation of the genome + """ + # Get features from GFF file + seq_dict = SeqIO.to_dict(SeqIO.parse(genome, "fasta")) + # Get the first GFF3 record + # TODO: support multiple GFF3 files. + at_table_data = [] + gaf = {} + if gafData: + gaf = parseGafData(gafData) + + for record in gffParse(annotations, base_dict=seq_dict): + if reportTemplateName.endswith(".html"): + record.id = record.id.replace(".", "-") + log.info("Producing an annotation table for %s" % record.id) + annotation_table_data, annotation_table_col_names = annotation_table_report( + record, types, annotationTableCols, gaf, searchSubs + ) + at_table_data.append((record, annotation_table_data)) + # break + + # This is data that will go into our HTML template + kwargs = { + "annotation_table_data": at_table_data, + "annotation_table_col_names": annotation_table_col_names, + } + + env = Environment( + loader=FileSystemLoader(SCRIPT_PATH), trim_blocks=True, lstrip_blocks=True + ) + if reportTemplateName.endswith(".html"): + env.filters["nice_id"] = str(get_gff3_id).replace(".", "-") + else: + env.filters["nice_id"] = get_gff3_id + + def join(listy): + return "\n".join(listy) + + env.filters.update({"join": join}) + tpl = env.get_template(reportTemplateName) + return tpl.render(**kwargs).encode("utf-8") + + +if __name__ == "__main__": + parser = argparse.ArgumentParser( + description="rebase gff3 features against parent locations", epilog="" + ) + parser.add_argument( + "annotations", type=argparse.FileType("r"), help="Parent GFF3 annotations" + ) + parser.add_argument("genome", type=argparse.FileType("r"), help="Genome Sequence") + + parser.add_argument( + "--types", + help="Select extra types to display in output (Will always include gene)", + ) + + parser.add_argument( + "--reportTemplateName", + help="Report template file name", + default="phageqc_report_full.html", + ) + parser.add_argument( + "--annotationTableCols", + help="Select columns to report in the annotation table output format", + ) + parser.add_argument( + "--gafData", help="CPT GAF-like table", type=argparse.FileType("r") + ) + parser.add_argument( + "--searchSubs", help="Attempt to populate fields from sub-features if qualifier is empty", action="store_true" + ) + + args = parser.parse_args() + + print(evaluate_and_report(**vars(args)).decode("utf-8")) diff -r 000000000000 -r 6a4d1bd8ac1d cpt_annotation_table/phage_annotation_table.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cpt_annotation_table/phage_annotation_table.xml Fri Jun 17 12:19:58 2022 +0000 @@ -0,0 +1,112 @@ + + + from gff3 formatted datasets + + macros.xml + cpt-macros.xml + + + jinja2 + + $output]]> + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff -r 000000000000 -r 6a4d1bd8ac1d cpt_annotation_table/phageqc_report_annotation_table.html --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cpt_annotation_table/phageqc_report_annotation_table.html Fri Jun 17 12:19:58 2022 +0000 @@ -0,0 +1,244 @@ + + + + + + + + + + Annotation Table + + + + + + + + + + + + + + + +
+
+
+ + + +
+
+ Data on each organism will be accessible from the tabs above. +
+ {% for (record, data) in annotation_table_data %} +
+ + + + {% for col in annotation_table_col_names %} + + {% endfor %} + + + + {% for row in data %} + + {% for col in row %} + + {% endfor %} + + {% endfor %} + +
{{ col[0] }}
{% if col is not string %}
    {% for val in col %}
  • {{ val }}
    • {% endfor %}
{% else %}{{ col }}{% endif %}
+
+ {% endfor %} +
+
+
+
+ + + + diff -r 000000000000 -r 6a4d1bd8ac1d cpt_annotation_table/phageqc_report_annotation_table.tsv --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cpt_annotation_table/phageqc_report_annotation_table.tsv Fri Jun 17 12:19:58 2022 +0000 @@ -0,0 +1,8 @@ +{% for (record, dataset) in annotation_table_data %} +# {% for col in annotation_table_col_names %}{{ col[0] }} {% endfor %} +{% for row in dataset %} + +{% for col in row %} +{% if col is not string %}"{{ col | join }}"{% else %}{{ col }}{% endif %} {% endfor %} +{% endfor %} +{% endfor %} diff -r 000000000000 -r 6a4d1bd8ac1d cpt_annotation_table/test-data/NC_001416_Table_In.fasta --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cpt_annotation_table/test-data/NC_001416_Table_In.fasta Fri Jun 17 12:19:58 2022 +0000 @@ -0,0 +1,810 @@ +>NC_001416.1_phage_lambda +GGGCGGCGACCTCGCGGGTTTTCGCTATTTATGAAAATTTTCCGGTTTAAGGCGTTTCCG +TTCTTCTTCGTCATAACTTAATGTTTTTATTTAAAATACCCTCTGAAAAGAAAGGAAACG +ACAGGTGCTGAAAGCGAGGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGT +GGAATGAACAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCG +TACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAA +TGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAAT +TGAGAACGAAAAGCTGCGCCGGGAGGTTGAAGAACTGCGGCAGGCCAGCGAGGCAGATCT +CCAGCCAGGAACTATTGAGTACGAACGCCATCGACTTACGCGTGCGCAGGCCGACGCACA +GGAACTGAAGAATGCCAGAGACTCCGCTGAAGTGGTGGAAACCGCATTCTGTACTTTCGT +GCTGTCGCGGATCGCAGGTGAAATTGCCAGTATTCTCGACGGGCTCCCCCTGTCGGTGCA +GCGGCGTTTTCCGGAACTGGAAAACCGACATGTTGATTTCCTGAAACGGGATATCATCAA +AGCCATGAACAAAGCAGCCGCGCTGGATGAACTGATACCGGGGTTGCTGAGTGAATATAT +CGAACAGTCAGGTTAACAGGCTGCGGCATTTTGTCCGCGCCGGGCTTCGCTCACTGTTCA +GGCCGGAGCCACAGACCGCCGTTGAATGGGCGGATGCTAATTACTATCTCCCGAAAGAAT +CCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGA +TGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCA +AAATGCTGCTGGGTGTTTATGCCTACTTTATAGAGCATAAGCAGCGCAACACCCTTATCT +GGTTGCCGACGGATGGTGATGCCGAGAACTTTATGAAAACCCACGTTGAGCCGACTATTC +GTGATATTCCGTCGCTGCTGGCGCTGGCCCCGTGGTATGGCAAAAAGCACCGGGATAACA +CGCTCACCATGAAGCGTTTCACTAATGGGCGTGGCTTCTGGTGCCTGGGCGGTAAAGCGG +CAAAAAACTACCGTGAAAAGTCGGTGGATGTGGCGGGTTATGATGAACTTGCTGCTTTTG +ATGATGATATTGAACAGGAAGGCTCTCCGACGTTCCTGGGTGACAAGCGTATTGAAGGCT +CGGTCTGGCCAAAGTCCATCCGTGGCTCCACGCCAAAAGTGAGAGGCACCTGTCAGATTG +AGCGTGCAGCCAGTGAATCCCCGCATTTTATGCGTTTTCATGTTGCCTGCCCGCATTGCG +GGGAGGAGCAGTATCTTAAATTTGGCGACAAAGAGACGCCGTTTGGCCTCAAATGGACGC +CGGATGACCCCTCCAGCGTGTTTTATCTCTGCGAGCATAATGCCTGCGTCATCCGCCAGC +AGGAGCTGGACTTTACTGATGCCCGTTATATCTGCGAAAAGACCGGGATCTGGACCCGTG +ATGGCATTCTCTGGTTTTCGTCATCCGGTGAAGAGATTGAGCCACCTGACAGTGTGACCT +TTCACATCTGGACAGCGTACAGCCCGTTCACCACCTGGGTGCAGATTGTCAAAGACTGGA +TGAAAACGAAAGGGGATACGGGAAAACGTAAAACCTTCGTAAACACCACGCTCGGTGAGA +CGTGGGAGGCGAAAATTGGCGAACGTCCGGATGCTGAAGTGATGGCAGAGCGGAAAGAGC +ATTATTCAGCGCCCGTTCCTGACCGTGTGGCTTACCTGACCGCCGGTATCGACTCCCAGC +TGGACCGCTACGAAATGCGCGTATGGGGATGGGGGCCGGGTGAGGAAAGCTGGCTGATTG +ACCGGCAGATTATTATGGGCCGCCACGACGATGAACAGACGCTGCTGCGTGTGGATGAGG +CCATCAATAAAACCTATACCCGCCGGAATGGTGCAGAAATGTCGATATCCCGTATCTGCT +GGGATACTGGCGGGATTGACCCGACCATTGTGTATGAACGCTCGAAAAAACATGGGCTGT +TCCGGGTGATCCCCATTAAAGGGGCATCCGTCTACGGAAAGCCGGTGGCCAGCATGCCAC +GTAAGCGAAACAAAAACGGGGTTTACCTTACCGAAATCGGTACGGATACCGCGAAAGAGC +AGATTTATAACCGCTTCACACTGACGCCGGAAGGGGATGAACCGCTTCCCGGTGCCGTTC +ACTTCCCGAATAACCCGGATATTTTTGATCTGACCGAAGCGCAGCAGCTGACTGCTGAAG +AGCAGGTCGAAAAATGGGTGGATGGCAGGAAAAAAATACTGTGGGACAGCAAAAAGCGAC +GCAATGAGGCACTCGACTGCTTCGTTTATGCGCTGGCGGCGCTGCGCATCAGTATTTCCC +GCTGGCAGCTGGATCTCAGTGCGCTGCTGGCGAGCCTGCAGGAAGAGGATGGTGCAGCAA +CCAACAAGAAAACACTGGCAGATTACGCCCGTGCCTTATCCGGAGAGGATGAATGACGCG +ACAGGAAGAACTTGCCGCTGCCCGTGCGGCACTGCATGACCTGATGACAGGTAAACGGGT +GGCAACAGTACAGAAAGACGGACGAAGGGTGGAGTTTACGGCCACTTCCGTGTCTGACCT +GAAAAAATATATTGCAGAGCTGGAAGTGCAGACCGGCATGACACAGCGACGCAGGGGACC +TGCAGGATTTTATGTATGAAAACGCCCACCATTCCCACCCTTCTGGGGCCGGACGGCATG +ACATCGCTGCGCGAATATGCCGGTTATCACGGCGGTGGCAGCGGATTTGGAGGGCAGTTG +CGGTCGTGGAACCCACCGAGTGAAAGTGTGGATGCAGCCCTGTTGCCCAACTTTACCCGT +GGCAATGCCCGCGCAGACGATCTGGTACGCAATAACGGCTATGCCGCCAACGCCATCCAG +CTGCATCAGGATCATATCGTCGGGTCTTTTTTCCGGCTCAGTCATCGCCCAAGCTGGCGC +TATCTGGGCATCGGGGAGGAAGAAGCCCGTGCCTTTTCCCGCGAGGTTGAAGCGGCATGG +AAAGAGTTTGCCGAGGATGACTGCTGCTGCATTGACGTTGAGCGAAAACGCACGTTTACC +ATGATGATTCGGGAAGGTGTGGCCATGCACGCCTTTAACGGTGAACTGTTCGTTCAGGCC +ACCTGGGATACCAGTTCGTCGCGGCTTTTCCGGACACAGTTCCGGATGGTCAGCCCGAAG +CGCATCAGCAACCCGAACAATACCGGCGACAGCCGGAACTGCCGTGCCGGTGTGCAGATT +AATGACAGCGGTGCGGCGCTGGGATATTACGTCAGCGAGGACGGGTATCCTGGCTGGATG +CCGCAGAAATGGACATGGATACCCCGTGAGTTACCCGGCGGGCGCGCCTCGTTCATTCAC +GTTTTTGAACCCGTGGAGGACGGGCAGACTCGCGGTGCAAATGTGTTTTACAGCGTGATG +GAGCAGATGAAGATGCTCGACACGCTGCAGAACACGCAGCTGCAGAGCGCCATTGTGAAG +GCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAGTCAGCGATGGATTTTATT +CTGGGCGCGAACAGTCAGGAGCAGCGGGAAAGGCTGACCGGCTGGATTGGTGAAATTGCC +GCGTATTACGCCGCAGCGCCGGTCCGGCTGGGAGGCGCAAAAGTACCGCACCTGATGCCG +GGTGACTCACTGAACCTGCAGACGGCTCAGGATACGGATAACGGCTACTCCGTGTTTGAG +CAGTCACTGCTGCGGTATATCGCTGCCGGGCTGGGTGTCTCGTATGAGCAGCTTTCCCGG +AATTACGCCCAGATGAGCTACTCCACGGCACGGGCCAGTGCGAACGAGTCGTGGGCGTAC +TTTATGGGGCGGCGAAAATTCGTCGCATCCCGTCAGGCGAGCCAGATGTTTCTGTGCTGG +CTGGAAGAGGCCATCGTTCGCCGCGTGGTGACGTTACCTTCAAAAGCGCGCTTCAGTTTT +CAGGAAGCCCGCAGTGCCTGGGGGAACTGCGACTGGATAGGCTCCGGTCGTATGGCCATC +GATGGTCTGAAAGAAGTTCAGGAAGCGGTGATGCTGATAGAAGCCGGACTGAGTACCTAC +GAGAAAGAGTGCGCAAAACGCGGTGACGACTATCAGGAAATTTTTGCCCAGCAGGTCCGT +GAAACGATGGAGCGCCGTGCAGCCGGTCTTAAACCGCCCGCCTGGGCGGCTGCAGCATTT +GAATCCGGGCTGCGACAATCAACAGAGGAGGAGAAGAGTGACAGCAGAGCTGCGTAATCT +CCCGCATATTGCCAGCATGGCCTTTAATGAGCCGCTGATGCTTGAACCCGCCTATGCGCG +GGTTTTCTTTTGTGCGCTTGCAGGCCAGCTTGGGATCAGCAGCCTGACGGATGCGGTGTC +CGGCGACAGCCTGACTGCCCAGGAGGCACTCGCGACGCTGGCATTATCCGGTGATGATGA +CGGACCACGACAGGCCCGCAGTTATCAGGTCATGAACGGCATCGCCGTGCTGCCGGTGTC +CGGCACGCTGGTCAGCCGGACGCGGGCGCTGCAGCCGTACTCGGGGATGACCGGTTACAA +CGGCATTATCGCCCGTCTGCAACAGGCTGCCAGCGATCCGATGGTGGACGGCATTCTGCT +CGATATGGACACGCCCGGCGGGATGGTGGCGGGGGCATTTGACTGCGCTGACATCATCGC +CCGTGTGCGTGACATAAAACCGGTATGGGCGCTTGCCAACGACATGAACTGCAGTGCAGG +TCAGTTGCTTGCCAGTGCCGCCTCCCGGCGTCTGGTCACGCAGACCGCCCGGACAGGCTC +CATCGGCGTCATGATGGCTCACAGTAATTACGGTGCTGCGCTGGAGAAACAGGGTGTGGA +AATCACGCTGATTTACAGCGGCAGCCATAAGGTGGATGGCAACCCCTACAGCCATCTTCC +GGATGACGTCCGGGAGACACTGCAGTCCCGGATGGACGCAACCCGCCAGATGTTTGCGCA +GAAGGTGTCGGCATATACCGGCCTGTCCGTGCAGGTTGTGCTGGATACCGAGGCTGCAGT +GTACAGCGGTCAGGAGGCCATTGATGCCGGACTGGCTGATGAACTTGTTAACAGCACCGA +TGCGATCACCGTCATGCGTGATGCACTGGATGCACGTAAATCCCGTCTCTCAGGAGGGCG +AATGACCAAAGAGACTCAATCAACAACTGTTTCAGCCACTGCTTCGCAGGCTGACGTTAC +TGACGTGGTGCCAGCGACGGAGGGCGAGAACGCCAGCGCGGCGCAGCCGGACGTGAACGC +GCAGATCACCGCAGCGGTTGCGGCAGAAAACAGCCGCATTATGGGGATCCTCAACTGTGA +GGAGGCTCACGGACGCGAAGAACAGGCACGCGTGCTGGCAGAAACCCCCGGTATGACCGT +GAAAACGGCCCGCCGCATTCTGGCCGCAGCACCACAGAGTGCACAGGCGCGCAGTGACAC +TGCGCTGGATCGTCTGATGCAGGGGGCACCGGCACCGCTGGCTGCAGGTAACCCGGCATC +TGATGCCGTTAACGATTTGCTGAACACACCAGTGTAAGGGATGTTTATGACGAGCAAAGA +AACCTTTACCCATTACCAGCCGCAGGGCAACAGTGACCCGGCTCATACCGCAACCGCGCC +CGGCGGATTGAGTGCGAAAGCGCCTGCAATGACCCCGCTGATGCTGGACACCTCCAGCCG +TAAGCTGGTTGCGTGGGATGGCACCACCGACGGTGCTGCCGTTGGCATTCTTGCGGTTGC +TGCTGACCAGACCAGCACCACGCTGACGTTCTACAAGTCCGGCACGTTCCGTTATGAGGA +TGTGCTCTGGCCGGAGGCTGCCAGCGACGAGACGAAAAAACGGACCGCGTTTGCCGGAAC +GGCAATCAGCATCGTTTAACTTTACCCTTCATCACTAAAGGCCGCCTGTGCGGCTTTTTT +TACGGGATTTTTTTATGTCGATGTACACAACCGCCCAACTGCTGGCGGCAAATGAGCAGA +AATTTAAGTTTGATCCGCTGTTTCTGCGTCTCTTTTTCCGTGAGAGCTATCCCTTCACCA +CGGAGAAAGTCTATCTCTCACAAATTCCGGGACTGGTAAACATGGCGCTGTACGTTTCGC +CGATTGTTTCCGGTGAGGTTATCCGTTCCCGTGGCGGCTCCACCTCTGAATTTACGCCGG +GATATGTCAAGCCGAAGCATGAAGTGAATCCGCAGATGACCCTGCGTCGCCTGCCGGATG +AAGATCCGCAGAATCTGGCGGACCCGGCTTACCGCCGCCGTCGCATCATCATGCAGAACA +TGCGTGACGAAGAGCTGGCCATTGCTCAGGTCGAAGAGATGCAGGCAGTTTCTGCCGTGC +TTAAGGGCAAATACACCATGACCGGTGAAGCCTTCGATCCGGTTGAGGTGGATATGGGCC +GCAGTGAGGAGAATAACATCACGCAGTCCGGCGGCACGGAGTGGAGCAAGCGTGACAAGT +CCACGTATGACCCGACCGACGATATCGAAGCCTACGCGCTGAACGCCAGCGGTGTGGTGA +ATATCATCGTGTTCGATCCGAAAGGCTGGGCGCTGTTCCGTTCCTTCAAAGCCGTCAAGG +AGAAGCTGGATACCCGTCGTGGCTCTAATTCCGAGCTGGAGACAGCGGTGAAAGACCTGG +GCAAAGCGGTGTCCTATAAGGGGATGTATGGCGATGTGGCCATCGTCGTGTATTCCGGAC +AGTACGTGGAAAACGGCGTCAAAAAGAACTTCCTGCCGGACAACACGATGGTGCTGGGGA +ACACTCAGGCACGCGGTCTGCGCACCTATGGCTGCATTCAGGATGCGGACGCACAGCGCG +AAGGCATTAACGCCTCTGCCCGTTACCCGAAAAACTGGGTGACCACCGGCGATCCGGCGC +GTGAGTTCACCATGATTCAGTCAGCACCGCTGATGCTGCTGGCTGACCCTGATGAGTTCG +TGTCCGTACAACTGGCGTAATCATGGCCCTTCGGGGCCATTGTTTCTCTGTGGAGGAGTC +CATGACGAAAGATGAACTGATTGCCCGTCTCCGCTCGCTGGGTGAACAACTGAACCGTGA +TGTCAGCCTGACGGGGACGAAAGAAGAACTGGCGCTCCGTGTGGCAGAGCTGAAAGAGGA +GCTTGATGACACGGATGAAACTGCCGGTCAGGACACCCCTCTCAGCCGGGAAAATGTGCT +GACCGGACATGAAAATGAGGTGGGATCAGCGCAGCCGGATACCGTGATTCTGGATACGTC +TGAACTGGTCACGGTCGTGGCACTGGTGAAGCTGCATACTGATGCACTTCACGCCACGCG +GGATGAACCTGTGGCATTTGTGCTGCCGGGAACGGCGTTTCGTGTCTCTGCCGGTGTGGC +AGCCGAAATGACAGAGCGCGGCCTGGCCAGAATGCAATAACGGGAGGCGCTGTGGCTGAT +TTCGATAACCTGTTCGATGCTGCCATTGCCCGCGCCGATGAAACGATACGCGGGTACATG +GGAACGTCAGCCACCATTACATCCGGTGAGCAGTCAGGTGCGGTGATACGTGGTGTTTTT +GATGACCCTGAAAATATCAGCTATGCCGGACAGGGCGTGCGCGTTGAAGGCTCCAGCCCG +TCCCTGTTTGTCCGGACTGATGAGGTGCGGCAGCTGCGGCGTGGAGACACGCTGACCATC +GGTGAGGAAAATTTCTGGGTAGATCGGGTTTCGCCGGATGATGGCGGAAGTTGTCATCTC +TGGCTTGGACGGGGCGTACCGCCTGCCGTTAACCGTCGCCGCTGAAAGGGGGATGTATGG +CCATAAAAGGTCTTGAGCAGGCCGTTGAAAACCTCAGCCGTATCAGCAAAACGGCGGTGC +CTGGTGCCGCCGCAATGGCCATTAACCGCGTTGCTTCATCCGCGATATCGCAGTCGGCGT +CACAGGTTGCCCGTGAGACAAAGGTACGCCGGAAACTGGTAAAGGAAAGGGCCAGGCTGA +AAAGGGCCACGGTCAAAAATCCGCAGGCCAGAATCAAAGTTAACCGGGGGGATTTGCCCG +TAATCAAGCTGGGTAATGCGCGGGTTGTCCTTTCGCGCCGCAGGCGTCGTAAAAAGGGGC +AGCGTTCATCCCTGAAAGGTGGCGGCAGCGTGCTTGTGGTGGGTAACCGTCGTATTCCCG +GCGCGTTTATTCAGCAACTGAAAAATGGCCGGTGGCATGTCATGCAGCGTGTGGCTGGGA +AAAACCGTTACCCCATTGATGTGGTGAAAATCCCGATGGCGGTGCCGCTGACCACGGCGT +TTAAACAAAATATTGAGCGGATACGGCGTGAACGTCTTCCGAAAGAGCTGGGCTATGCGC +TGCAGCATCAACTGAGGATGGTAATAAAGCGATGAAACATACTGAACTCCGTGCAGCCGT +ACTGGATGCACTGGAGAAGCATGACACCGGGGCGACGTTTTTTGATGGTCGCCCCGCTGT +TTTTGATGAGGCGGATTTTCCGGCAGTTGCCGTTTATCTCACCGGCGCTGAATACACGGG +CGAAGAGCTGGACAGCGATACCTGGCAGGCGGAGCTGCATATCGAAGTTTTCCTGCCTGC +TCAGGTGCCGGATTCAGAGCTGGATGCGTGGATGGAGTCCCGGATTTATCCGGTGATGAG +CGATATCCCGGCACTGTCAGATTTGATCACCAGTATGGTGGCCAGCGGCTATGACTACCG +GCGCGACGATGATGCGGGCTTGTGGAGTTCAGCCGATCTGACTTATGTCATTACCTATGA +AATGTGAGGACGCTATGCCTGTACCAAATCCTACAATGCCGGTGAAAGGTGCCGGGACCA +CCCTGTGGGTTTATAAGGGGAGCGGTGACCCTTACGCGAATCCGCTTTCAGACGTTGACT +GGTCGCGTCTGGCAAAAGTTAAAGACCTGACGCCCGGCGAACTGACCGCTGAGTCCTATG +ACGACAGCTATCTCGATGATGAAGATGCAGACTGGACTGCGACCGGGCAGGGGCAGAAAT +CTGCCGGAGATACCAGCTTCACGCTGGCGTGGATGCCCGGAGAGCAGGGGCAGCAGGCGC +TGCTGGCGTGGTTTAATGAAGGCGATACCCGTGCCTATAAAATCCGCTTCCCGAACGGCA +CGGTCGATGTGTTCCGTGGCTGGGTCAGCAGTATCGGTAAGGCGGTGACGGCGAAGGAAG +TGATCACCCGCACGGTGAAAGTCACCAATGTGGGACGTCCGTCGATGGCAGAAGATCGCA +GCACGGTAACAGCGGCAACCGGCATGACCGTGACGCCTGCCAGCACCTCGGTGGTGAAAG +GGCAGAGCACCACGCTGACCGTGGCCTTCCAGCCGGAGGGCGTAACCGACAAGAGCTTTC +GTGCGGTGTCTGCGGATAAAACAAAAGCCACCGTGTCGGTCAGTGGTATGACCATCACCG +TGAACGGCGTTGCTGCAGGCAAGGTCAACATTCCGGTTGTATCCGGTAATGGTGAGTTTG +CTGCGGTTGCAGAAATTACCGTCACCGCCAGTTAATCCGGAGAGTCAGCGATGTTCCTGA +AAACCGAATCATTTGAACATAACGGTGTGACCGTCACGCTTTCTGAACTGTCAGCCCTGC +AGCGCATTGAGCATCTCGCCCTGATGAAACGGCAGGCAGAACAGGCGGAGTCAGACAGCA +ACCGGAAGTTTACTGTGGAAGACGCCATCAGAACCGGCGCGTTTCTGGTGGCGATGTCCC +TGTGGCATAACCATCCGCAGAAGACGCAGATGCCGTCCATGAATGAAGCCGTTAAACAGA +TTGAGCAGGAAGTGCTTACCACCTGGCCCACGGAGGCAATTTCTCATGCTGAAAACGTGG +TGTACCGGCTGTCTGGTATGTATGAGTTTGTGGTGAATAATGCCCCTGAACAGACAGAGG +ACGCCGGGCCCGCAGAGCCTGTTTCTGCGGGAAAGTGTTCGACGGTGAGCTGAGTTTTGC +CCTGAAACTGGCGCGTGAGATGGGGCGACCCGACTGGCGTGCCATGCTTGCCGGGATGTC +ATCCACGGAGTATGCCGACTGGCACCGCTTTTACAGTACCCATTATTTTCATGATGTTCT +GCTGGATATGCACTTTTCCGGGCTGACGTACACCGTGCTCAGCCTGTTTTTCAGCGATCC +GGATATGCATCCGCTGGATTTCAGTCTGCTGAACCGGCGCGAGGCTGACGAAGAGCCTGA +AGATGATGTGCTGATGCAGAAAGCGGCAGGGCTTGCCGGAGGTGTCCGCTTTGGCCCGGA +CGGGAATGAAGTTATCCCCGCTTCCCCGGATGTGGCGGACATGACGGAGGATGACGTAAT +GCTGATGACAGTATCAGAAGGGATCGCAGGAGGAGTCCGGTATGGCTGAACCGGTAGGCG +ATCTGGTCGTTGATTTGAGTCTGGATGCGGCCAGATTTGACGAGCAGATGGCCAGAGTCA +GGCGTCATTTTTCTGGTACGGAAAGTGATGCGAAAAAAACAGCGGCAGTCGTTGAACAGT +CGCTGAGCCGACAGGCGCTGGCTGCACAGAAAGCGGGGATTTCCGTCGGGCAGTATAAAG +CCGCCATGCGTATGCTGCCTGCACAGTTCACCGACGTGGCCACGCAGCTTGCAGGCGGGC +AAAGTCCGTGGCTGATCCTGCTGCAACAGGGGGGGCAGGTGAAGGACTCCTTCGGCGGGA +TGATCCCCATGTTCAGGGGGCTTGCCGGTGCGATCACCCTGCCGATGGTGGGGGCCACCT +CGCTGGCGGTGGCGACCGGTGCGCTGGCGTATGCCTGGTATCAGGGCAACTCAACCCTGT +CCGATTTCAACAAAACGCTGGTCCTTTCCGGCAATCAGGCGGGACTGACGGCAGATCGTA +TGCTGGTCCTGTCCAGAGCCGGGCAGGCGGCAGGGCTGACGTTTAACCAGACCAGCGAGT +CACTCAGCGCACTGGTTAAGGCGGGGGTAAGCGGTGAGGCTCAGATTGCGTCCATCAGCC +AGAGTGTGGCGCGTTTCTCCTCTGCATCCGGCGTGGAGGTGGACAAGGTCGCTGAAGCCT +TCGGGAAGCTGACCACAGACCCGACGTCGGGGCTGACGGCGATGGCTCGCCAGTTCCATA +ACGTGTCGGCGGAGCAGATTGCGTATGTTGCTCAGTTGCAGCGTTCCGGCGATGAAGCCG +GGGCATTGCAGGCGGCGAACGAGGCCGCAACGAAAGGGTTTGATGACCAGACCCGCCGCC +TGAAAGAGAACATGGGCACGCTGGAGACCTGGGCAGACAGGACTGCGCGGGCATTCAAAT +CCATGTGGGATGCGGTGCTGGATATTGGTCGTCCTGATACCGCGCAGGAGATGCTGATTA +AGGCAGAGGCTGCGTATAAGAAAGCAGACGACATCTGGAATCTGCGCAAGGATGATTATT +TTGTTAACGATGAAGCGCGGGCGCGTTACTGGGATGATCGTGAAAAGGCCCGTCTTGCGC +TTGAAGCCGCCCGAAAGAAGGCTGAGCAGCAGACTCAACAGGACAAAAATGCGCAGCAGC +AGAGCGATACCGAAGCGTCACGGCTGAAATATACCGAAGAGGCGCAGAAGGCTTACGAAC +GGCTGCAGACGCCGCTGGAGAAATATACCGCCCGTCAGGAAGAACTGAACAAGGCACTGA +AAGACGGGAAAATCCTGCAGGCGGATTACAACACGCTGATGGCGGCGGCGAAAAAGGATT +ATGAAGCGACGCTGAAAAAGCCGAAACAGTCCAGCGTGAAGGTGTCTGCGGGCGATCGTC +AGGAAGACAGTGCTCATGCTGCCCTGCTGACGCTTCAGGCAGAACTCCGGACGCTGGAGA +AGCATGCCGGAGCAAATGAGAAAATCAGCCAGCAGCGCCGGGATTTGTGGAAGGCGGAGA +GTCAGTTCGCGGTACTGGAGGAGGCGGCGCAACGTCGCCAGCTGTCTGCACAGGAGAAAT +CCCTGCTGGCGCATAAAGATGAGACGCTGGAGTACAAACGCCAGCTGGCTGCACTTGGCG +ACAAGGTTACGTATCAGGAGCGCCTGAACGCGCTGGCGCAGCAGGCGGATAAATTCGCAC +AGCAGCAACGGGCAAAACGGGCCGCCATTGATGCGAAAAGCCGGGGGCTGACTGACCGGC +AGGCAGAACGGGAAGCCACGGAACAGCGCCTGAAGGAACAGTATGGCGATAATCCGCTGG +CGCTGAATAACGTCATGTCAGAGCAGAAAAAGACCTGGGCGGCTGAAGACCAGCTTCGCG +GGAACTGGATGGCAGGCCTGAAGTCCGGCTGGAGTGAGTGGGAAGAGAGCGCCACGGACA +GTATGTCGCAGGTAAAAAGTGCAGCCACGCAGACCTTTGATGGTATTGCACAGAATATGG +CGGCGATGCTGACCGGCAGTGAGCAGAACTGGCGCAGCTTCACCCGTTCCGTGCTGTCCA +TGATGACAGAAATTCTGCTTAAGCAGGCAATGGTGGGGATTGTCGGGAGTATCGGCAGCG +CCATTGGCGGGGCTGTTGGTGGCGGCGCATCCGCGTCAGGCGGTACAGCCATTCAGGCCG +CTGCGGCGAAATTCCATTTTGCAACCGGAGGATTTACGGGAACCGGCGGCAAATATGAGC +CAGCGGGGATTGTTCACCGTGGTGAGTTTGTCTTCACGAAGGAGGCAACCAGCCGGATTG +GCGTGGGGAATCTTTACCGGCTGATGCGCGGCTATGCCACCGGCGGTTATGTCGGTACAC +CGGGCAGCATGGCAGACAGCCGGTCGCAGGCGTCCGGGACGTTTGAGCAGAATAACCATG +TGGTGATTAACAACGACGGCACGAACGGGCAGATAGGTCCGGCTGCTCTGAAGGCGGTGT +ATGACATGGCCCGCAAGGGTGCCCGTGATGAAATTCAGACACAGATGCGTGATGGTGGCC +TGTTCTCCGGAGGTGGACGATGAAGACCTTCCGCTGGAAAGTGAAACCCGGTATGGATGT +GGCTTCGGTCCCTTCTGTAAGAAAGGTGCGCTTTGGTGATGGCTATTCTCAGCGAGCGCC +TGCCGGGCTGAATGCCAACCTGAAAACGTACAGCGTGACGCTTTCTGTCCCCCGTGAGGA +GGCCACGGTACTGGAGTCGTTTCTGGAAGAGCACGGGGGCTGGAAATCCTTTCTGTGGAC +GCCGCCTTATGAGTGGCGGCAGATAAAGGTGACCTGCGCAAAATGGTCGTCGCGGGTCAG +TATGCTGCGTGTTGAGTTCAGCGCAGAGTTTGAACAGGTGGTGAACTGATGCAGGATATC +CGGCAGGAAACACTGAATGAATGCACCCGTGCGGAGCAGTCGGCCAGCGTGGTGCTCTGG +GAAATCGACCTGACAGAGGTCGGTGGAGAACGTTATTTTTTCTGTAATGAGCAGAACGAA +AAAGGTGAGCCGGTCACCTGGCAGGGGCGACAGTATCAGCCGTATCCCATTCAGGGGAGC +GGTTTTGAACTGAATGGCAAAGGCACCAGTACGCGCCCCACGCTGACGGTTTCTAACCTG +TACGGTATGGTCACCGGGATGGCGGAAGATATGCAGAGTCTGGTCGGCGGAACGGTGGTC +CGGCGTAAGGTTTACGCCCGTTTTCTGGATGCGGTGAACTTCGTCAACGGAAACAGTTAC +GCCGATCCGGAGCAGGAGGTGATCAGCCGCTGGCGCATTGAGCAGTGCAGCGAACTGAGC +GCGGTGAGTGCCTCCTTTGTACTGTCCACGCCGACGGAAACGGATGGCGCTGTTTTTCCG +GGACGTATCATGCTGGCCAACACCTGCACCTGGACCTATCGCGGTGACGAGTGCGGTTAT +AGCGGTCCGGCTGTCGCGGATGAATATGACCAGCCAACGTCCGATATCACGAAGGATAAA +TGCAGCAAATGCCTGAGCGGTTGTAAGTTCCGCAATAACGTCGGCAACTTTGGCGGCTTC +CTTTCCATTAACAAACTTTCGCAGTAAATCCCATGACACAGACAGAATCAGCGATTCTGG +CGCACGCCCGGCGATGTGCGCCAGCGGAGTCGTGCGGCTTCGTGGTAAGCACGCCGGAGG +GGGAAAGATATTTCCCCTGCGTGAATATCTCCGGTGAGCCGGAGGCTATTTCCGTATGTC +GCCGGAAGACTGGCTGCAGGCAGAAATGCAGGGTGAGATTGTGGCGCTGGTCCACAGCCA +CCCCGGTGGTCTGCCCTGGCTGAGTGAGGCCGACCGGCGGCTGCAGGTGCAGAGTGATTT +GCCGTGGTGGCTGGTCTGCCGGGGGACGATTCATAAGTTCCGCTGTGTGCCGCATCTCAC +CGGGCGGCGCTTTGAGCACGGTGTGACGGACTGTTACACACTGTTCCGGGATGCTTATCA +TCTGGCGGGGATTGAGATGCCGGACTTTCATCGTGAGGATGACTGGTGGCGTAACGGCCA +GAATCTCTATCTGGATAATCTGGAGGCGACGGGGCTGTATCAGGTGCCGTTGTCAGCGGC +ACAGCCGGGCGATGTGCTGCTGTGCTGTTTTGGTTCATCAGTGCCGAATCACGCCGCAAT +TTACTGCGGCGACGGCGAGCTGCTGCACCATATTCCTGAACAACTGAGCAAACGAGAGAG +GTACACCGACAAATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGCATGGCGCGC +ATCTGCCTTTACGGGGATTTACAACGATTTGGTCGCCGCATCGACCTTCGTGTGAAAACG +GGGGCTGAAGCCATCCGGGCACTGGCCACACAGCTCCCGGCGTTTCGTCAGAAACTGAGC +GACGGCTGGTATCAGGTACGGATTGCCGGGCGGGACGTCAGCACGTCCGGGTTAACGGCG +CAGTTACATGAGACTCTGCCTGATGGCGCTGTAATTCATATTGTTCCCAGAGTCGCCGGG +GCCAAGTCAGGTGGCGTATTCCAGATTGTCCTGGGGGCTGCCGCCATTGCCGGATCATTC +TTTACCGCCGGAGCCACCCTTGCAGCATGGGGGGCAGCCATTGGGGCCGGTGGTATGACC +GGCATCCTGTTTTCTCTCGGTGCCAGTATGGTGCTCGGTGGTGTGGCGCAGATGCTGGCA +CCGAAAGCCAGAACTCCCCGTATACAGACAACGGATAACGGTAAGCAGAACACCTATTTC +TCCTCACTGGATAACATGGTTGCCCAGGGCAATGTTCTGCCTGTTCTGTACGGGGAAATG +CGCGTGGGGTCACGCGTGGTTTCTCAGGAGATCAGCACGGCAGACGAAGGGGACGGTGGT +CAGGTTGTGGTGATTGGTCGCTGATGCAAAATGTTTTATGTGAAACCGCCTGCGGGCGGT +TTTGTCATTTATGGAGCGTGAGGAATGGGTAAAGGAAGCAGTAAGGGGCATACCCCGCGC +GAAGCGAAGGACAACCTGAAGTCCACGCAGTTGCTGAGTGTGATCGATGCCATCAGCGAA +GGGCCGATTGAAGGTCCGGTGGATGGCTTAAAAAGCGTGCTGCTGAACAGTACGCCGGTG +CTGGACACTGAGGGGAATACCAACATATCCGGTGTCACGGTGGTGTTCCGGGCTGGTGAG +CAGGAGCAGACTCCGCCGGAGGGATTTGAATCCTCCGGCTCCGAGACGGTGCTGGGTACG +GAAGTGAAATATGACACGCCGATCACCCGCACCATTACGTCTGCAAACATCGACCGTCTG +CGCTTTACCTTCGGTGTACAGGCACTGGTGGAAACCACCTCAAAGGGTGACAGGAATCCG +TCGGAAGTCCGCCTGCTGGTTCAGATACAACGTAACGGTGGCTGGGTGACGGAAAAAGAC +ATCACCATTAAGGGCAAAACCACCTCGCAGTATCTGGCCTCGGTGGTGATGGGTAACCTG +CCGCCGCGCCCGTTTAATATCCGGATGCGCAGGATGACGCCGGACAGCACCACAGACCAG +CTGCAGAACAAAACGCTCTGGTCGTCATACACTGAAATCATCGATGTGAAACAGTGCTAC +CCGAACACGGCACTGGTCGGCGTGCAGGTGGACTCGGAGCAGTTCGGCAGCCAGCAGGTG +AGCCGTAATTATCATCTGCGCGGGCGTATTCTGCAGGTGCCGTCGAACTATAACCCGCAG +ACGCGGCAATACAGCGGTATCTGGGACGGAACGTTTAAACCGGCATACAGCAACAACATG +GCCTGGTGTCTGTGGGATATGCTGACCCATCCGCGCTACGGCATGGGGAAACGTCTTGGT +GCGGCGGATGTGGATAAATGGGCGCTGTATGTCATCGGCCAGTACTGCGACCAGTCAGTG +CCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGCGTACCTGACCACACAG +CGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCGCTGTATGCCGGTATGG +AACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAAGACGTGGACCTATAAC +CGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTACAGCTTCAGCGCCCTG +AAGGACCGCCATAATGCCGTTGAGGTGAACTGGATTGACCCGAACAACGGCTGGGAGACG +GCGACAGAGCTTGTTGAAGATACGCAGGCCATTGCCCGTTACGGTCGTAATGTTACGAAG +ATGGATGCCTTTGGCTGTACCAGCCGGGGGCAGGCACACCGCGCCGGGCTGTGGCTGATT +AAAACAGAACTGCTGGAAACGCAGACCGTGGATTTCAGCGTCGGCGCAGAAGGGCTTCGC +CATGTACCGGGCGATGTTATTGAAATCTGCGATGATGACTATGCCGGTATCAGCACCGGT +GGTCGTGTGCTGGCGGTGAACAGCCAGACCCGGACGCTGACGCTCGACCGTGAAATCACG +CTGCCATCCTCCGGTACCGCGCTGATAAGCCTGGTTGACGGAAGTGGCAATCCGGTCAGC +GTGGAGGTTCAGTCCGTCACCGACGGCGTGAAGGTAAAAGTGAGCCGTGTTCCTGACGGT +GTTGCTGAATACAGCGTATGGGAGCTGAAGCTGCCGACGCTGCGCCAGCGACTGTTCCGC +TGCGTGAGTATCCGTGAGAACGACGACGGCACGTATGCCATCACCGCCGTGCAGCATGTG +CCGGAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACAGAGTGGCACG +GTGAATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCACTGCAGACAGC +GGGGAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGGCGTGAGTTTC +CTGCTCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGGCCCGG +ACGACGGAAACCACATACCGCTTCACGCAACTGGCGCTGGGGAACTACAGGCTGACAGTC +CGGGCGGTAAATGCGTGGGGGCAGCAGGGCGATCCGGCGTCGGTATCGTTCCGGATTGCC +GCACCGGCAGCACCGTCGAGGATTGAGCTGACGCCGGGCTATTTTCAGATAACCGCCACG +CCGCATCTTGCCGTTTATGACCCGACGGTACAGTTTGAGTTCTGGTTCTCGGAAAAGCAG +ATTGCGGATATCAGACAGGTTGAAACCAGCACGCGTTATCTTGGTACGGCGCTGTACTGG +ATAGCCGCCAGTATCAATATCAAACCGGGCCATGATTATTACTTTTATATCCGCAGTGTG +AACACCGTTGGCAAATCGGCATTCGTGGAGGCCGTCGGTCGGGCGAGCGATGATGCGGAA +GGTTACCTGGATTTTTTCAAAGGCAAGATAACCGAATCCCATCTCGGCAAGGAGCTGCTG +GAAAAAGTCGAGCTGACGGAGGATAACGCCAGCAGACTGGAGGAGTTTTCGAAAGAGTGG +AAGGATGCCAGTGATAAGTGGAATGCCATGTGGGCTGTCAAAATTGAGCAGACCAAAGAC +GGCAAACATTATGTCGCGGGTATTGGCCTCAGCATGGAGGACACGGAGGAAGGCAAACTG +AGCCAGTTTCTGGTTGCCGCCAATCGTATCGCATTTATTGACCCGGCAAACGGGAATGAA +ACGCCGATGTTTGTGGCGCAGGGCAACCAGATATTCATGAACGACGTGTTCCTGAAGCGC +CTGACGGCCCCCACCATTACCAGCGGCGGCAATCCTCCGGCCTTTTCCCTGACACCGGAC +GGAAAGCTGACCGCTAAAAATGCGGATATCAGTGGCAGTGTGAATGCGAACTCCGGGACG +CTCAGTAATGTGACGATAGCTGAAAACTGTACGATAAACGGTACGCTGAGGGCGGAAAAA +ATCGTCGGGGACATTGTAAAGGCGGCGAGCGCGGCTTTTCCGCGCCAGCGTGAAAGCAGT +GTGGACTGGCCGTCAGGTACCCGTACTGTCACCGTGACCGATGACCATCCTTTTGATCGC +CAGATAGTGGTGCTTCCGCTGACGTTTCGCGGAAGTAAGCGTACTGTCAGCGGCAGGACA +ACGTATTCGATGTGTTATCTGAAAGTACTGATGAACGGTGCGGTGATTTATGATGGCGCG +GCGAACGAGGCGGTACAGGTGTTCTCCCGTATTGTTGACATGCCAGCGGGTCGGGGAAAC +GTGATCCTGACGTTCACGCTTACGTCCACACGGCATTCGGCAGATATTCCGCCGTATACG +TTTGCCAGCGATGTGCAGGTTATGGTGATTAAGAAACAGGCGCTGGGCATCAGCGTGGTC +TGAGTGTGTTACAGAGGTTCGTCCGGGAACGGGCGTTTTATTATAAAACAGTGAGAGGTG +AACGATGCGTAATGTGTGTATTGCCGTTGCTGTCTTTGCCGCACTTGCGGTGACAGTCAC +TCCGGCCCGTGCGGAAGGTGGACATGGTACGTTTACGGTGGGCTATTTTCAAGTGAAACC +GGGTACATTGCCGTCGTTGTCGGGCGGGGATACCGGTGTGAGTCATCTGAAAGGGATTAA +CGTGAAGTACCGTTATGAGCTGACGGACAGTGTGGGGGTGATGGCTTCCCTGGGGTTCGC +CGCGTCGAAAAAGAGCAGCACAGTGATGACCGGGGAGGATACGTTTCACTATGAGAGCCT +GCGTGGACGTTATGTGAGCGTGATGGCCGGACCGGTTTTACAAATCAGTAAGCAGGTCAG +TGCGTACGCCATGGCCGGAGTGGCTCACAGTCGGTGGTCCGGCAGTACAATGGATTACCG +TAAGACGGAAATCACTCCCGGGTATATGAAAGAGACGACCACTGCCAGGGACGAAAGTGC +AATGCGGCATACCTCAGTGGCGTGGAGTGCAGGTATACAGATTAATCCGGCAGCGTCCGT +CGTTGTTGATATTGCTTATGAAGGCTCCGGCAGTGGCGACTGGCGTACTGACGGATTCAT +CGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCG +GAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAG +ACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCA +CCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCA +TGGATGTGGAGTACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGC +ACGCCGGGACCATCACCGTGTATGAAGATTCACAACCGGGGACGCTGAATGATTTTCTCT +GTGCCATGACGGAGGATGATGCCCGGCCGGAGGTGCTGCGTCGTCTTGAACTGATGGTGG +AAGAGGTGGCGCGTAACGCGTCCGTGGTGGCACAGAGTACGGCAGACGCGAAGAAATCAG +CCGGCGATGCCAGTGCATCAGCTGCTCAGGTCGCGGCCCTTGTGACTGATGCAACTGACT +CAGCACGCGCCGCCAGCACGTCCGCCGGACAGGCTGCATCGTCAGCTCAGGAAGCGTCCT +CCGGCGCAGAAGCGGCATCAGCAAAGGCCACTGAAGCGGAAAAAAGTGCCGCAGCCGCAG +AGTCCTCAAAAAACGCGGCGGCCACCAGTGCCGGTGCGGCGAAAACGTCAGAAACGAATG +CTGCAGCGTCACAACAATCAGCCGCCACGTCTGCCTCCACCGCGGCCACGAAAGCGTCAG +AGGCCGCCACTTCAGCACGAGATGCGGTGGCCTCAAAAGAGGCAGCAAAATCATCAGAAA +CGAACGCATCATCAAGTGCCGGTCGTGCAGCTTCCTCGGCAACGGCGGCAGAAAATTCTG +CCAGGGCGGCAAAAACGTCCGAGACGAATGCCAGGTCATCTGAAACAGCAGCGGAACGGA +GCGCCTCTGCCGCGGCAGACGCAAAAACAGCGGCGGCGGGGAGTGCGTCAACGGCATCCA +CGAAGGCGACAGAGGCTGCGGGAAGTGCGGTATCAGCATCGCAGAGCAAAAGTGCGGCAG +AAGCGGCGGCAATACGTGCAAAAAATTCGGCAAAACGTGCAGAAGATATAGCTTCAGCTG +TCGCGCTTGAGGATGCGGACACAACGAGAAAGGGGATAGTGCAGCTCAGCAGTGCAACCA +ACAGCACGTCTGAAACGCTTGCTGCAACGCCAAAGGCGGTTAAGGTGGTAATGGATGAAA +CGAACAGAAAAGCCCACTGGACAGTCCGGCACTGACCGGAACGCCAACAGCACCAACCGC +GCTCAGGGGAACAAACAATACCCAGATTGCGAACACCGCTTTTGTACTGGCCGCGATTGC +AGATGTTATCGACGCGTCACCTGACGCACTGAATACGCTGAATGAACTGGCCGCAGCGCT +CGGGAATGATCCAGATTTTGCTACCACCATGACTAACGCGCTTGCGGGTAAACAACCGAA +GAATGCGACACTGACGGCGCTGGCAGGGCTTTCCACGGCGAAAAATAAATTACCGTATTT +TGCGGAAAATGATGCCGCCAGCCTGACTGAACTGACTCAGGTTGGCAGGGATATTCTGGC +AAAAAATTCCGTTGCAGATGTTCTTGAATACCTTGGGGCCGGTGAGAATTCGGCCTTTCC +GGCAGGTGCGCCGATCCCGTGGCCATCAGATATCGTTCCGTCTGGCTACGTCCTGATGCA +GGGGCAGGCGTTTGACAAATCAGCCTACCCAAAACTTGCTGTCGCGTATCCATCGGGTGT +GCTTCCTGATATGCGAGGCTGGACAATCAAGGGGAAACCCGCCAGCGGTCGTGCTGTATT +GTCTCAGGAACAGGATGGAATTAAGTCGCACACCCACAGTGCCAGTGCATCCGGTACGGA +TTTGGGGACGAAAACCACATCGTCGTTTGATTACGGGACGAAAACAACAGGCAGTTTCGA +TTACGGCACCAAATCGACGAATAACACGGGGGCTCATGCTCACAGTCTGAGCGGTTCAAC +AGGGGCCGCGGGTGCTCATGCCCACACAAGTGGTTTAAGGATGAACAGTTCTGGCTGGAG +TCAGTATGGAACAGCAACCATTACAGGAAGTTTATCCACAGTTAAAGGAACCAGCACACA +GGGTATTGCTTATTTATCGAAAACGGACAGTCAGGGCAGCCACAGTCACTCATTGTCCGG +TACAGCCGTGAGTGCCGGTGCACATGCGCATACAGTTGGTATTGGTGCGCACCAGCATCC +GGTTGTTATCGGTGCTCATGCCCATTCTTTCAGTATTGGTTCACACGGACACACCATCAC +CGTTAACGCTGCGGGTAACGCGGAAAACACCGTCAAAAACATTGCATTTAACTATATTGT +GAGGCTTGCATAATGGCATTCAGAATGAGTGAACAACCACGGACCATAAAAATTTATAAT +CTGCTGGCCGGAACTAATGAATTTATTGGTGAAGGTGACGCATATATTCCGCCTCATACC +GGTCTGCCTGCAAACAGTACCGATATTGCACCGCCAGATATTCCGGCTGGCTTTGTGGCT +GTTTTCAACAGTGATGAGGCATCGTGGCATCTCGTTGAAGACCATCGGGGTAAAACCGTC +TATGACGTGGCTTCCGGCGACGCGTTATTTATTTCTGAACTCGGTCCGTTACCGGAAAAT +TTTACCTGGTTATCGCCGGGAGGGGAATATCAGAAGTGGAACGGCACAGCCTGGGTGAAG +GATACGGAAGCAGAAAAACTGTTCCGGATCCGGGAGGCGGAAGAAACAAAAAAAAGCCTG +ATGCAGGTAGCCAGTGAGCATATTGCGCCGCTTCAGGATGCTGCAGATCTGGAAATTGCA +ACGAAGGAAGAAACCTCGTTGCTGGAAGCCTGGAAGAAGTATCGGGTGTTGCTGAACCGT +GTTGATACATCAACTGCACCTGATATTGAGTGGCCTGCTGTCCCTGTTATGGAGTAATCG +TTTTGTGATATGCCGCAGAAACGTTGTATGAAATAACGTTCTGCGGTTAGTTAGTATATT +GTAAAGCTGAGTATTGGTTTATTTGGCGATTATTATCTTCAGGAGAATAATGGAAGTTCT +ATGACTCAATTGTTCATAGTGTTTACATCACCGCCAATTGCTTTTAAGACTGAACGCATG +AAATATGGTTTTTCGTCATGTTTTGAGTCTGCTGTTGATATTTCTAAAGTCGGTTTTTTT +TCTTCGTTTTCTCTAACTATTTTCCATGAAATACATTTTTGATTATTATTTGAATCAATT +CCAATTACCTGAAGTCTTTCATCTATAATTGGCATTGTATGTATTGGTTTATTGGAGTAG +ATGCTTGCTTTTCTGAGCCATAGCTCTGATATCCAAATGAAGCCATAGGCATTTGTTATT +TTGGCTCTGTCAGCTGCATAACGCCAAAAAATATATTTATCTGCTTGATCTTCAAATGTT +GTATTGATTAAATCAATTGGATGGAATTGTTTATCATAAAAAATTAATGTTTGAATGTGA +TAACCGTCCTTTAAAAAAGTCGTTTCTGCAAGCTTGGCTGTATAGTCAACTAACTCTTCT +GTCGAAGTGATATTTTTAGGCTTATCTACCAGTTTTAGACGCTCTTTAATATCTTCAGGA +ATTATTTTATTGTCATATTGTATCATGCTAAATGACAATTTGCTTATGGAGTAATCTTTT +AATTTTAAATAAGTTATTCTCCTGGCTTCATCAAATAAAGAGTCGAATGATGTTGGCGAA +ATCACATCGTCACCCATTGGATTGTTTATTTGTATGCCAAGAGAGTTACAGCAGTTATAC +ATTCTGCCATAGATTATAGCTAAGGCATGTAATAATTCGTAATCTTTTAGCGTATTAGCG +ACCCATCGTCTTTCTGATTTAATAATAGATGATTCAGTTAAATATGAAGGTAATTTCTTT +TGTGCAAGTCTGACTAACTTTTTTATACCAATGTTTAACATACTTTCATTTGTAATAAAC +TCAATGTCATTTTCTTCAATGTAAGATGAAATAAGAGTAGCCTTTGCCTCGCTATACATT +TCTAAATCGCCTTGTTTTTCTATCGTATTGCGAGAATTTTTAGCCCAAGCCATTAATGGA +TCATTTTTCCATTTTTCAATAACATTATTGTTATACCAAATGTCATATCCTATAATCTGG +TTTTTGTTTTTTTGAATAATAAATGTTACTGTTCTTGCGGTTTGGAGGAATTGATTCAAA +TTCAAGCGAAATAATTCAGGGTCAAAATATGTATCAATGCAGCATTTGAGCAAGTGCGAT +AAATCTTTAAGTCTTCTTTCCCATGGTTTTTTAGTCATAAAACTCTCCATTTTGATAGGT +TGCATGCTAGATGCTGATATATTTTAGAGGTGATAAAATTAACTGCTTAACTGTCAATGT +AATACAAGTTGTTTGATCTTTGCAATGATTCTTATCAGAAACCATATAGTAAATTAGTTA +CACAGGAAATTTTTAATATTATTATTATCATTCATTATGTATTAAAATTAGAGTTGTGGC +TTGGCTCTGCTAACACGTTGCTCATAGGAGATATGGTAGAGCCGCAGACACGTCGTATGC +AGGAACGTGCTGCGGCTGGCTGGTGAACTTCCGATAGTGCGGGTGTTGAATGATTTCCAG +TTGCTACCGATTTTACATATTTTTTGCATGAGAGAATTTGTACCACCTCCCACCGACCAT +CTATGACTGTACGCCACTGTCCCTAGGACTGCTATGTGCCGGAGCGGACATTACAAACGT +CCTTCTCGGTGCATGCCACTGTTGCCAATGACCTGCCTAGGAATTGGTTAGCAAGTTACT +ACCGGATTTTGTAAAAACAGCCCTCCTCATATAAAAAGTATTCGTTCACTTCCGATAAGC +GTCGTAATTTTCTATCTTTCATCATATTCTAGATCCCTCTGAAAAAATCTTCCGAGTTTG +CTAGGCACTGATACATAACTCTTTTCCAATAATTGGGGAAGTCATTCAAATCTATAATAG +GTTTCAGATTTGCTTCAATAAATTCTGACTGTAGCTGCTGAAACGTTGCGGTTGAACTAT +ATTTCCTTATAACTTTTACGAAAGAGTTTCTTTGAGTAATCACTTCACTCAAGTGCTTCC +CTGCCTCCAAACGATACCTGTTAGCAATATTTAATAGCTTGAAATGATGAAGAGCTCTGT +GTTTGTCTTCCTGCCTCCAGTTCGCCGGGCATTCAACATAAAAACTGATAGCACCCGGAG +TTCCGGAAACGAAATTTGCATATACCCATTGCTCACGAAAAAAAATGTCCTTGTCGATAT +AGGGATGAATCGCTTGGTGTACCTCATCTACTGCGAAAACTTGACCTTTCTCTCCCATAT +TGCAGTCGCGGCACGATGGAACTAAATTAATAGGCATCACCGAAAATTCAGGATAATGTG +CAATAGGAAGAAAATGATCTATATTTTTTGTCTGTCCTATATCACCACAAAATGGACATT +TTTCACCTGATGAAACAAGCATGTCATCGTAATATGTTCTAGCGGGTTTGTTTTTATCTC +GGAGATTATTTTCATAAAGCTTTTCTAATTTAACCTTTGTCAGGTTACCAACTACTAAGG +TTGTAGGCTCAAGAGGGTGTGTCCTGTCGTAGGTAAATAACTGACCTGTCGAGCTTAATA +TTCTATATTGTTGTTCTTTCTGCAAAAAAGTGGGGAAGTGAGTAATGAAATTATTTCTAA +CATTTATCTGCATCATACCTTCCGAGCATTTATTAAGCATTTCGCTATAAGTTCTCGCTG +GAAGAGGTAGTTTTTTCATTGTACTTTACCTTCATCTCTGTTCATTATCATCGCTTTTAA +AACGGTTCGACCTTCTAATCCTATCTGACCATTATAATTTTTTAGAATGGTTTCATAAGA +AAGCTCTGAATCAACGGACTGCGATAATAAGTGGTGGTATCCAGAATTTGTCACTTCAAG +TAAAAACACCTCACGAGTTAAAACACCTAAGTTCTCACCGAATGTCTCAATATCCGGACG +GATAATATTTATTGCTTCTCTTGACCGTAGGACTTTCCACATGCAGGATTTTGGAACCTC +TTGCAGTACTACTGGGGAATGAGTTGCAATTATTGCTACACCATTGCGTGCATCGAGTAA +GTCGCTTAATGTTCGTAAAAAAGCAGAGAGCAAAGGTGGATGCAGATGAACCTCTGGTTC +ATCGAATAAAACTAATGACTTTTCGCCAACGACATCTACTAATCTTGTGATAGTAAATAA +AACAATTGCATGTCCAGAGCTCATTCGAAGCAGATATTTCTGGATATTGTCATAAAACAA +TTTAGTGAATTTATCATCGTCCACTTGAATCTGTGGTTCATTACGTCTTAACTCTTCATA +TTTAGAAATGAGGCTGATGAGTTCCATATTTGAAAAGTTTTCATCACTACTTAGTTTTTT +GATAGCTTCAAGCCAGAGTTGTCTTTTTCTATCTACTCTCATACAACCAATAAATGCTGA +AATGAATTCTAAGCGGAGATCGCCTAGTGATTTTAAACTATTGCTGGCAGCATTCTTGAG +TCCAATATAAAAGTATTGTGTACCTTTTGCTGGGTCAGGTTGTTCTTTAGGAGGAGTAAA +AGGATCAAATGCACTAAACGAAACTGAAACAAGCGATCGAAAATATCCCTTTGGGATTCT +TGACTCGATAAGTCTATTATTTTCAGAGAAAAAATATTCATTGTTTTCTGGGTTGGTGAT +TGCACCAATCATTCCATTCAAAATTGTTGTTTTACCACACCCATTCCGCCCGATAAAAGC +ATGAATGTTCGTGCTGGGCATAGAATTAACCGTCACCTCAAAAGGTATAGTTAAATCACT +GAATCCGGGAGCACTTTTTCTATTAAATGAAAAGTGGAAATCTGACAATTCTGGCAAACC +ATTTAACACACGTGCGAACTGTCCATGAATTTCTGAAAGAGTTACCCCTCTAAGTAATGA +GGTGTTAAGGACGCTTTCATTTTCAATGTCGGCTAATCGATTTGGCCATACTACTAAATC +CTGAATAGCTTTAAGAAGGTTATGTTTAAAACCATCGCTTAATTTGCTGAGATTAACATA +GTAGTCAATGCTTTCACCTAAGGAAAAAAACATTTCAGGGAGTTGACTGAATTTTTTATC +TATTAATGAATAAGTGCTTACTTCTTCTTTTTGACCTACAAAACCAATTTTAACATTTCC +GATATCGCATTTTTCACCATGCTCATCAAAGACAGTAAGATAAAACATTGTAACAAAGGA +ATAGTCATTCCAACCATCTGCTCGTAGGAATGCCTTATTTTTTTCTACTGCAGGAATATA +CCCGCCTCTTTCAATAACACTAAACTCCAACATATAGTAACCCTTAATTTTATTAAAATA +ACCGCAATTTATTTGGCGGCAACACAGGATCTCTCTTTTAAGTTACTCTCTATTACATAC +GTTTTCCATCTAAAAATTAGTAGTATTGAACTTAACGGGGCATCGTATTGTAGTTTTCCA +TATTTAGCTTTCTGCTTCCTTTTGGATAACCCACTGTTATTCATGTTGCATGGTGCACTG +TTTATACCAACGATATAGTCTATTAATGCATATATAGTATCGCCGAACGATTAGCTCTTC +AGGCTTCTGAAGAAGCGTTTCAAGTACTAATAAGCCGATAGATAGCCACGGACTTCGTAG +CCATTTTTCATAAGTGTTAACTTCCGCTCCTCGCTCATAACAGACATTCACTACAGTTAT +GGCGGAAAGGTATGCATGCTGGGTGTGGGGAAGTCGTGAAAGAAAAGAAGTCAGCTGCGT +CGTTTGACATCACTGCTATCTTCTTACTGGTTATGCAGGTCGTAGTGGGTGGCACACAAA +GCTTTGCACTGGATTGCGAGGCTTTGTGCTTCTCTGGAGTGCGACAGGTTTGATGACAAA +AAATTAGCGCAAGAAGACAAAAATCACCTTGCGCTAATGCTCTGTTACAGGTCACTAATA +CCATCTAAGTAGTTGATTCATAGTGACTGCATATGTTGTGTTTTACAGTATTATGTAGTC +TGTTTTTTATGCAAAATCTAATTTAATATATTGATATTTATATCATTTTACGTTTCTCGT +TCAGCTTTTTTATACTAAGTTGGCATTATAAAAAAGCATTGCTTATCAATTTGTTGCAAC +GAACAGGTCACTATCAGTCAAAATAAAATCATTATTTGATTTCAATTTTGTCCCACTCCC +TGCCTCTGTCATCACGATACTGTGATGCCATGGTGTCCGACTTATGCCCGAGAAGATGTT +GAGCAAACTTATCGCTTATCTGCTTCTCATAGAGTCTTGCAGACAAACTGCGCAACTCGT +GAAAGGTAGGCGGATCCCCTTCGAAGGAAAGACCTGATGCTTTTCGTGCGCGCATAAAAT +ACCTTGATACTGTGCCGGATGAAAGCGGTTCGCGACGAGTAGATGCAATTATGGTTTCTC +CGCCAAGAATCTCTTTGCATTTATCAAGTGTTTCCTTCATTGATATTCCGAGAGCATCAA +TATGCAATGCTGTTGGGATGGCAATTTTTACGCCTGTTTTGCTTTGCTCGACATAAAGAT +ATCCATCTACGATATCAGACCACTTCATTTCGCATAAATCACCAACTCGTTGCCCGGTAA +CAACAGCCAGTTCCATTGCAAGTCTGAGCCAACATGGTGATGATTCTGCTGCTTGATAAA +TTTTCAGGTATTCGTCAGCCGTAAGTCTTGATCTCCTTACCTCTGATTTTGCTGCGCGAG +TGGCAGCGACATGGTTTGTTGTTATATGGCCTTCAGCTATTGCCTCTCGGAATGCATCGC +TCAGTGTTGATCTGATTAACTTGGCTGACGCCGCCTTGCCCTCGTCTATGTATCCATTGA +GCATTGCCGCAATTTCTTTTGTGGTGATGTCTTCAAGTGGAGCATCAGGCAGACCCCTCC +TTATTGCTTTAATTTTGCTCATGTAATTTATGAGTGTCTTCTGCTTGATTCCTCTGCTGG +CCAGGATTTTTTCGTAGCGATCAAGCCATGAATGTAACGTAACGGAATTATCACTGTTGA +TTCTCGCTGTCAGAGGCTTGTGTTTGTGTCCTGAAAATAACTCAATGTTGGCCTGTATAG +CTTCAGTGATTGCGATTCGCCTGTCTCTGCCTAATCCAAACTCTTTACCCGTCCTTGGGT +CCCTGTAGCAGTAATATCCATTGTTTCTTATATAAAGGTTAGGGGGTAAATCCCGGCGCT +CATGACTTCGCCTTCTTCCCATTTCTGATCCTCTTCAAAAGGCCACCTGTTACTGGTCGA +TTTAAGTCAACCTTTACCGCTGATTCGTGGAACAGATACTCTCTTCCATCCTTAACCGGA +GGTGGGAATATCCTGCATTCCCGAACCCATCGACGAACTGTTTCAAGGCTTCTTGGACGT +CGCTGGCGTGCGTTCCACTCCTGAAGTGTCAAGTACATCGCAAAGTCTCCGCAATTACAC +GCAAGAAAAAACCGCCATCAGGCGGCTTGGTGTTCTTTCAGTTCTTCAATTCGAATATTG +GTTACGTCTGCATGTGCTATCTGCGCCCATATCATCCAGTGGTCGTAGCAGTCGTTGATG +TTCTCCGCTTCGATAACTCTGTTGAATGGCTCTCCATTCCATTCTCCTGTGACTCGGAAG +TGCATTTATCATCTCCATAAAACAAAACCCGCCGTAGCGAGTTCAGATAAAATAAATCCC +CGCGAGTGCGAGGATTGTTATGTAATATTGGGTTTAATCATCTATATGTTTTGTACAGAG +AGGGCAAGTATCGTTTCCACCGTACTCGTGATAATAATTTTGCACGGTATCAGTCATTTC +TCGCACATTGCAGAATGGGGATTTGTCTTCATTAGACTTATAAACCTTCATGGAATATTT +GTATGCCGACTCTATATCTATACCTTCATCTACATAAACACCTTCGTGATGTCTGCATGG +AGACAAGACACCGGATCTGCACAACATTGATAACGCCCAATCTTTTTGCTCAGACTCTAA +CTCATTGATACTCATTTATAAACTCCTTGCAATGTATGTCGTTTCAGCTAAACGGTATCA +GCAATGTTTATGTAAAGAAACAGTAAGATAATACTCAACCCGATGTTTGAGTACGGTCAT +CATCTGACACTACAGACTCTGGCATCGCTGTGAAGACGACGCGAAATTCAGCATTTTCAC +AAGCGTTATCTTTTACAAAACCGATCTCACTCTCCTTTGATGCGAATGCCAGCGTCAGAC +ATCATATGCAGATACTCACCTGCATCCTGAACCCATTGACCTCCAACCCCGTAATAGCGA +TGCGTAATGATGTCGATAGTTACTAACGGGTCTTGTTCGATTAACTGCCGCAGAAACTCT +TCCAGGTCACCAGTGCAGTGCTTGATAACAGGAGTCTTCCCAGGATGGCGAACAACAAGA +AACTGGTTTCCGTCTTCACGGACTTCGTTGCTTTCCAGTTTAGCAATACGCTTACTCCCA +TCCGAGATAACACCTTCGTAATACTCACGCTGCTCGTTGAGTTTTGATTTTGCTGTTTCA +AGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGCGT +TTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCACAATCGATGGTGTT +ACCAATTCATGGAAAAGGTCTGCGTCAAATCCCCAGTCGTCATGCATTGCCTGCTCTGCC +GCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCTCTGTTTACTGATAA +GTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAACGACCAGGCGTCTTC +GTTCATCTATCGGATCGCCACACTCACAACAATGAGTGGCAGATATAGCCTGGTGGTTCA +GGCGGCGCATTTTTATTGCTGTGTTGCGCTGTAATTCTTCTATTTCTGATGCTGAATCAA +TGATGTCTGCCATCTTTCATTAATCCCTGAACTGTTGGTTAATACGCTTGAGGGTGAATG +CGAATAATAAAAAAGGAGCCTGTAGCTCCCTGATGATTTTGCTTTTCATGTTCATCGTTC +CTTAAAGACGCCGTTTAACATGCCGATTGCCAGGCTTAAATGAGTCGGTGTGAATCCCAT +CAGCGTTACCGTTTCGCGGTGCTTCTTCAGTACGCTACGGCAAATGTCATCGACGTTTTT +ATCCGGAAACTGCTGTCTGGCTTTTTTTGATTTCAGAATTAGCCTGACGGGCAATGCTGC +GAAGGGCGTTTTCCTGCTGAGGTGTCATTGAACAAGTCCCATGTCGGCAAGCATAAGCAC +ACAGAATATGAAGCCCGCTGCCAGAAAAATGCATTCCGTGGTTGTCATACCTGGTTTCTC +TCATCTGCTTCTGCTTTCGCCACCATCATTTCCAGCTTTTGTGAAAGGGATGCGGCTAAC +GTATGAAATTCTTCGTCTGTTTCTACTGGTATTGGCACAAACCTGATTCCAATTTGAGCA +AGGCTATGTGCCATCTCGATACTCGTTCTTAACTCAACAGAAGATGCTTTGTGCATACAG +CCCCTCGTTTATTATTTATCTCCTCAGCCAGCCGCTGTGCTTTCAGTGGATTTCGGATAA +CAGAAAGGCCGGGAAATACCCAGCCTCGCTTTGTAACGGAGTAGACGAAAGTGATTGCGC +CTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAAT +TTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACGATCTCGTCAAAACTCGC +CATGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCACGCTTCATACGCGG +GTCATAGTTGGCAAAGTACCAGGCATTTTTTCGCGTCACCCACATGCTGTACTGCACCTG +GGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAATCCCG +GGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAGA +GCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGCC +GGAAGTGAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCAGTGC +TTTAGCGTTAACTTCCGGAGCCACACCGGTGCAAACCTCAGCAAGCAGGGTGTGGAAGTA +GGACATTTTCATGTCAGGCCACTTCTTTCCGGAGCGGGGTTTTGCTATCACGTTGTGAAC +TTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCCCCCTGTTCGAC +AGCTCTCACATCGATCCCGGTACGCTGCAGGATAATGTCCGGTGTCATGCTGCCACCTTC +TGCTCTGCGGCTTTCTGTTTCAGGAATCCAAGAGCTTTTACTGCTTCGGCCTGTGTCAGT +TCTGACGATGCACGAATGTCGCGGCGAAATATCTGGGAACAGAGCGGCAATAAGTCGTCA +TCCCATGTTTTATCCAGGGCGATCAGCAGAGTGTTAATCTCCTGCATGGTTTCATCGTTA +ACCGGAGTGATGTCGCGTTCCGGCTGACGTTCTGCAGTGTATGCAGTATTTTCGACAATG +CGCTCGGCTTCATCCTTGTCATAGATACCAGCAAATCCGAAGGCCAGACGGGCACACTGA +ATCATGGCTTTATGACGTAACATCCGTTTGGGATGCGACTGCCACGGCCCCGTGATTTCT +CTGCCTTCGCGAGTTTTGAATGGTTCGCGGCGGCATTCATCCATCCATTCGGTAACGCAG +ATCGGATGATTACGGTCCTTGCGGTAAATCCGGCATGTACAGGATTCATTGTCCTGCTCA +AAGTCCATGCCATCAAACTGCTGGTTTTCATTGATGATGCGGGACCAGCCATCAACGCCC +ACCACCGGAACGATGCCATTCTGCTTATCAGGAAAGGCGTAAATTTCTTTCGTCCACGGA +TTAAGGCCGTACTGGTTGGCAACGATCAGTAATGCGATGAACTGCGCATCGCTGGCATCA +CCTTTAAATGCCGTCTGGCGAAGAGTGGTGATCAGTTCCTGTGGGTCGACAGAATCCATG +CCGACACGTTCAGCCAGCTTCCCAGCCAGCGTTGCGAGTGCAGTACTCATTCGTTTTATA +CCTCTGAATCAATATCAACCTGGTGGTGAGCAATGGTTTCAACCATGTACCGGATGTGTT +CTGCCATGCGCTCCTGAAACTCAACATCGTCATCAAACGCACGGGTAATGGATTTTTTGC +TGGCCCCGTGGCGTTGCAAATGATCGATGCATAGCGATTCAAACAGGTGCTGGGGCAGGC +CTTTTTCCATGTCGTCTGCCAGTTCTGCCTCTTTCTCTTCACGGGCGAGCTGCTGGTAGT +GACGCGCCCAGCTCTGAGCCTCAAGACGATCCTGAATGTAATAAGCGTTCATGGCTGAAC +TCCTGAAATAGCTGTGAAAATATCGCCCGCGAAATGCCGGGCTGATTAGGAAAACAGGAA +AGGGGGTTAGTGAATGCTTTTGCTTGATCTCAGTTTCAGTATTAATATCCATTTTTTATA +AGCGTCGACGGCTTCACGAAACATCTTTTCATCGCCAATAAAAGTGGCGATAGTGAATTT +AGTCTGGATAGCCATAAGTGTTTGATCCATTCTTTGGGACTCCTGGCTGATTAAGTATGT +CGATAAGGCGTTTCCATCCGTCACGTAATTTACGGGTGATTCGTTCAAGTAAAGATTCGG +AAGGGCAGCCAGCAACAGGCCACCCTGCAATGGCATATTGCATGGTGTGCTCCTTATTTA +TACATAACGAAAAACGCCTCGAGTGAAGCGTTATTGGTATGCGGTAAAACCGCACTCAGG +CGGCCTTGATAGTCATATCATCTGAATCAAATATTCCTGATGTATCGATATCGGTAATTC +TTATTCCTTCGCTACCATCCATTGGAGGCCATCCTTCCTGACCATTTCCATCATTCCAGT +CGAACTCACACACAACACCATATGCATTTAAGTCGCTTGAAATTGCTATAAGCAGAGCAT +GTTGCGCCAGCATGATTAATACAGCATTTAATACAGAGCCGTGTTTATTGAGTCGGTATT +CAGAGTCTGACCAGAAATTATTAATCTGGTGAAGTTTTTCCTCTGTCATTACGTCATGGT +CGATTTCAATTTCTATTGATGCTTTCCAGTCGTAATCAATGATGTATTTTTTGATGTTTG +ACATCTGTTCATATCCTCACAGATAAAAAATCGCCCTCACACTGGAGGGCAAAGAAGATT +TCCAATAATCAGAACAAGTCGGCTCCTGTTTAGTTACGAGCGACATTGCTCCGTGTATTC +ACTCGTTGGAATGAATACACAGTGCAGTGTTTATTCTGTTATTTATGCCAAAAATAAAGG +CCACTATCAGGCAGCTTTGTTGTTCTGTTTACCAAGTTCTCTGGCAATCATTGCCGTCGT +TCGTATTGCCCATTTATCGACATATTTCCCATCTTCCATTACAGGAAACATTTCTTCAGG +CTTAACCATGCATTCCGATTGCAGCTTGCATCCATTGCATCGCTTGAATTGTCCACACCA +TTGATTTTTATCAATAGTCGTAGTCATACGGATAGTCCTGGTATTGTTCCATCACATCCT +GAGGATGCTCTTCGAACTCTTCAAATTCTTCTTCCATATATCACCTTAAATAGTGGATTG +CGGTAGTAAAGATTGTGCCTGTCTTTTAACCACATCAGGCTCGGTGGTTCTCGTGTACCC +CTACAGCGAGAAATCGGATAAACTATTACAACCCCTACAGTTTGATGAGTATAGAAATGG +ATCCACTCGTTATTCTCGGACGAGTGTTCAGTAATGAACCTCTGGAGAGAACCATGTATA +TGATCGTTATCTGGGTTGGACTTCTGCTTTTAAGCCCAGATAACTGGCCTGAATATGTTA +ATGAGAGAATCGGTATTCCTCATGTGTGGCATGTTTTCGTCTTTGCTCTTGCATTTTCGC +TAGCAATTAATGTGCATCGATTATCAGCTATTGCCAGCGCCAGATATAAGCGATTTAAGC +TAAGAAAACGCATTAAGATGCAAAACGATAAAGTGCGATCAGTAATTCAAAACCTTACAG +AAGAGCAATCTATGGTTTTGTGCGCAGCCCTTAATGAAGGCAGGAAGTATGTGGTTACAT +CAAAACAATTCCCATACATTAGTGAGTTGATTGAGCTTGGTGTGTTGAACAAAACTTTTT +CCCGATGGAATGGAAAGCATATATTATTCCCTATTGAGGATATTTACTGGACTGAATTAG +TTGCCAGCTATGATCCATATAATATTGAGATAAAGCCAAGGCCAATATCTAAGTAACTAG +ATAAGAGGAATCGATTTTCCCTTAATTTTCTGGCGTCCACTGCATGTTATGCCGCGTTCG +CCAGGCTTGCTGTACCATGTGCGCTGATTCTTGCGCTCAATACGTTGCAGGTTGCTTTCA +ATCTGTTTGTGGTATTCAGCCAGCACTGTAAGGTCTATCGGATTTAGTGCGCTTTCTACT +CGTGATTTCGGTTTGCGATTCAGCGAGAGAATAGGGCGGTTAACTGGTTTTGCGCTTACC +CCAACCAACAGGGGATTTGCTGCTTTCCATTGAGCCTGTTTCTCTGCGCGACGTTCGCGG +CGGCGTGTTTGTGCATCCATCTGGATTCTCCTGTCAGTTAGCTTTGGTGGTGTGTGGCAG +TTGTAGTCCTGAACGAAAACCCCCCGCGATTGGCACATTGGCAGCTAATCCGGAATCGCA +CTTACGGCCAATGCTTCGTTTCGTATCACACACCCCAAAGCCTTCTGCTTTGAATGCTGC +CCTTCTTCAGGGCTTAATTTTTAAGAGCGTCACCTTCATGGTGGTCAGTGCGTCCTGCTG +ATGTGCTCAGTATCACCGCCAGTGGTATTTATGTCAACACCGCCAGAGATAATTTATCAC +CGCAGATGGTTATCTGTATGTTTTTTATATGAATTTATTTTTTGCAGGGGGGCATTGTTT +GGTAGGTGAGAGATCTGAATTGCTATGTTTAGTGAGTTGTATCTATTTATTTTTCAATAA +ATACAATTGGTTATGTGTTTTGGGGGCGATCGTGAGGCAAAGAAAACCCGGCGCTGAGGC +CGGGTTATTCTTGTTCTCTGGTCAAATTATATAGTTGGAAAACAAGGATGCATATATGAA +TGAACGATGCAGAGGCAATGCCGATGGCGATAGTGGGTATCATGTAGCCGCTTATGCTGG +AAAGAAGCAATAACCCGCAGAAAAACAAAGCTCCAAGCTCAACAAAACTAAGGGCATAGA +CAATAACTACCGATGTCATATACCCATACTCTCTAATCTTGGCCAGTCGGCGCGTTCTGC +TTCCGATTAGAAACGTCAAGGCAGCAATCAGGATTGCAATCATGGTTCCTGCATATGATG +ACAATGTCGCCCCAAGACCATCTCTATGAGCTGAAAAAGAAACACCAGGAATGTAGTGGC +GGAAAAGGAGATAGCAAATGCTTACGATAACGTAAGGAATTATTACTATGTAAACACCAG +GCATGATTCTGTTCCGCATAATTACTCCTGATAATTAATCCTTAACTTTGCCCACCTGCC +TTTTAAAACATTCCAGTATATCACTTTTCATTCTTGCGTAGCAATATGCCATCTCTTCAG +CTATCTCAGCATTGGTGACCTTGTTCAGAGGCGCTGAGAGATGGCCTTTTTCTGATAGAT +AATGTTCTGTTAAAATATCTCCGGCCTCATCTTTTGCCCGCAGGCTAATGTCTGAAAATT +GAGGTGACGGGTTAAAAATAATATCCTTGGCAACCTTTTTTATATCCCTTTTAAATTTTG +GCTTAATGACTATATCCAATGAGTCAAAAAGCTCCCCTTCAATATCTGTTGCCCCTAAGA +CCTTTAATATATCGCCAAATACAGGTAGCTTGGCTTCTACCTTCACCGTTGTTCGGCCGA +TGAAATGCATATGCATAACATCGTCTTTGGTGGTTCCCCTCATCAGTGGCTCTATCTGAA +CGCGCTCTCCACTGCTTAATGACATTCCTTTCCCGATTAAAAAATCTGTCAGATCGGATG +TGGTCGGCCCGAAAACAGTTCTGGCAAAACCAATGGTGTCGCCTTCAACAAACAAAAAAG +ATGGGAATCCCAATGATTCGTCATCTGCGAGGCTGTTCTTAATATCTTCAACTGAAGCTT +TAGAGCGATTTATCTTCTGAACCAGACTCTTGTCATTTGTTTTGGTAAAGAGAAAAGTTT +TTCCATCGATTTTATGAATATACAAATAATTGGAGCCAACCTGCAGGTGATGATTATCAG +CCAGCAGAGAATTAAGGAAAACAGACAGGTTTATTGAGCGCTTATCTTTCCCTTTATTTT +TGCTGCGGTAAGTCGCATAAAAACCATTCTTCATAATTCAATCCATTTACTATGTTATGT +TCTGAGGGGAGTGAAAATTCCCCTAATTCGATGAAGATTCTTGCTCAATTGTTATCAGCT +ATGCGCCGACCAGAACACCTTGCCGATCAGCCAAACGTCTCTTCAGGCCACTGACTAGCG +ATAACTTTCCCCACAACGGAACAACTCTCATTGCATGGGATCATTGGGTACTGTGGGTTT +AGTGGTTGTAAAAACACCTGACCGCTATCCCTGATCAGTTTCTTGAAGGTAAACTCATCA +CCCCCAAGTCTGGCTATGCAGAAATCACCTGGCTCAACAGCCTGCTCAGGGTCAACGAGA +ATTAACATTCCGTCAGGAAAGCTTGGCTTGGAGCCTGTTGGTGCGGTCATGGAATTACCT +TCAACCTCAAGCCAGAATGCAGAATCACTGGCTTTTTTGGTTGTGCTTACCCATCTCTCC +GCATCACCTTTGGTAAAGGTTCTAAGCTCAGGTGAGAACATCCCTGCCTGAACATGAGAA +AAAACAGGGTACTCATACTCACTTCTAAGTGACGGCTGCATACTAACCGCTTCATACATC +TCGTAGATTTCTCTGGCGATTGAAGGGCTAAATTCTTCAACGCTAACTTTGAGAATTTTT +GCAAGCAATGCGGCGTTATAAGCATTTAATGCATTGATGCCATTAAATAAAGCACCAACG +CCTGACTGCCCCATCCCCATCTTGTCTGCGACAGATTCCTGGGATAAGCCAAGTTCATTT +TTCTTTTTTTCATAAATTGCTTTAAGGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAAT +GGTTTCTTTTTTGTGCTCATACGTTAAATCTATCACCGCAAGGGATAAATATCTAACACC +GTGCGTGTTGACTATTTTACCTCTGGCGGTGATAATGGTTGCATGTACTAAGGAGGTTGT +ATGGAACAACGCATAACCCTGAAAGATTATGCAATGCGCTTTGGGCAAACCAAGACAGCT +AAAGATCTCGGCGTATATCAAAGCGCGATCAACAAGGCCATTCATGCAGGCCGAAAGATT +TTTTTAACTATAAACGCTGATGGAAGCGTTTATGCGGAAGAGGTAAAGCCCTTCCCGAGT +AACAAAAAAACAACAGCATAAATAACCCCGCTCTTACACATTCCAGCCCTGAAAAAGGGC +ATCAAATTAAACCACACCTATGGTGTATGCATTTATTTGCATACATTCAATCAATTGTTA +TCTAAGGAAATACTTACATATGGTTCGTGCAAACAAACGCAACGAGGCTCTACGAATCGA +GAGTGCGTTGCTTAACAAAATCGCAATGCTTGGAACTGAGAAGACAGCGGAAGCTGTGGG +CGTTGATAAGTCGCAGATCAGCAGGTGGAAGAGGGACTGGATTCCAAAGTTCTCAATGCT +GCTTGCTGTTCTTGAATGGGGGGTCGTTGACGACGACATGGCTCGATTGGCGCGACAAGT +TGCTGCGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA +GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCATTATGACAAATACAGCA +AAAATACTCAACTTCGGCAGAGGTAACTTTGCCGGACAGGAGCGTAATGTGGCAGATCTC +GATGATGGTTACGCCAGACTATCAAATATGCTGCTTGAGGCTTATTCGGGCGCAGATCTG +ACCAAGCGACAGTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTGGAATAAA +CCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCTGTCAAACGG +TGCAATGAAGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGGCGGCATG +TTTGGACCAAATAAAAACATCTCAGAATGGTGCATCCCTCAAAACGAGGGAAAATCCCCT +AAAACGAGGGATAAAACATCCCTCAAATTGGGGGATTGCTATCCCTCAAAACAGGGGGAC +ACAAAAGACACTATTACAAAAGAAAAAAGAAAAGATTATTCGTCAGAGAATTCTGGCGAA +TCCTCTGACCAGCCAGAAAACGACCTTTCTGTGGTGAAACCGGATGCTGCAATTCAGAGC +GGCAGCAAGTGGGGGACAGCAGAAGACCTGACCGCCGCAGAGTGGATGTTTGACATGGTG +AAGACTATCGCACCATCAGCCAGAAAACCGAATTTTGCTGGGTGGGCTAACGATATCCGC +CTGATGCGTGAACGTGACGGACGTAACCACCGCGACATGTGTGTGCTGTTCCGCTGGGCA +TGCCAGGACAACTTCTGGTCCGGTAACGTGCTGAGCCCGGCCAAACTCCGCGATAAGTGG +ACCCAACTCGAAATCAACCGTAACAAGCAACAGGCAGGCGTGACAGCCAGCAAACCAAAA +CTCGACCTGACAAACACAGACTGGATTTACGGGGTGGATCTATGAAAAACATCGCCGCAC +AGATGGTTAACTTTGACCGTGAGCAGATGCGTCGGATCGCCAACAACATGCCGGAACAGT +ACGACGAAAAGCCGCAGGTACAGCAGGTAGCGCAGATCATCAACGGTGTGTTCAGCCAGT +TACTGGCAACTTTCCCGGCGAGCCTGGCTAACCGTGACCAGAACGAAGTGAACGAAATCC +GTCGCCAGTGGGTTCTGGCTTTTCGGGAAAACGGGATCACCACGATGGAACAGGTTAACG +CAGGAATGCGCGTAGCCCGTCGGCAGAATCGACCATTTCTGCCATCACCCGGGCAGTTTG +TTGCATGGTGCCGGGAAGAAGCATCCGTTACCGCCGGACTGCCAAACGTCAGCGAGCTGG +TTGATATGGTTTACGAGTATTGCCGGAAGCGAGGCCTGTATCCGGATGCGGAGTCTTATC +CGTGGAAATCAAACGCGCACTACTGGCTGGTTACCAACCTGTATCAGAACATGCGGGCCA +ATGCGCTTACTGATGCGGAATTACGCCGTAAGGCCGCAGATGAGCTTGTCCATATGACTG +CGAGAATTAACCGTGGTGAGGCGATCCCTGAACCAGTAAAACAACTTCCTGTCATGGGCG +GTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATCAAAGCTAAGTTCG +GACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCA +TAATAGCTTCTGTGCGCCGGACGTTGCCGCGCTAACAGGCGCAACAGTAACCAGCATAAA +TCAGGCCGCGGCTAAAATGGCACGGGCAGGTCTTCTGGTTATCGAAGGTAAGGTCTGGCG +AACGGTGTATTACCGGTTTGCTACCAGGGAAGAACGGGAAGGAAAGATGAGCACGAACCT +GGTTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGGCGGTATATGGAGT +TAAAAGATGACCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTT +TTTATTTGGGGGAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCAC +ATCAGCAAAACGCTATTCACGCAGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCG +TAGTAACCATTCAGGAACGCAACCGCAGCTTAGACCAAAACAGGAAGCTATGGGCCTGCT +TAGGTGACGTCTCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGA +AGTGTGTGTTTACCGCAGCATTAAAGCAGCAGGATGTTGTTCCTAACCTTGCCGGGAATG +GCTTTGTGGTAATAGGCCAGTCAACCAGCAGGATGCGTGTAGGCGAATTTGCGGAGCTAT +TAGAGCTTATACAGGCATTCGGTACAGAGCGTGGCGTTAAGTGGTCAGACGAAGCGAGAC +TGGCTCTGGAGTGGAAAGCGAGATGGGGAGACAGGGCTGCATGATAAATGTCGTTAGTTT +CTCCGGTGGCAGGACGTCAGCATATTTGCTCTGGCTAATGGAGCAAAAGCGACGGGCAGG +TAAAGACGTGCATTACGTTTTCATGGATACAGGTTGTGAACATCCAATGACATATCGGTT +TGTCAGGGAAGTTGTGAAGTTCTGGGATATACCGCTCACCGTATTGCAGGTTGATATCAA +CCCGGAGCTTGGACAGCCAAATGGTTATACGGTATGGGAACCAAAGGATATTCAGACGCG +AATGCCTGTTCTGAAGCCATTTATCGATATGGTAAAGAAATATGGCACTCCATACGTCGG +CGGCGCGTTCTGCACTGACAGATTAAAACTCGTTCCCTTCACCAAATACTGTGATGACCA +TTTCGGGCGAGGGAATTACACCACGTGGATTGGCATCAGAGCTGATGAACCGAAGCGGCT +AAAGCCAAAGCCTGGAATCAGATATCTTGCTGAACTGTCAGACTTTGAGAAGGAAGATAT +CCTCGCATGGTGGAAGCAACAACCATTCGATTTGCAAATACCGGAACATCTCGGTAACTG +CATATTCTGCATTAAAAAATCAACGCAAAAAATCGGACTTGCCTGCAAAGATGAGGAGGG +ATTGCAGCGTGTTTTTAATGAGGTCATCACGGGATCCCATGTGCGTGACGGACATCGGGA +AACGCCAAAGGAGATTATGTACCGAGGAAGAATGTCGCTGGACGGTATCGCGAAAATGTA +TTCAGAAAATGATTATCAAGCCCTGTATCAGGACATGGTACGAGCTAAAAGATTCGATAC +CGGCTCTTGTTCTGAGTCATGCGAAATATTTGGAGGGCAGCTTGATTTCGACTTCGGGAG +GGAAGCTGCATGATGCGATGTTATCGGTGCGGTGAATGCAAAGAAGATAACCGCTTCCGA +CCAAATCAACCTTACTGGAATCGATGGTGTCTCCGGTGTGAAAGAACACCAACAGGGGTG +TTACCACTACCGCAGGAAAAGGAGGACGTGTGGCGAGACAGCGACGAAGTATCACCGACA +TAATCTGCGAAAACTGCAAATACCTTCCAACGAAACGCACCAGAAATAAACCCAAGCCAA +TCCCAAAAGAATCTGACGTAAAAACCTTCAACTACACGGCTCACCTGTGGGATATCCGGT +GGCTAAGACGTCGTGCGAGGAAAACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGA +AAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGT +TCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGCACGA +GGAAGAAGATGATGGCTAAACCAGCGCGAAGACGATGTAAAAACGATGAATGCCGGGAAT +GGTTTCACCCTGCATTCGCTAATCAGTGGTGGTGCTCTCCAGAGTGTGGAACCAAGATAG +CACTCGAACGACGAAGTAAAGAACGCGAAAAAGCGGAAAAAGCAGCAGAGAAGAAACGAC +GACGAGAGGAGCAGAAACAGAAAGATAAACTTAAGATTCGAAAACTCGCCTTAAAGCCCC +GCAGTTACTGGATTAAACAAGCCCAACAAGCCGTAAACGCCTTCATCAGAGAAAGAGACC +GCGACTTACCATGTATCTCGTGCGGAACGCTCACGTCTGCTCAGTGGGATGCCGGACATT +ACCGGACAACTGCTGCGGCACCTCAACTCCGATTTAATGAACGCAATATTCACAAGCAAT +GCGTGGTGTGCAACCAGCACAAAAGCGGAAATCTCGTTCCGTATCGCGTCGAACTGATTA +GCCGCATCGGGCAGGAAGCAGTAGACGAAATCGAATCAAACCATAACCGCCATCGCTGGA +CTATCGAAGAGTGCAAGGCGATCAAGGCAGAGTACCAACAGAAACTCAAAGACCTGCGAA +ATAGCAGAAGTGAGGCCGCATGACGTTCTCAGTAAAAACCATTCCAGACATGCTCGTTGA +AGCATACGGAAATCAGACAGAAGTAGCACGCAGACTGAAATGTAGTCGCGGTACGGTCAG +AAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACGACGTTCTCATGGT +TCATCGCGGATGGAGTGAAAGAGATGCGCTATTACGAAAAAATTGATGGCAGCAAATACC +GAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGAACCTGATGAACAAACTGG +ATACGATTGGATTCGACAACAAAAAAGACCTGCTTATCTCGGTGGGCGATTTGGTTGATC +GTGGTGCAGAGAACGTTGAATGCCTGGAATTAATCACATTCCCCTGGTTCAGAGCTGTAC +GTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGCGTGGAAACGTTAATCACT +GGCTGCTTAATGGCGGTGGCTGGTTCTTTAATCTCGATTACGACAAAGAAATTCTGGCTA +AAGCTCTTGCCCATAAAGCAGATGAACTTCCGTTAATCATCGAACTGGTGAGCAAAGATA +AAAAATATGTTATCTGCCACGCCGATTATCCCTTTGACGAATACGAGTTTGGAAAGCCAG +TTGATCATCAGCAGGTAATCTGGAACCGCGAACGAATCAGCAACTCACAAAACGGGATCG +TGAAAGAAATCAAAGGCGCGGACACGTTCATCTTTGGTCATACGCCAGCAGTGAAACCAC +TCAAGTTTGCCAACCAAATGTATATCGATACCGGCGCAGTGTTCTGCGGAAACCTAACAT +TGATTCAGGTACAGGGAGAAGGCGCATGAGACTCGAAAGCGTAGCTAAATTTCATTCGCC +AAAAAGCCCGATGATGAGCGACTCACCACGGGCCACGGCTTCTGACTCTCTTTCCGGTAC +TGATGTGATGGCTGCTATGGGGATGGCGCAATCACAAGCCGGATTCGGTATGGCTGCATT +CTGCGGTAAGCACGAACTCAGCCAGAACGACAAACAAAAGGCTATCAACTATCTGATGCA +ATTTGCACACAAGGTATCGGGGAAATACCGTGGTGTGGCAAAGCTTGAAGGAAATACTAA +GGCAAAGGTACTGCAAGTGCTCGCAACATTCGCTTATGCGGATTATTGCCGTAGTGCCGC +GACGCCGGGGGCAAGATGCAGAGATTGCCATGGTACAGGCCGTGCGGTTGATATTGCCAA +AACAGAGCTGTGGGGGAGAGTTGTCGAGAAAGAGTGCGGAAGATGCAAAGGCGTCGGCTA +TTCAAGGATGCCAGCAAGCGCAGCATATCGCGCTGTGACGATGCTAATCCCAAACCTTAC +CCAACCCACCTGGTCACGCACTGTTAAGCCGCTGTATGACGCTCTGGTGGTGCAATGCCA +CAAAGAAGAGTCAATCGCAGACAACATTTTGAATGCGGTCACACGTTAGCAGCATGATTG +CCACGGATGGCAACATATTAACGGCATGATATTGACTTATTGAATAAAATTGGGTAAATT +TGACTCAACGATGGGTTAATTCGCTCGTTGTGGTAGTGAGATGAAAAGAGGCGGCGCTTA +CTACCGATTCCGCCTAGTTGGTCACTTCGACGTATCGTCTGGAACTCCAACCATCGCAGG +CAGAGAGGTCTGCAAAATGCAATCCCGAAACAGTTCGCAGGTAATAGTTAGAGCCTGCAT +AACGGTTTCGGGATTTTTTATATCTGCACAACAGGTAAGAGCATTGAGTCGATAATCGTG +AAGAGTCGGCGAGCCTGGTTAGCCAGTGCTCTTTCCGTTGTGCTGAATTAAGCGAATACC +GGAAGCAGAACCGGATCACCAAATGCGTACAGGCGTCATCGCCGCCCAGCAACAGCACAA +CCCAAACTGAGCCGTAGCCACTGTCTGTCCTGAATTCATTAGTAATAGTTACGCTGCGGC +CTTTTACACATGACCTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCC +GTTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATT +TGTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGT +AAGACATGAAGATGCCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAAC +AAGGCATCGGGGCAATCCTTGCGTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCG +GTGCGTTTACAAAAACAGTAATCGACGCAACGATGTGCGCCATTATCGCCTGGTTCATTC +GTGACCTTCTCGACTTCGCCGGACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTA +TCGGCTACATCGGTACTGACTCGATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAG +CCGGAGTAGAAGATGGTAGAAATCAATAATCAACGTAAGGCGTTCCTCGATATGCTGGCG +TGGTCGGAGGGAACTGATAACGGACGTCAGAAAACCAGAAATCATGGTTATGACGTCATT +GTAGGCGGAGAGCTATTTACTGATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAAC +CCAAAACTCAAATCAACAGGCGCCGGACGCTACCAGCTTCTTTCCCGTTGGTGGGATGCC +TACCGCAAGCAGCTTGGCCTGAAAGACTTCTCTCCGAAAAGTCAGGACGCTGTGGCATTG +CAGCAGATTAAGGAGCGTGGCGCTTTACCTATGATTGATCGTGGTGATATCCGTCAGGCA +ATCGACCGTTGCAGCAATATCTGGGCTTCACTGCCGGGCGCTGGTTATGGTCAGTTCGAG +CATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAAGCGGGCGGAACGGTCAGAGAGATT +GATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCC +TGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACA +AAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGC +GTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGCTGAAA +ATGATGCTCTGCGTGATGATGTTGCCGCTGGTCGTCGTCGGTTGCACATCAAAGCAGTCT +GTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGAC +TGGCAGACACCGCTGAACGGGATTATTTCACCCTCAGAGAGAGGCTGATCACTATGCAAA +AACAACTGGAAGGAACCCAGAAGTATATTAATGAGCAGTGCAGATAGAGTTGCCCATATC +GATGGGCAACTCATGCAATTATTGTGAGCAATACACACGCGCTTCCAGCGGAGTATAAAT +GCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAAC +AACATTTTCTGCGCCGCCACAAATTTTGGCTGCATCGACAGTTTTCTTCTGCCCAATTCC +AGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTG +AACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAG +CATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGA +AAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTA +TGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGG +GGAACTTCTCTGCGGGAGTGTCCGGGAATAATTAAAACGATGCACACAGGGTTTAGCGCG +TACACGTATTGCATTATGCCAACGCCCCGGTGCTGACACGGAAGAAACCGGACGTTATGA +TTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTAT +CAAAGGTATAGTAATATCTTTTATGTTCATGGATATTTGTAACCCATCGGAAAACTCCTG +CTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCAT +AGGACGTTTCTATAAGATGCGTGTTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTC +CTTTTATTAACACGGTGTTATCGTTTTCTAACACGATGTGAATATTATCTGTGGCTAGAT +AGTAAATATAATGTGAGACGTTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTCTA +AATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAA +CCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGT +CTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAAT +AGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGAC +AGATGTATGTAAGGCCAACGTGCTCAAATCTTCATACAGAAAGATTTGAAGTAATATTTT +AACCGCTAGATGAAGAGCAAGCGCATGGAGCGACAAAATGAATAAAGAACAATCTGCTGA +TGATCCCTCCGTGGATCTGATTCGTGTAAAAAATATGCTTAATAGCACCATTTCTATGAG +TTACCCTGATGTTGTAATTGCATGTATAGAACATAAGGTGTCTCTGGAAGCATTCAGAGC +AATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGA +CTGATCACCATAACTGCTAATCATTCAAACTATTTAGTCTGTGACAGAGCCAACACGCAG +TCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGCCCTCGTAATT +AAGTGAATTTACAATATCGTCCTGTTCGGAGGGAAGAACGCGGGATGTTCATTCTTCATC +ACTTTTAATTGATGTATATGCTCTCTTTTCTGACGTTAGTCTCCGACGGCAGGCTTCAAT +GACCCAGGCTGAGAAATTCCCGGACCCTTTTTGCTCAAGAGCGATGTTAATTTGTTCAAT +CATTTGGTTAGGAAAGCGGATGTTGCGGGTTGTTGTTCTGCGGGTTCTGTTCTTCGTTGA +CATGAGGTTGCCCCGTATTCAGTGTCGCTGATTTGTATTGTCTGAAGTTGTTTTTACGTT +AAGTTGATGCAGATCAATTAATACGATACCTGCGTCATAATTGATTATTTGACGTGGTTT +GATGGCCTCCACGCACGTTGTGATATGTAGATGATAATCATTATCACTTTACGGGTCCTT +TCCGGTGATCCGACAGGTTACG diff -r 000000000000 -r 6a4d1bd8ac1d cpt_annotation_table/test-data/NC_001416_Table_In.gff3 --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cpt_annotation_table/test-data/NC_001416_Table_In.gff3 Fri Jun 17 12:19:58 2022 +0000 @@ -0,0 +1,476 @@ +##gff-version 3 +##sequence-region NC_001416.1_phage_lambda 1 48502 +NC_001416.1_phage_lambda . gene 14261 14875 . + . owner=jolenerr@tamu.edu;ID=cdb58372-2440-4e07-bcc4-739e0aba461f;date_last_modified=2020-05-27;Name=tail tip assembly protein K;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 14261 14875 . + . owner=jolenerr@tamu.edu;Parent=cdb58372-2440-4e07-bcc4-739e0aba461f;ID=c53587ff-12d9-4a3a-a7ac-e87e54c5232b;date_last_modified=2020-05-27;Name=tail tip assembly protein K;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 14276 14875 . + 0 Parent=c53587ff-12d9-4a3a-a7ac-e87e54c5232b;ID=2d4171c3-93b5-4c30-afba-9a0969dd4a6f;Name=2d4171c3-93b5-4c30-afba-9a0969dd4a6f +NC_001416.1_phage_lambda . exon 14276 14875 . + . Parent=c53587ff-12d9-4a3a-a7ac-e87e54c5232b;ID=782a319b-3988-4cb2-aedf-47242382005c;Name=782a319b-3988-4cb2-aedf-47242382005c +NC_001416.1_phage_lambda . exon 14261 14265 . + . Parent=c53587ff-12d9-4a3a-a7ac-e87e54c5232b;ID=709a9728-db34-4010-bfc3-41b0687edb80;Name=709a9728-db34-4010-bfc3-41b0687edb80 +### +NC_001416.1_phage_lambda . gene 47727 47944 . + . owner=jolenerr@tamu.edu;ID=e3d29177-18a8-4bc0-8d91-15e5760f3bd3;date_last_modified=2020-05-13;Name=NC_001416.1_phage_lambda.gene_60;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 47727 47944 . + . owner=jolenerr@tamu.edu;Parent=e3d29177-18a8-4bc0-8d91-15e5760f3bd3;ID=90e550aa-f463-46d2-bec4-87aa38e63ee2;date_last_modified=2020-05-13;Name=NC_001416.1_phage_lambda.gene_60-00001;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 47738 47944 . + 0 Parent=90e550aa-f463-46d2-bec4-87aa38e63ee2;ID=586909d5-f3a6-44bb-8e9e-5a5230b2127a;Name=586909d5-f3a6-44bb-8e9e-5a5230b2127a +NC_001416.1_phage_lambda . exon 47727 47730 . + . Parent=90e550aa-f463-46d2-bec4-87aa38e63ee2;ID=bf5e1837-0469-4372-9652-7677fee29843;Name=bf5e1837-0469-4372-9652-7677fee29843 +NC_001416.1_phage_lambda . exon 47738 47944 . + . Parent=90e550aa-f463-46d2-bec4-87aa38e63ee2;ID=14232a86-ebfe-4f10-aa28-2910207542f7;Name=14232a86-ebfe-4f10-aa28-2910207542f7 +### +NC_001416.1_phage_lambda . gene 13416 14127 . + . owner=jolenerr@tamu.edu;ID=11a10b01-003c-4900-aae9-46139ae23652;date_last_modified=2020-05-27;Name=tail tip protein L;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 13416 14127 . + . owner=jolenerr@tamu.edu;Parent=11a10b01-003c-4900-aae9-46139ae23652;ID=07cc76d7-d0f4-447f-a851-3aeaee1b71ac;date_last_modified=2020-05-27;Name=tail tip protein L;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 13429 14127 . + 0 Parent=07cc76d7-d0f4-447f-a851-3aeaee1b71ac;ID=37a2e1ad-d49c-43d3-b33b-727c848e2a38;Name=37a2e1ad-d49c-43d3-b33b-727c848e2a38 +NC_001416.1_phage_lambda . exon 13429 14127 . + . Parent=07cc76d7-d0f4-447f-a851-3aeaee1b71ac;ID=008fa66b-e5b3-489b-8d99-208103afde8f;Name=008fa66b-e5b3-489b-8d99-208103afde8f +NC_001416.1_phage_lambda . exon 13416 13419 . + . Parent=07cc76d7-d0f4-447f-a851-3aeaee1b71ac;ID=0a4ad3d9-21dc-4fab-badb-a94e4493c397;Name=0a4ad3d9-21dc-4fab-badb-a94e4493c397 +### +NC_001416.1_phage_lambda . gene 19641 20855 . + . owner=jolenerr@tamu.edu;ID=e7267f7d-4717-4e28-a1a0-564b10661248;date_last_modified=2020-05-27;Name=tail fiber protein stf;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 19641 20855 . + . owner=jolenerr@tamu.edu;Parent=e7267f7d-4717-4e28-a1a0-564b10661248;ID=b7a5dc48-88c5-4edc-9081-091ef39ff3ea;date_last_modified=2020-05-27;Name=tail fiber protein stf;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 19641 19644 . + . Parent=b7a5dc48-88c5-4edc-9081-091ef39ff3ea;ID=e794f054-733e-4b10-99df-128b37cd80e8;Name=e794f054-733e-4b10-99df-128b37cd80e8 +NC_001416.1_phage_lambda . CDS 19650 20855 . + 0 Parent=b7a5dc48-88c5-4edc-9081-091ef39ff3ea;ID=f1584714-9cc6-4209-8730-0d7c199cff35;Name=f1584714-9cc6-4209-8730-0d7c199cff35 +NC_001416.1_phage_lambda . exon 19650 20855 . + . Parent=b7a5dc48-88c5-4edc-9081-091ef39ff3ea;ID=b44a883e-e4e2-4432-b665-355a803943dc;Name=b44a883e-e4e2-4432-b665-355a803943dc +### +NC_001416.1_phage_lambda . gene 45953 46427 . + . owner=jolenerr@tamu.edu;ID=4795342c-7959-44d9-925a-781f17371e7a;date_last_modified=2020-05-13;Name=i-spanin Rz;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 45953 46427 . + . owner=jolenerr@tamu.edu;Parent=4795342c-7959-44d9-925a-781f17371e7a;ID=e23ef28c-7a93-4167-a654-fbae4011762c;date_last_modified=2020-05-13;Name=i-spanin Rz;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 45966 46427 . + . Parent=e23ef28c-7a93-4167-a654-fbae4011762c;ID=4b15c521-70e8-47fb-8bda-112fa73dd79b;Name=4b15c521-70e8-47fb-8bda-112fa73dd79b +NC_001416.1_phage_lambda . exon 45953 45955 . + . Parent=e23ef28c-7a93-4167-a654-fbae4011762c;ID=aa58c9ad-faf2-4aad-a5ff-cbf537054bd4;Name=aa58c9ad-faf2-4aad-a5ff-cbf537054bd4 +NC_001416.1_phage_lambda . CDS 45966 46427 . + 0 Parent=e23ef28c-7a93-4167-a654-fbae4011762c;ID=e3a9ad11-4408-46f9-944d-48720e656fa8;Name=e3a9ad11-4408-46f9-944d-48720e656fa8 +### +NC_001416.1_phage_lambda . gene 41048 41953 . + . owner=jolenerr@tamu.edu;ID=ccb0da66-e8f2-46c6-b6ce-f3d2fcbdea5e;date_last_modified=2020-05-13;Name=NC_001416.1_phage_lambda.orf00086;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 41048 41953 . + . owner=jolenerr@tamu.edu;Parent=ccb0da66-e8f2-46c6-b6ce-f3d2fcbdea5e;ID=6b16d5ca-3a30-4f62-a281-c435015ba769;date_last_modified=2020-05-13;Name=NC_001416.1_phage_lambda.orf00086-00001;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 41063 41953 . + 0 Parent=6b16d5ca-3a30-4f62-a281-c435015ba769;ID=53110d0e-b12f-4938-8ebb-20ee6bde4f36;Name=53110d0e-b12f-4938-8ebb-20ee6bde4f36 +NC_001416.1_phage_lambda . exon 41048 41051 . + . Parent=6b16d5ca-3a30-4f62-a281-c435015ba769;ID=44dc4a7f-693f-44a4-b080-efd0bf3bd124;Name=44dc4a7f-693f-44a4-b080-efd0bf3bd124 +NC_001416.1_phage_lambda . exon 41063 41953 . + . Parent=6b16d5ca-3a30-4f62-a281-c435015ba769;ID=17e07310-76b7-4576-a57a-a56231971d0c;Name=17e07310-76b7-4576-a57a-a56231971d0c +### +NC_001416.1_phage_lambda . gene 31005 31206 . - . owner=jolenerr@tamu.edu;Note=Contains InterPro domain IPR009814 with DUF1382;ID=97f8a88b-c50d-4710-9ae1-a8dad5ccc83f;date_last_modified=2020-05-27;Name=hypothetical protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 31005 31206 . - . owner=jolenerr@tamu.edu;Parent=97f8a88b-c50d-4710-9ae1-a8dad5ccc83f;ID=6f149b28-c6ce-4f8a-a842-8d537e5f1478;date_last_modified=2020-05-27;Name=hypothetical protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 31005 31196 . - 0 Parent=6f149b28-c6ce-4f8a-a842-8d537e5f1478;ID=dbffb4e7-553d-4b4b-a70a-8ca19028460e;Name=dbffb4e7-553d-4b4b-a70a-8ca19028460e +NC_001416.1_phage_lambda . exon 31005 31196 . - . Parent=6f149b28-c6ce-4f8a-a842-8d537e5f1478;ID=ef660edf-ce1f-4e4c-9a0f-217603922f0d;Name=ef660edf-ce1f-4e4c-9a0f-217603922f0d +NC_001416.1_phage_lambda . exon 31203 31206 . - . Parent=6f149b28-c6ce-4f8a-a842-8d537e5f1478;ID=a1e20567-150b-4181-91ea-783f4155a4ce;Name=a1e20567-150b-4181-91ea-783f4155a4ce +### +NC_001416.1_phage_lambda . gene 48109 48314 . - . owner=jolenerr@tamu.edu;ID=e0b009e4-729e-4d97-b818-ec0cbebcb1f4;date_last_modified=2020-05-13;Name=NC_001416.1_phage_lambda.orf00102;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 48109 48314 . - . owner=jolenerr@tamu.edu;Parent=e0b009e4-729e-4d97-b818-ec0cbebcb1f4;ID=0d475cfd-bd5b-4424-bb5c-6ba213b99053;date_last_modified=2021-12-20;Name=NC_001416.1_phage_lambda.orf00102;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 48109 48303 . - . Parent=0d475cfd-bd5b-4424-bb5c-6ba213b99053;ID=9c532b82-37ea-405c-b264-bb9921e0da28;Name=9c532b82-37ea-405c-b264-bb9921e0da28 +NC_001416.1_phage_lambda . CDS 48109 48303 . - 0 Parent=0d475cfd-bd5b-4424-bb5c-6ba213b99053;ID=811c5704-9880-4251-9607-9495f0918830;Name=811c5704-9880-4251-9607-9495f0918830 +NC_001416.1_phage_lambda . exon 48311 48314 . - . Parent=0d475cfd-bd5b-4424-bb5c-6ba213b99053;ID=d6c66134-9b46-4cfd-bbdf-6832718a2f68;Name=d6c66134-9b46-4cfd-bbdf-6832718a2f68 +### +NC_001416.1_phage_lambda . gene 31169 31365 . - . owner=jolenerr@tamu.edu;Note=Contains InterPro domain IPR009750 DUF1317;ID=2cc7e0fe-b058-4773-ab3d-e94e32ff3c69;date_last_modified=2020-05-27;Name=hypothetical protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 31169 31365 . - . owner=jolenerr@tamu.edu;Parent=2cc7e0fe-b058-4773-ab3d-e94e32ff3c69;ID=4e1ee30d-2a4a-4832-a6ec-6429d877de0f;date_last_modified=2020-05-27;Name=hypothetical protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 31169 31357 . - 0 Parent=4e1ee30d-2a4a-4832-a6ec-6429d877de0f;ID=a4824d23-f1f7-4bb3-850d-456302c0cd3e;Name=a4824d23-f1f7-4bb3-850d-456302c0cd3e +NC_001416.1_phage_lambda . exon 31169 31357 . - . Parent=4e1ee30d-2a4a-4832-a6ec-6429d877de0f;ID=f21e1ef1-ed44-4edf-ba42-389aaac4eb1b;Name=f21e1ef1-ed44-4edf-ba42-389aaac4eb1b +NC_001416.1_phage_lambda . exon 31363 31365 . - . Parent=4e1ee30d-2a4a-4832-a6ec-6429d877de0f;ID=b055fa58-56b5-4a97-99ae-61b066b2e1d6;Name=b055fa58-56b5-4a97-99ae-61b066b2e1d6 +### +NC_001416.1_phage_lambda . gene 4406 5737 . + . owner=jolenerr@tamu.edu;ID=422aab41-ac49-4818-b87e-9331023dcacf;date_last_modified=2020-05-27;Name=capsid assembly protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 5023 5737 . + . owner=jolenerr@tamu.edu;Parent=422aab41-ac49-4818-b87e-9331023dcacf;ID=2c7d9e50-178a-4b77-8cfa-ea15dffbf2fc;date_last_modified=2020-05-27;Name=capsid assembly protein;date_creation=2020-05-27 +NC_001416.1_phage_lambda . exon 5036 5737 . + . Parent=2c7d9e50-178a-4b77-8cfa-ea15dffbf2fc;ID=9aa67988-0a1b-48f8-8ccc-73cbdc46fca1;Name=9aa67988-0a1b-48f8-8ccc-73cbdc46fca1 +NC_001416.1_phage_lambda . exon 5023 5026 . + . Parent=2c7d9e50-178a-4b77-8cfa-ea15dffbf2fc;ID=fe02a19f-d8fb-4fde-aefe-a1dc1fa7fd42;Name=fe02a19f-d8fb-4fde-aefe-a1dc1fa7fd42 +NC_001416.1_phage_lambda . CDS 5036 5737 . + 0 Parent=2c7d9e50-178a-4b77-8cfa-ea15dffbf2fc;ID=dc79c662-414a-45ff-9be1-e1b1320771b5;Name=dc79c662-414a-45ff-9be1-e1b1320771b5 +NC_001416.1_phage_lambda . mRNA 4406 5737 . + . owner=jolenerr@tamu.edu;Parent=422aab41-ac49-4818-b87e-9331023dcacf;ID=db7af84b-f141-4d21-8855-58c4b0e2de87;date_last_modified=2020-05-27;Name=capsid assembly protease C;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 4406 4411 . + . Parent=db7af84b-f141-4d21-8855-58c4b0e2de87;ID=b9ee44dc-54e3-4808-8758-6420ddce8608;Name=b9ee44dc-54e3-4808-8758-6420ddce8608 +NC_001416.1_phage_lambda . CDS 4418 5737 . + 0 Parent=db7af84b-f141-4d21-8855-58c4b0e2de87;ID=f2387694-c049-4727-a5f5-4a1e8116007d;Name=f2387694-c049-4727-a5f5-4a1e8116007d +NC_001416.1_phage_lambda . exon 4418 5737 . + . Parent=db7af84b-f141-4d21-8855-58c4b0e2de87;ID=4ed5d996-6eec-4541-9cae-4489f57adab5;Name=4ed5d996-6eec-4541-9cae-4489f57adab5 +### +NC_001416.1_phage_lambda . gene 7968 8555 . + . owner=jolenerr@tamu.edu;ID=b541056e-bf91-4113-bce7-86bab4d27f76;date_last_modified=2020-05-27;Name=tail completion protein Z;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 7968 8555 . + . owner=jolenerr@tamu.edu;Parent=b541056e-bf91-4113-bce7-86bab4d27f76;ID=475d1f26-3c59-41fd-bdfa-09f42a91766b;date_last_modified=2020-05-27;Name=tail completion protein Z;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 7977 8555 . + . Parent=475d1f26-3c59-41fd-bdfa-09f42a91766b;ID=914541be-3506-4d06-9b08-6afec458c4eb;Name=914541be-3506-4d06-9b08-6afec458c4eb +NC_001416.1_phage_lambda . CDS 7977 8555 . + 0 Parent=475d1f26-3c59-41fd-bdfa-09f42a91766b;ID=87d278a9-95f1-49e8-a12c-0fe39a878c07;Name=87d278a9-95f1-49e8-a12c-0fe39a878c07 +NC_001416.1_phage_lambda . exon 7968 7971 . + . Parent=475d1f26-3c59-41fd-bdfa-09f42a91766b;ID=da005004-2e06-4ec4-9442-5c5c9022e944;Name=da005004-2e06-4ec4-9442-5c5c9022e944 +### +NC_001416.1_phage_lambda . gene 43135 43889 . + . owner=jolenerr@tamu.edu;ID=8ce6427a-594a-4320-955b-be6dd71ab223;date_last_modified=2020-05-13;Name=NC_001416.1_phage_lambda.gene_53;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 43212 43889 . + . owner=jolenerr@tamu.edu;Parent=8ce6427a-594a-4320-955b-be6dd71ab223;ID=fc735705-5848-4ad7-9015-b0920014760c;date_last_modified=2020-05-13;Name=NC_001416.1_phage_lambda.gene_53-00001;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 43224 43889 . + 0 Parent=fc735705-5848-4ad7-9015-b0920014760c;ID=c8a786e9-3ee5-4e0f-a249-04f38e7442f3;Name=c8a786e9-3ee5-4e0f-a249-04f38e7442f3 +NC_001416.1_phage_lambda . exon 43224 43889 . + . Parent=fc735705-5848-4ad7-9015-b0920014760c;ID=1f9f83da-c5a6-4e57-b8ca-32a3b012f862;Name=1f9f83da-c5a6-4e57-b8ca-32a3b012f862 +NC_001416.1_phage_lambda . exon 43212 43215 . + . Parent=fc735705-5848-4ad7-9015-b0920014760c;ID=9a79a6bf-4be1-467c-baed-d54b95b1cdce;Name=9a79a6bf-4be1-467c-baed-d54b95b1cdce +### +NC_001416.1_phage_lambda . gene 43032 43246 . + . owner=jolenerr@tamu.edu;ID=0cea2875-2757-4c9b-97f5-7b0ec545394a;date_last_modified=2020-05-13;Name=NC_001416.1_phage_lambda.gene_52;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 43032 43246 . + . owner=jolenerr@tamu.edu;Parent=0cea2875-2757-4c9b-97f5-7b0ec545394a;ID=eb6de75f-182b-409a-b0ed-1bdd8641186a;date_last_modified=2020-05-13;Name=NC_001416.1_phage_lambda.gene_52-00001;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 43040 43246 . + . Parent=eb6de75f-182b-409a-b0ed-1bdd8641186a;ID=830d2761-6b80-429c-9571-5331ab18e0da;Name=830d2761-6b80-429c-9571-5331ab18e0da +NC_001416.1_phage_lambda . exon 43032 43034 . + . Parent=eb6de75f-182b-409a-b0ed-1bdd8641186a;ID=a1fa76f5-0712-4fcd-9b04-e374f0870598;Name=a1fa76f5-0712-4fcd-9b04-e374f0870598 +NC_001416.1_phage_lambda . CDS 43040 43246 . + 0 Parent=eb6de75f-182b-409a-b0ed-1bdd8641186a;ID=a730aa32-fd56-49cd-826d-e754e3812cdb;Name=a730aa32-fd56-49cd-826d-e754e3812cdb +### +NC_001416.1_phage_lambda . gene 31348 32038 . - . owner=jolenerr@tamu.edu;ID=645d965c-2694-421e-8b95-d800a857c890;date_last_modified=2020-05-27;Name=exonuclease exo;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 31348 32038 . - . owner=jolenerr@tamu.edu;Parent=645d965c-2694-421e-8b95-d800a857c890;ID=fc7222c4-b683-4557-ad4f-ddd744c99c65;date_last_modified=2020-05-27;Name=exonuclease exo;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 31348 32028 . - 0 Parent=fc7222c4-b683-4557-ad4f-ddd744c99c65;ID=04ef47df-8b6c-4bf3-891b-8576e1819737;Name=04ef47df-8b6c-4bf3-891b-8576e1819737 +NC_001416.1_phage_lambda . exon 31348 32028 . - . Parent=fc7222c4-b683-4557-ad4f-ddd744c99c65;ID=1fc98cde-2b28-4bf3-affb-6a9303d5ad98;Name=1fc98cde-2b28-4bf3-affb-6a9303d5ad98 +NC_001416.1_phage_lambda . exon 32035 32038 . - . Parent=fc7222c4-b683-4557-ad4f-ddd744c99c65;ID=637638ea-4b0c-4299-b9db-4f6b540b8c93;Name=637638ea-4b0c-4299-b9db-4f6b540b8c93 +### +NC_001416.1_phage_lambda . gene 28860 29090 . - . owner=jolenerr@tamu.edu;ID=016016bc-f3b9-4c48-982e-b463960d3a59;date_last_modified=2020-05-27;Name=excisionase Xis;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 28860 29090 . - . owner=jolenerr@tamu.edu;Parent=016016bc-f3b9-4c48-982e-b463960d3a59;ID=b2a5d312-69c7-463a-b15a-b832bf08566b;date_last_modified=2020-05-27;Name=excisionase Xis;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 29087 29090 . - . Parent=b2a5d312-69c7-463a-b15a-b832bf08566b;ID=54e68471-9aeb-44d3-91ea-85bd5b737055;Name=54e68471-9aeb-44d3-91ea-85bd5b737055 +NC_001416.1_phage_lambda . exon 28860 29078 . - . Parent=b2a5d312-69c7-463a-b15a-b832bf08566b;ID=5f5c0bc7-17f9-4845-aeb4-040d76496884;Name=5f5c0bc7-17f9-4845-aeb4-040d76496884 +NC_001416.1_phage_lambda . CDS 28860 29078 . - 0 Parent=b2a5d312-69c7-463a-b15a-b832bf08566b;ID=4427c725-ba0d-4ced-8bb9-3f150766afbf;Name=4427c725-ba0d-4ced-8bb9-3f150766afbf +### +NC_001416.1_phage_lambda . gene 40628 41084 . + . owner=jolenerr@tamu.edu;ID=ef111958-2be7-4828-8442-c2c376692e6b;date_last_modified=2020-05-13;Name=NC_001416.1_phage_lambda.gene_49;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 40628 41084 . + . owner=jolenerr@tamu.edu;Parent=ef111958-2be7-4828-8442-c2c376692e6b;ID=91989480-9b86-4a62-adbb-4f5a44a0ec45;date_last_modified=2020-05-13;Name=NC_001416.1_phage_lambda.gene_49-00001;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 40644 41084 . + 0 Parent=91989480-9b86-4a62-adbb-4f5a44a0ec45;ID=751b73fd-c690-4444-ab99-b9333fcd9e2a;Name=751b73fd-c690-4444-ab99-b9333fcd9e2a +NC_001416.1_phage_lambda . exon 40628 40632 . + . Parent=91989480-9b86-4a62-adbb-4f5a44a0ec45;ID=0cdd7034-7c8f-41ba-9dbb-1bde690f9620;Name=0cdd7034-7c8f-41ba-9dbb-1bde690f9620 +NC_001416.1_phage_lambda . exon 40644 41084 . + . Parent=91989480-9b86-4a62-adbb-4f5a44a0ec45;ID=bb130cc5-09d6-4c8a-a4d4-2e09d361f874;Name=bb130cc5-09d6-4c8a-a4d4-2e09d361f874 +### +NC_001416.1_phage_lambda . gene 6099 7160 . + . owner=jolenerr@tamu.edu;ID=4f815f9e-5092-4db3-b722-0d912c116293;date_last_modified=2020-05-27;Name=major capsid protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 6099 7160 . + . owner=jolenerr@tamu.edu;Parent=4f815f9e-5092-4db3-b722-0d912c116293;ID=f7f8d414-558e-4fad-9402-2f4c644c3be6;date_last_modified=2020-05-27;Name=major capsid protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 6108 7160 . + . Parent=f7f8d414-558e-4fad-9402-2f4c644c3be6;ID=04e5dcec-c34b-470c-a2c3-d166d6c719f4;Name=04e5dcec-c34b-470c-a2c3-d166d6c719f4 +NC_001416.1_phage_lambda . exon 6099 6101 . + . Parent=f7f8d414-558e-4fad-9402-2f4c644c3be6;ID=bd03b34d-6d62-45cb-98fa-4f64b6539ee0;Name=bd03b34d-6d62-45cb-98fa-4f64b6539ee0 +NC_001416.1_phage_lambda . CDS 6108 7160 . + 0 Parent=f7f8d414-558e-4fad-9402-2f4c644c3be6;ID=f3e04569-52b1-4a8c-8fca-d1ec2c4e184b;Name=f3e04569-52b1-4a8c-8fca-d1ec2c4e184b +### +NC_001416.1_phage_lambda . gene 33187 33344 . - . owner=jolenerr@tamu.edu;ID=dedaa85a-5d65-4faf-a809-97c9a0ca52a8;date_last_modified=2020-05-27;Name=host-killing protein kil;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 33187 33344 . - . owner=jolenerr@tamu.edu;Parent=dedaa85a-5d65-4faf-a809-97c9a0ca52a8;ID=f20645d1-d2a4-4b3f-b436-4b01b68e73e1;date_last_modified=2020-05-27;Name=host-killing protein kil;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 33340 33344 . - . Parent=f20645d1-d2a4-4b3f-b436-4b01b68e73e1;ID=2e7b6a7a-b4d3-4e89-9c4a-072432ff7dd7;Name=2e7b6a7a-b4d3-4e89-9c4a-072432ff7dd7 +NC_001416.1_phage_lambda . CDS 33187 33330 . - 0 Parent=f20645d1-d2a4-4b3f-b436-4b01b68e73e1;ID=0340b6aa-b09a-4551-a1b5-605336ec0aff;Name=0340b6aa-b09a-4551-a1b5-605336ec0aff +NC_001416.1_phage_lambda . exon 33187 33330 . - . Parent=f20645d1-d2a4-4b3f-b436-4b01b68e73e1;ID=928bfa37-5054-4748-9243-82f6478505ad;Name=928bfa37-5054-4748-9243-82f6478505ad +### +NC_001416.1_phage_lambda . gene 42080 42272 . + . owner=jolenerr@tamu.edu;ID=61a0d8bd-5b58-4077-bc04-2bcf4dee8939;date_last_modified=2020-05-13;Name=CDS.0.2486_0.0832002363577;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 42080 42272 . + . owner=jolenerr@tamu.edu;Parent=61a0d8bd-5b58-4077-bc04-2bcf4dee8939;ID=cfae866f-5007-4ae2-964a-d425c18712d8;date_last_modified=2020-05-13;Name=CDS.0.2486_0.0832002363577-00001;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 42090 42272 . + . Parent=cfae866f-5007-4ae2-964a-d425c18712d8;ID=b9445893-dd42-4a87-b451-f61dd30851ec;Name=b9445893-dd42-4a87-b451-f61dd30851ec +NC_001416.1_phage_lambda . exon 42080 42084 . + . Parent=cfae866f-5007-4ae2-964a-d425c18712d8;ID=8c1f8ca1-fd3e-47b0-828b-31d8845a7a43;Name=8c1f8ca1-fd3e-47b0-828b-31d8845a7a43 +NC_001416.1_phage_lambda . CDS 42090 42272 . + 0 Parent=cfae866f-5007-4ae2-964a-d425c18712d8;ID=17e5fc2d-5d91-403b-afd1-805c4edf360a;Name=17e5fc2d-5d91-403b-afd1-805c4edf360a +### +NC_001416.1_phage_lambda . gene 8946 9695 . + . owner=jolenerr@tamu.edu;ID=d9ee7b0e-b4a7-48cf-8c4b-aa95ca8863e0;date_last_modified=2020-05-27;Name=tail tube protein V;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 8946 9695 . + . owner=jolenerr@tamu.edu;Parent=d9ee7b0e-b4a7-48cf-8c4b-aa95ca8863e0;ID=91671458-d428-452b-ae42-c8ae550f2f54;date_last_modified=2020-05-27;Name=tail tube protein V;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 8955 9695 . + 0 Parent=91671458-d428-452b-ae42-c8ae550f2f54;ID=751b5251-2775-4f12-8ca4-80bc2cf7380f;Name=751b5251-2775-4f12-8ca4-80bc2cf7380f +NC_001416.1_phage_lambda . exon 8955 9695 . + . Parent=91671458-d428-452b-ae42-c8ae550f2f54;ID=e0902973-4d57-4fcc-b161-42b0f36030a1;Name=e0902973-4d57-4fcc-b161-42b0f36030a1 +NC_001416.1_phage_lambda . exon 8946 8949 . + . Parent=91671458-d428-452b-ae42-c8ae550f2f54;ID=50d5630a-1b9b-4edd-aff3-339e326c7a60;Name=50d5630a-1b9b-4edd-aff3-339e326c7a60 +### +NC_001416.1_phage_lambda . gene 10528 13103 . + . owner=jolenerr@tamu.edu;ID=7ef9ffad-d420-4a1c-9a8d-2312dc04b558;date_last_modified=2020-05-27;Name=tape measure protein H;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 10528 13103 . + . owner=jolenerr@tamu.edu;Parent=7ef9ffad-d420-4a1c-9a8d-2312dc04b558;ID=d8147a09-fa20-498d-90ae-5c8e620927c5;date_last_modified=2020-05-27;Name=tape measure protein H;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 10542 13103 . + . Parent=d8147a09-fa20-498d-90ae-5c8e620927c5;ID=09b3d59c-0f22-4a59-abeb-b0f2c03a0d6d;Name=09b3d59c-0f22-4a59-abeb-b0f2c03a0d6d +NC_001416.1_phage_lambda . CDS 10542 13103 . + 0 Parent=d8147a09-fa20-498d-90ae-5c8e620927c5;ID=8179e2f8-7d1e-47ca-ba9a-249bdbac6ce6;Name=8179e2f8-7d1e-47ca-ba9a-249bdbac6ce6 +NC_001416.1_phage_lambda . exon 10528 10533 . + . Parent=d8147a09-fa20-498d-90ae-5c8e620927c5;ID=c1804a26-c38e-47d8-9287-87901ce2629b;Name=c1804a26-c38e-47d8-9287-87901ce2629b +### +NC_001416.1_phage_lambda . gene 32816 33124 . - . owner=jolenerr@tamu.edu;ID=411ff345-0c28-4335-a864-560ee4fc66c6;date_last_modified=2020-05-27;Name=host-nuclease inhibitor protein gam;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 32816 33124 . - . owner=jolenerr@tamu.edu;Parent=411ff345-0c28-4335-a864-560ee4fc66c6;ID=d6522124-94e4-4c0d-901d-939f27706d76;date_last_modified=2020-05-27;Name=host-nuclease inhibitor protein gam;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 33120 33124 . - . Parent=d6522124-94e4-4c0d-901d-939f27706d76;ID=a9c3ccd4-be76-44eb-a0f6-7054125bfb0d;Name=a9c3ccd4-be76-44eb-a0f6-7054125bfb0d +NC_001416.1_phage_lambda . exon 32816 33112 . - . Parent=d6522124-94e4-4c0d-901d-939f27706d76;ID=2e5f983e-f306-475b-b3f0-5c47d2b6f75c;Name=2e5f983e-f306-475b-b3f0-5c47d2b6f75c +NC_001416.1_phage_lambda . CDS 32816 33112 . - 0 Parent=d6522124-94e4-4c0d-901d-939f27706d76;ID=1733c812-6b38-4c6a-8a07-dac2d86a6e07;Name=1733c812-6b38-4c6a-8a07-dac2d86a6e07 +### +NC_001416.1_phage_lambda . gene 2824 4437 . + . owner=jolenerr@tamu.edu;ID=0695da41-cce8-4f07-a27a-eb42ac82ae56;date_last_modified=2020-05-27;Name=portal protein B;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 2824 4437 . + . owner=jolenerr@tamu.edu;Parent=0695da41-cce8-4f07-a27a-eb42ac82ae56;ID=136ed72d-6ee9-44e5-906c-62b5554a59c5;date_last_modified=2020-05-27;Name=portal protein B;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 2836 4437 . + 0 Parent=136ed72d-6ee9-44e5-906c-62b5554a59c5;ID=8febd960-3365-4445-8a2c-a6905489ed75;Name=8febd960-3365-4445-8a2c-a6905489ed75 +NC_001416.1_phage_lambda . exon 2824 2827 . + . Parent=136ed72d-6ee9-44e5-906c-62b5554a59c5;ID=8332fd3f-52e9-4eea-abde-90afea727274;Name=8332fd3f-52e9-4eea-abde-90afea727274 +NC_001416.1_phage_lambda . exon 2836 4437 . + . Parent=136ed72d-6ee9-44e5-906c-62b5554a59c5;ID=58a3b30b-2893-481c-9c9a-3bb5a2b52977;Name=58a3b30b-2893-481c-9c9a-3bb5a2b52977 +### +NC_001416.1_phage_lambda . gene 46459 46763 . - . owner=jolenerr@tamu.edu;ID=6eedd5c5-3c44-404a-af31-acee26522035;date_last_modified=2020-05-13;Name=bor;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 46459 46763 . - . owner=jolenerr@tamu.edu;Parent=6eedd5c5-3c44-404a-af31-acee26522035;ID=f467c0ea-f52e-408f-96a7-2cc8e2ae261c;date_last_modified=2020-05-13;Name=bor;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 46761 46763 . - . Parent=f467c0ea-f52e-408f-96a7-2cc8e2ae261c;ID=56b7f4ad-3e69-4f6e-a3c9-2f117d91f231;Name=56b7f4ad-3e69-4f6e-a3c9-2f117d91f231 +NC_001416.1_phage_lambda . exon 46459 46752 . - . Parent=f467c0ea-f52e-408f-96a7-2cc8e2ae261c;ID=9a311dec-bc02-4857-9325-6f7ec4f784fe;Name=9a311dec-bc02-4857-9325-6f7ec4f784fe +NC_001416.1_phage_lambda . CDS 46459 46752 . - 0 Parent=f467c0ea-f52e-408f-96a7-2cc8e2ae261c;ID=b52dc69d-b399-4643-b352-8d442e3d9815;Name=b52dc69d-b399-4643-b352-8d442e3d9815 +### +NC_001416.1_phage_lambda . gene 2622 2839 . + . owner=jolenerr@tamu.edu;Note=InterPro domain IPR004174,PMID 22087227 solves structure by NMR;ID=38175e36-b9e9-48ea-9d1c-7f115fae7194;date_last_modified=2020-05-28;Name=head completion protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 2622 2839 . + . owner=jolenerr@tamu.edu;Parent=38175e36-b9e9-48ea-9d1c-7f115fae7194;ID=1cb3bf11-562c-49a2-afe8-00cb51d4a4b5;date_last_modified=2020-05-27;Name=head completion protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 2622 2625 . + . Parent=1cb3bf11-562c-49a2-afe8-00cb51d4a4b5;ID=937edf11-26e5-4972-88e5-75b7abf68890;Name=937edf11-26e5-4972-88e5-75b7abf68890 +NC_001416.1_phage_lambda . exon 2633 2839 . + . Parent=1cb3bf11-562c-49a2-afe8-00cb51d4a4b5;ID=aca6c50f-6f2a-486c-a298-91e63e171a33;Name=aca6c50f-6f2a-486c-a298-91e63e171a33 +NC_001416.1_phage_lambda . CDS 2633 2839 . + 0 Parent=1cb3bf11-562c-49a2-afe8-00cb51d4a4b5;ID=37e28230-a07a-4479-bad4-56fb0007bd59;Name=37e28230-a07a-4479-bad4-56fb0007bd59 +### +NC_001416.1_phage_lambda . gene 10115 10549 . + . owner=jolenerr@tamu.edu;frameshift=a;ID=c6a11d3b-7b9d-446f-ba16-3a642f3f6fbd;date_last_modified=2020-05-27;Name=tape measure chaperone GT;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 10115 10549 . + . owner=jolenerr@tamu.edu;Parent=c6a11d3b-7b9d-446f-ba16-3a642f3f6fbd;ID=994d0df4-6d23-4adc-ad9b-307a13e9e96c;date_last_modified=2020-05-27;Name=tape measure chaperone GT;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 10115 10549 . + . Parent=994d0df4-6d23-4adc-ad9b-307a13e9e96c;ID=e07568e3-3071-46f6-b537-9c6c90e7f4d8;Name=e07568e3-3071-46f6-b537-9c6c90e7f4d8 +NC_001416.1_phage_lambda . CDS 10115 10549 . + 0 Parent=994d0df4-6d23-4adc-ad9b-307a13e9e96c;ID=c2fed17b-288c-4413-80e8-068f58cd559f;Name=c2fed17b-288c-4413-80e8-068f58cd559f +### +NC_001416.1_phage_lambda . gene 15493 18903 . + . owner=jolenerr@tamu.edu;ID=af1a2402-fb19-4abe-9a0b-b3e9dc613524;date_last_modified=2020-05-27;Name=tip attachment protein J;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 15493 18903 . + . owner=jolenerr@tamu.edu;Parent=af1a2402-fb19-4abe-9a0b-b3e9dc613524;ID=c0488c58-8117-4e4a-a8f5-86a12032ad25;date_last_modified=2020-05-27;Name=tip attachment protein J;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 15505 18903 . + 0 Parent=c0488c58-8117-4e4a-a8f5-86a12032ad25;ID=daaa8146-6a47-4621-b657-a4126278d662;Name=daaa8146-6a47-4621-b657-a4126278d662 +NC_001416.1_phage_lambda . exon 15493 15496 . + . Parent=c0488c58-8117-4e4a-a8f5-86a12032ad25;ID=78d80c78-392f-4a38-ac9e-60e1159d9c17;Name=78d80c78-392f-4a38-ac9e-60e1159d9c17 +NC_001416.1_phage_lambda . exon 15505 18903 . + . Parent=c0488c58-8117-4e4a-a8f5-86a12032ad25;ID=80a77d2d-855c-42a1-b0bd-dd86636f3dcc;Name=80a77d2d-855c-42a1-b0bd-dd86636f3dcc +### +NC_001416.1_phage_lambda . gene 34271 34357 . - . owner=jolenerr@tamu.edu;ID=819736c3-ac94-47f2-abdc-f6193a12b404;date_last_modified=2020-05-27;Name=orf28;date_creation=2020-05-27 +NC_001416.1_phage_lambda . mRNA 34271 34357 . - . owner=jolenerr@tamu.edu;Parent=819736c3-ac94-47f2-abdc-f6193a12b404;ID=8be9f716-bbb9-4b5b-b90d-6e59e614785f;date_last_modified=2020-05-27;Name=orf28-00001;date_creation=2020-05-27 +NC_001416.1_phage_lambda . exon 34271 34357 . - . Parent=8be9f716-bbb9-4b5b-b90d-6e59e614785f;ID=84501a32-631d-4ab3-8e15-568100260793;Name=84501a32-631d-4ab3-8e15-568100260793 +NC_001416.1_phage_lambda . CDS 34271 34357 . - 0 Parent=8be9f716-bbb9-4b5b-b90d-6e59e614785f;ID=6ac3c562-8606-417f-8801-47d340be8f13;Name=6ac3c562-8606-417f-8801-47d340be8f13 +### +NC_001416.1_phage_lambda . gene 29374 29667 . - . owner=jolenerr@tamu.edu;Note=Contains CATH G3DSA:1.10.10.1920 with putative hydrolase domain;ID=375742bf-c4c9-46e2-b49c-3db72351ae5d;date_last_modified=2020-05-27;Name=protein ea8.5;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 29374 29667 . - . owner=jolenerr@tamu.edu;Parent=375742bf-c4c9-46e2-b49c-3db72351ae5d;ID=f6da5c7f-0e9e-442f-9185-03a78b626069;date_last_modified=2020-05-27;Name=protein ea8.5;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 29663 29667 . - . Parent=f6da5c7f-0e9e-442f-9185-03a78b626069;ID=7e6a22eb-fc64-4d7b-a23f-107328cde024;Name=7e6a22eb-fc64-4d7b-a23f-107328cde024 +NC_001416.1_phage_lambda . CDS 29374 29655 . - 0 Parent=f6da5c7f-0e9e-442f-9185-03a78b626069;ID=d1966aba-05aa-4b28-bf9c-d20786258520;Name=d1966aba-05aa-4b28-bf9c-d20786258520 +NC_001416.1_phage_lambda . exon 29374 29655 . - . Parent=f6da5c7f-0e9e-442f-9185-03a78b626069;ID=ade6501a-a05f-4a14-b680-3e91086c0d1e;Name=ade6501a-a05f-4a14-b680-3e91086c0d1e +### +NC_001416.1_phage_lambda . gene 47042 47463 . - . owner=jolenerr@tamu.edu;ID=5d4e2403-4389-497c-a220-9740cd9935cc;date_last_modified=2020-05-13;Name=CDS.0.2625_0.768191840841;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 47042 47463 . - . owner=jolenerr@tamu.edu;Parent=5d4e2403-4389-497c-a220-9740cd9935cc;ID=6a3b98a0-c7ad-404f-8476-f19bd2f4db4c;date_last_modified=2020-05-13;Name=CDS.0.2625_0.768191840841-00001;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 47042 47452 . - . Parent=6a3b98a0-c7ad-404f-8476-f19bd2f4db4c;ID=e58cc24e-6d9e-407a-ace6-c384766d404d;Name=e58cc24e-6d9e-407a-ace6-c384766d404d +NC_001416.1_phage_lambda . CDS 47042 47452 . - 0 Parent=6a3b98a0-c7ad-404f-8476-f19bd2f4db4c;ID=69439d46-dbb9-40da-a423-cd94742b3e05;Name=69439d46-dbb9-40da-a423-cd94742b3e05 +NC_001416.1_phage_lambda . exon 47460 47463 . - . Parent=6a3b98a0-c7ad-404f-8476-f19bd2f4db4c;ID=fa87b275-81e8-404e-8104-787fb31b1966;Name=fa87b275-81e8-404e-8104-787fb31b1966 +### +NC_001416.1_phage_lambda . gene 40268 40570 . + . owner=jolenerr@tamu.edu;ID=a15b44d2-c0d8-4c0b-9837-2c3c986b6ff4;date_last_modified=2020-05-27;Name=ren exclusion protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 40268 40570 . + . owner=jolenerr@tamu.edu;Parent=a15b44d2-c0d8-4c0b-9837-2c3c986b6ff4;ID=3de42f2d-f2ef-43b0-961b-ce9e2de4db80;date_last_modified=2020-05-27;Name=ren exclusion protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 40268 40272 . + . Parent=3de42f2d-f2ef-43b0-961b-ce9e2de4db80;ID=525e8f0d-f2b1-492f-b066-ac740a69ce0c;Name=525e8f0d-f2b1-492f-b066-ac740a69ce0c +NC_001416.1_phage_lambda . CDS 40280 40570 . + 0 Parent=3de42f2d-f2ef-43b0-961b-ce9e2de4db80;ID=d64ff06e-a89a-409c-9bed-84e3be21fa85;Name=d64ff06e-a89a-409c-9bed-84e3be21fa85 +NC_001416.1_phage_lambda . exon 40280 40570 . + . Parent=3de42f2d-f2ef-43b0-961b-ce9e2de4db80;ID=b729ffc3-ee89-49a6-8ba8-cd62fc0c4908;Name=b729ffc3-ee89-49a6-8ba8-cd62fc0c4908 +### +NC_001416.1_phage_lambda . gene 27444 27569 . - . owner=jolenerr@tamu.edu;ID=ae844fd4-9b05-485e-a49a-61b6ec9f291a;date_last_modified=2020-05-27;Name=CDS.0.4499_0.266127908605;date_creation=2020-05-27 +NC_001416.1_phage_lambda . mRNA 27444 27569 . - . owner=jolenerr@tamu.edu;Parent=ae844fd4-9b05-485e-a49a-61b6ec9f291a;ID=59fd6074-cb7a-4ca3-aadb-7b8b40cd18f5;date_last_modified=2020-05-27;Name=CDS.0.4499_0.266127908605-00001;date_creation=2020-05-27 +NC_001416.1_phage_lambda . exon 27566 27569 . - . Parent=59fd6074-cb7a-4ca3-aadb-7b8b40cd18f5;ID=8111d722-e5a1-40c6-8b87-6dcbc401d337;Name=8111d722-e5a1-40c6-8b87-6dcbc401d337 +NC_001416.1_phage_lambda . CDS 27444 27560 . - 0 Parent=59fd6074-cb7a-4ca3-aadb-7b8b40cd18f5;ID=66e21d96-ea02-4ac6-9a44-d9cb14325318;Name=66e21d96-ea02-4ac6-9a44-d9cb14325318 +NC_001416.1_phage_lambda . exon 27444 27560 . - . Parent=59fd6074-cb7a-4ca3-aadb-7b8b40cd18f5;ID=d11e7074-0963-4503-9f7d-313244d958bd;Name=d11e7074-0963-4503-9f7d-313244d958bd +### +NC_001416.1_phage_lambda . gene 34417 34534 . + . owner=jolenerr@tamu.edu;ID=3bd258c3-0580-4bbd-9cbe-4c847adc452e;date_last_modified=2020-05-27;Name=CDS.0.1464_0.0965447626014;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 34417 34534 . + . owner=jolenerr@tamu.edu;Parent=3bd258c3-0580-4bbd-9cbe-4c847adc452e;ID=3a389c79-fdb9-460d-82f9-9cb3d47992e1;date_last_modified=2020-05-13;Name=CDS.0.1464_0.0965447626014-00001;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 34433 34534 . + 0 Parent=3a389c79-fdb9-460d-82f9-9cb3d47992e1;ID=3d44c6b8-2643-4a9e-9c0a-c7d17a57a66c;Name=3d44c6b8-2643-4a9e-9c0a-c7d17a57a66c +NC_001416.1_phage_lambda . exon 34433 34534 . + . Parent=3a389c79-fdb9-460d-82f9-9cb3d47992e1;ID=5ecaa49d-849b-43d0-bc71-0f37158cf88a;Name=5ecaa49d-849b-43d0-bc71-0f37158cf88a +NC_001416.1_phage_lambda . exon 34417 34419 . + . Parent=3a389c79-fdb9-460d-82f9-9cb3d47992e1;ID=0c6ed2f9-9ea8-4c47-a3ff-b95dadd0968f;Name=0c6ed2f9-9ea8-4c47-a3ff-b95dadd0968f +### +NC_001416.1_phage_lambda . gene 13089 13429 . + . owner=jolenerr@tamu.edu;ID=55fe46da-9e0e-4454-aff9-f9a12c0a2da4;date_last_modified=2020-05-27;Name=tail tip protein M;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 13089 13429 . + . owner=jolenerr@tamu.edu;Parent=55fe46da-9e0e-4454-aff9-f9a12c0a2da4;ID=1463445e-4254-4b09-86f3-89a21ab2a2ab;date_last_modified=2020-05-27;Name=tail tip protein M;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 13100 13429 . + 0 Parent=1463445e-4254-4b09-86f3-89a21ab2a2ab;ID=acce5e9e-48c3-4c5b-b0b7-0f76d353300e;Name=acce5e9e-48c3-4c5b-b0b7-0f76d353300e +NC_001416.1_phage_lambda . exon 13100 13429 . + . Parent=1463445e-4254-4b09-86f3-89a21ab2a2ab;ID=1775c91f-bb25-4b61-b703-6f102dd3eedc;Name=1775c91f-bb25-4b61-b703-6f102dd3eedc +NC_001416.1_phage_lambda . exon 13089 13094 . + . Parent=1463445e-4254-4b09-86f3-89a21ab2a2ab;ID=07188225-4692-4856-9ce6-b1ace3f6892b;Name=07188225-4692-4856-9ce6-b1ace3f6892b +### +NC_001416.1_phage_lambda . gene 45175 45509 . + . owner=jolenerr@tamu.edu;ID=94064736-88a6-4e82-8c89-8226f57526e8;date_last_modified=2020-05-13;Name=antiholin S107;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 45175 45509 . + . owner=jolenerr@tamu.edu;Parent=94064736-88a6-4e82-8c89-8226f57526e8;ID=56bb4ef4-7b98-43bd-b266-d213c88ae16f;date_last_modified=2020-05-13;Name=antiholin S107;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 45175 45179 . + . Parent=56bb4ef4-7b98-43bd-b266-d213c88ae16f;ID=4f2c54ba-141b-4c5c-a37b-2906be78c50f;Name=4f2c54ba-141b-4c5c-a37b-2906be78c50f +NC_001416.1_phage_lambda . exon 45186 45509 . + . Parent=56bb4ef4-7b98-43bd-b266-d213c88ae16f;ID=b055a5e0-0195-4645-a856-7d8be1618b73;Name=b055a5e0-0195-4645-a856-7d8be1618b73 +NC_001416.1_phage_lambda . CDS 45186 45509 . + 0 Parent=56bb4ef4-7b98-43bd-b266-d213c88ae16f;ID=6a8d644c-b1ac-4b73-a193-b13c7370e726;Name=6a8d644c-b1ac-4b73-a193-b13c7370e726 +NC_001416.1_phage_lambda . mRNA 45175 45509 . + . owner=jolenerr@tamu.edu;Parent=94064736-88a6-4e82-8c89-8226f57526e8;ID=1810c0cc-6f9b-4cf5-9fb6-85b8a9eb2a7b;date_last_modified=2020-05-13;Name=holin S;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 45192 45509 . + 0 Parent=1810c0cc-6f9b-4cf5-9fb6-85b8a9eb2a7b;ID=e02b3440-6447-4fe3-8e53-3cc76137ab9f;Name=e02b3440-6447-4fe3-8e53-3cc76137ab9f +NC_001416.1_phage_lambda . exon 45175 45179 . + . Parent=1810c0cc-6f9b-4cf5-9fb6-85b8a9eb2a7b;ID=28f3de2d-c6b8-4bb2-acb7-760106d94a60;Name=28f3de2d-c6b8-4bb2-acb7-760106d94a60 +NC_001416.1_phage_lambda . exon 45192 45509 . + . Parent=1810c0cc-6f9b-4cf5-9fb6-85b8a9eb2a7b;ID=ad95e682-216f-439d-864f-32c5bdf5d70b;Name=ad95e682-216f-439d-864f-32c5bdf5d70b +### +NC_001416.1_phage_lambda . gene 9699 10133 . + . owner=jolenerr@tamu.edu;frameshift=a;ID=0b5a859a-39f6-4c49-91b7-0b2def466374;date_last_modified=2020-05-27;Name=tape measure chaperone GT;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 9699 10133 . + . owner=jolenerr@tamu.edu;Parent=0b5a859a-39f6-4c49-91b7-0b2def466374;ID=066626d8-a024-46ed-b197-7be854dfe58a;date_last_modified=2020-05-27;Name=tape measure chaperone G;date_creation=2020-05-27 +NC_001416.1_phage_lambda . exon 9699 9702 . + . Parent=066626d8-a024-46ed-b197-7be854dfe58a;ID=fc54a6c4-6918-4f9f-a86b-e54e56e63456;Name=fc54a6c4-6918-4f9f-a86b-e54e56e63456 +NC_001416.1_phage_lambda . exon 9711 10133 . + . Parent=066626d8-a024-46ed-b197-7be854dfe58a;ID=6cbab6c9-7263-4eaa-8a7a-a9aae7b38814;Name=6cbab6c9-7263-4eaa-8a7a-a9aae7b38814 +NC_001416.1_phage_lambda . CDS 9711 10133 . + 0 Parent=066626d8-a024-46ed-b197-7be854dfe58a;ID=d9f2d580-8d3a-4674-bc89-68ec6242a770;Name=d9f2d580-8d3a-4674-bc89-68ec6242a770 +NC_001416.1_phage_lambda . mRNA 9699 10115 . + . owner=jolenerr@tamu.edu;Parent=0b5a859a-39f6-4c49-91b7-0b2def466374;ID=0de4bbe3-fe4b-46d9-b547-9db2edc8bc19;date_last_modified=2020-05-27;Name=tape measure chaperone GT;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 9699 9702 . + . Parent=0de4bbe3-fe4b-46d9-b547-9db2edc8bc19;ID=a0f81e00-a11e-4662-b946-e4d122bb1a91;Name=a0f81e00-a11e-4662-b946-e4d122bb1a91 +NC_001416.1_phage_lambda . exon 9711 10115 . + . Parent=0de4bbe3-fe4b-46d9-b547-9db2edc8bc19;ID=3f523d5f-405a-4c26-aab5-1cf51041696a;Name=3f523d5f-405a-4c26-aab5-1cf51041696a +NC_001416.1_phage_lambda . CDS 9711 10115 . + 0 Parent=0de4bbe3-fe4b-46d9-b547-9db2edc8bc19;ID=cc616186-7484-421c-928c-4036c8fab9b4;Name=cc616186-7484-421c-928c-4036c8fab9b4 +### +NC_001416.1_phage_lambda . gene 20852 21973 . + . owner=jolenerr@tamu.edu;ID=9ffb2fcd-96b9-4606-8d3c-c1be0cf0fc5b;date_last_modified=2020-05-27;Name=tail fiber protein stf;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 20852 21973 . + . owner=jolenerr@tamu.edu;Parent=9ffb2fcd-96b9-4606-8d3c-c1be0cf0fc5b;ID=90710d39-0dd2-434e-bca9-2dbd2d3fa4c3;date_last_modified=2020-05-27;Name=tail fiber protein stf;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 20852 21973 . + . Parent=90710d39-0dd2-434e-bca9-2dbd2d3fa4c3;ID=cf1f8eef-2f85-49d9-bd9a-10be54ae41db;Name=cf1f8eef-2f85-49d9-bd9a-10be54ae41db +NC_001416.1_phage_lambda . CDS 20852 21973 . + 0 Parent=90710d39-0dd2-434e-bca9-2dbd2d3fa4c3;ID=198e0dc7-fba5-44fb-8a76-fd67353df314;Name=198e0dc7-fba5-44fb-8a76-fd67353df314 +### +NC_001416.1_phage_lambda . gene 25396 26983 . - . owner=jolenerr@tamu.edu;Note=PMID 8052130,Contains InterPro domain IPR003959;ID=27a0e836-ee65-4d75-9d88-2d63b4a28b93;date_last_modified=2020-05-27;Name=nuclease ea59;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 25396 26983 . - . owner=jolenerr@tamu.edu;Parent=27a0e836-ee65-4d75-9d88-2d63b4a28b93;ID=f82638cf-a98d-4741-a3b4-d952eeed32a0;date_last_modified=2020-05-27;Name=nuclease ea59;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 25396 26973 . - 0 Parent=f82638cf-a98d-4741-a3b4-d952eeed32a0;ID=98cc9ed4-07a9-4cb4-a212-df5ac7662494;Name=98cc9ed4-07a9-4cb4-a212-df5ac7662494 +NC_001416.1_phage_lambda . exon 25396 26973 . - . Parent=f82638cf-a98d-4741-a3b4-d952eeed32a0;ID=3ca7095d-4be8-4558-bdf7-2dd560dd84fe;Name=3ca7095d-4be8-4558-bdf7-2dd560dd84fe +NC_001416.1_phage_lambda . exon 26980 26983 . - . Parent=f82638cf-a98d-4741-a3b4-d952eeed32a0;ID=c36e0f12-27ed-4286-b132-3c62984d968d;Name=c36e0f12-27ed-4286-b132-3c62984d968d +### +NC_001416.1_phage_lambda . gene 36275 37124 . - . owner=jason.gill@tamu.edu;Note=added by JJG;ID=83e81e47-1e39-4cbf-a67d-57e808d97412;date_last_modified=2020-05-27;Name=exclusion protein rexA;date_creation=2019-02-07 +NC_001416.1_phage_lambda . mRNA 36275 37124 . - . owner=jason.gill@tamu.edu;Parent=83e81e47-1e39-4cbf-a67d-57e808d97412;ID=12f36271-9a46-4013-9f49-94473775f910;date_last_modified=2020-05-27;Name=exclusion protein rexA;date_creation=2019-02-07 +NC_001416.1_phage_lambda . CDS 36275 37114 . - 0 Parent=12f36271-9a46-4013-9f49-94473775f910;ID=aa0e418f-ace1-4738-b698-92f5d162e5f3;Name=aa0e418f-ace1-4738-b698-92f5d162e5f3 +NC_001416.1_phage_lambda . exon 36275 37114 . - . Parent=12f36271-9a46-4013-9f49-94473775f910;ID=1765ee36-7b9d-4cc2-bca7-5d2eb564d061;Name=1765ee36-7b9d-4cc2-bca7-5d2eb564d061 +NC_001416.1_phage_lambda . exon 37122 37124 . - . Parent=12f36271-9a46-4013-9f49-94473775f910;ID=8189c63f-33aa-4934-8e90-f49593ba1e57;Name=8189c63f-33aa-4934-8e90-f49593ba1e57 +### +NC_001416.1_phage_lambda . gene 701 2636 . + . owner=jolenerr@tamu.edu;ID=6d452f5a-9508-40c1-9d43-d98831ca8919;date_last_modified=2020-05-27;Name=terminase large subunit;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 701 2636 . + . owner=jolenerr@tamu.edu;Parent=6d452f5a-9508-40c1-9d43-d98831ca8919;ID=ff09bb40-341a-4351-9769-af6c08e01707;date_last_modified=2020-05-27;Name=terminase large subunit;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 701 704 . + . Parent=ff09bb40-341a-4351-9769-af6c08e01707;ID=58fd69bd-480f-4212-99f8-ea311880e6d7;Name=58fd69bd-480f-4212-99f8-ea311880e6d7 +NC_001416.1_phage_lambda . exon 711 2636 . + . Parent=ff09bb40-341a-4351-9769-af6c08e01707;ID=31f565a0-7be7-4e80-a5a4-34dc5fbc894a;Name=31f565a0-7be7-4e80-a5a4-34dc5fbc894a +NC_001416.1_phage_lambda . CDS 711 2636 . + 0 Parent=ff09bb40-341a-4351-9769-af6c08e01707;ID=031026d9-32df-4d8b-8048-f45a0d2712fb;Name=031026d9-32df-4d8b-8048-f45a0d2712fb +### +NC_001416.1_phage_lambda . gene 46896 47029 . - . owner=jolenerr@tamu.edu;ID=2da1b434-7877-4aa2-b88b-24922f70988b;date_last_modified=2020-05-13;Name=CDS.0.3497_0.36888415839;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 46896 47008 . - . owner=jolenerr@tamu.edu;Parent=2da1b434-7877-4aa2-b88b-24922f70988b;ID=30f56091-48e8-49bc-8279-b3ec633b742c;date_last_modified=2020-05-13;Name=CDS.0.3497_0.36888415839-00002;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 46896 46994 . - . Parent=30f56091-48e8-49bc-8279-b3ec633b742c;ID=a8ab067a-00f8-4e00-98df-0f2ddbd2fc1d;Name=a8ab067a-00f8-4e00-98df-0f2ddbd2fc1d +NC_001416.1_phage_lambda . exon 47005 47008 . - . Parent=30f56091-48e8-49bc-8279-b3ec633b742c;ID=0bbb213e-3d2e-4395-9bfb-5644080da41e;Name=0bbb213e-3d2e-4395-9bfb-5644080da41e +NC_001416.1_phage_lambda . CDS 46896 46994 . - 0 Parent=30f56091-48e8-49bc-8279-b3ec633b742c;ID=a3a6bfa4-d24b-4149-856b-c6c0bdb9f28b;Name=a3a6bfa4-d24b-4149-856b-c6c0bdb9f28b +### +NC_001416.1_phage_lambda . gene 24509 25411 . - . owner=jolenerr@tamu.edu;ID=a638e771-ca1f-4058-93a6-b9bddffd0bf8;date_last_modified=2020-05-27;Name=HNH endonuclease ea31;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 24509 25411 . - . owner=jolenerr@tamu.edu;Parent=a638e771-ca1f-4058-93a6-b9bddffd0bf8;ID=cdc008e2-d2ef-404b-b3fd-b8d1b305883f;date_last_modified=2020-05-27;Name=HNH endonuclease ea31;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 24509 25399 . - . Parent=cdc008e2-d2ef-404b-b3fd-b8d1b305883f;ID=2052dd81-1eb2-466e-99ed-8364be27bd15;Name=2052dd81-1eb2-466e-99ed-8364be27bd15 +NC_001416.1_phage_lambda . CDS 24509 25399 . - 0 Parent=cdc008e2-d2ef-404b-b3fd-b8d1b305883f;ID=70233b7c-5f02-4674-8069-01a295d08e0f;Name=70233b7c-5f02-4674-8069-01a295d08e0f +NC_001416.1_phage_lambda . exon 25408 25411 . - . Parent=cdc008e2-d2ef-404b-b3fd-b8d1b305883f;ID=13c18339-b21f-453c-b6e2-a81ad9e52360;Name=13c18339-b21f-453c-b6e2-a81ad9e52360 +### +NC_001416.1_phage_lambda . gene 181 736 . + . owner=jolenerr@tamu.edu;ID=1185c0aa-14c4-45c3-ab0d-889bbfdbf137;date_last_modified=2020-05-27;Name=terminase small subunit;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 181 736 . + . owner=jolenerr@tamu.edu;Parent=1185c0aa-14c4-45c3-ab0d-889bbfdbf137;ID=7305f517-52c0-451a-8a2a-dd5c4171d091;date_last_modified=2020-05-27;Name=terminase small subunit;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 181 183 . + . Parent=7305f517-52c0-451a-8a2a-dd5c4171d091;ID=eface821-b1ca-4589-afcc-6e0cfeac6a7d;Name=eface821-b1ca-4589-afcc-6e0cfeac6a7d +NC_001416.1_phage_lambda . exon 191 736 . + . Parent=7305f517-52c0-451a-8a2a-dd5c4171d091;ID=cc7a2d53-ca33-4ada-85d8-b8dae5b5aced;Name=cc7a2d53-ca33-4ada-85d8-b8dae5b5aced +NC_001416.1_phage_lambda . CDS 191 736 . + 0 Parent=7305f517-52c0-451a-8a2a-dd5c4171d091;ID=bd324ade-329a-4973-8aa7-d889e65bf502;Name=bd324ade-329a-4973-8aa7-d889e65bf502 +### +NC_001416.1_phage_lambda . gene 29847 30405 . - . owner=jolenerr@tamu.edu;ID=c3708fda-012f-40ac-91d0-96ce2b9bc845;date_last_modified=2020-05-27;Name=protein ea22;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 29847 30405 . - . owner=jolenerr@tamu.edu;Parent=c3708fda-012f-40ac-91d0-96ce2b9bc845;ID=dc13e0e1-15a9-46c1-8fea-5eb713a07e46;date_last_modified=2020-05-27;Name=protein ea22;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 29847 30395 . - . Parent=dc13e0e1-15a9-46c1-8fea-5eb713a07e46;ID=d78d3aab-62ae-4929-9019-3e43aec9ac5d;Name=d78d3aab-62ae-4929-9019-3e43aec9ac5d +NC_001416.1_phage_lambda . exon 30401 30405 . - . Parent=dc13e0e1-15a9-46c1-8fea-5eb713a07e46;ID=e0bf3791-2f32-4313-bce1-2fe49064725d;Name=e0bf3791-2f32-4313-bce1-2fe49064725d +NC_001416.1_phage_lambda . CDS 29847 30395 . - 0 Parent=dc13e0e1-15a9-46c1-8fea-5eb713a07e46;ID=9df41302-3ec7-44cc-8380-5843972c25a2;Name=9df41302-3ec7-44cc-8380-5843972c25a2 +### +NC_001416.1_phage_lambda . gene 8535 8947 . + . owner=jolenerr@tamu.edu;ID=fca8745c-c433-4845-9430-c8a9dd4dc37b;date_last_modified=2020-05-27;Name=tail tube terminator protein U;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 8535 8947 . + . owner=jolenerr@tamu.edu;Parent=fca8745c-c433-4845-9430-c8a9dd4dc37b;ID=b859eb4d-a967-40d8-969e-7e94d83683f5;date_last_modified=2020-05-27;Name=tail tube terminator protein U;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 8552 8947 . + . Parent=b859eb4d-a967-40d8-969e-7e94d83683f5;ID=11a7161a-66ca-4f90-9bac-7206aa4ca39f;Name=11a7161a-66ca-4f90-9bac-7206aa4ca39f +NC_001416.1_phage_lambda . CDS 8552 8947 . + 0 Parent=b859eb4d-a967-40d8-969e-7e94d83683f5;ID=9d1355f7-3bd4-4f2d-ac8f-3cc954d7ed1c;Name=9d1355f7-3bd4-4f2d-ac8f-3cc954d7ed1c +NC_001416.1_phage_lambda . exon 8535 8538 . + . Parent=b859eb4d-a967-40d8-969e-7e94d83683f5;ID=9fdc9a26-b154-47fa-813a-2c8fedba80c0;Name=9fdc9a26-b154-47fa-813a-2c8fedba80c0 +### +NC_001416.1_phage_lambda . gene 42419 43043 . + . owner=jolenerr@tamu.edu;ID=a8c3d9d2-cc66-4394-a821-ec0db2e411de;date_last_modified=2020-05-13;Name=NC_001416.1_phage_lambda.gene_51;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 42419 43043 . + . owner=jolenerr@tamu.edu;Parent=a8c3d9d2-cc66-4394-a821-ec0db2e411de;ID=69c025b3-b1b8-4145-b744-edbfa8fc8fb3;date_last_modified=2020-05-13;Name=NC_001416.1_phage_lambda.gene_51-00001;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 42429 43043 . + . Parent=69c025b3-b1b8-4145-b744-edbfa8fc8fb3;ID=a9a47ee3-0e4a-48f8-948b-22ff77582290;Name=a9a47ee3-0e4a-48f8-948b-22ff77582290 +NC_001416.1_phage_lambda . exon 42419 42422 . + . Parent=69c025b3-b1b8-4145-b744-edbfa8fc8fb3;ID=68ee08e1-a978-474f-9d75-9f8b6e9f030e;Name=68ee08e1-a978-474f-9d75-9f8b6e9f030e +NC_001416.1_phage_lambda . CDS 42429 43043 . + 0 Parent=69c025b3-b1b8-4145-b744-edbfa8fc8fb3;ID=33e3ac90-49c3-4b85-9702-9be46b7ff28d;Name=33e3ac90-49c3-4b85-9702-9be46b7ff28d +### +NC_001416.1_phage_lambda . gene 35037 35451 . - . owner=jason.gill@tamu.edu;ID=b8e42f64-15ef-4fb6-b491-5f68bc0bfecd;date_last_modified=2020-05-27;Name=antitermination protein N;date_creation=2019-02-07 +NC_001416.1_phage_lambda . mRNA 35037 35451 . - . owner=jason.gill@tamu.edu;Parent=b8e42f64-15ef-4fb6-b491-5f68bc0bfecd;ID=f734e825-99e5-42ce-ae66-dc94f95b8aa4;date_last_modified=2020-05-27;Name=antitermination protein N;date_creation=2019-02-07 +NC_001416.1_phage_lambda . exon 35037 35438 . - . Parent=f734e825-99e5-42ce-ae66-dc94f95b8aa4;ID=eeaea0ca-fa74-4b62-ac92-7d1a9c300ecb;Name=eeaea0ca-fa74-4b62-ac92-7d1a9c300ecb +NC_001416.1_phage_lambda . exon 35449 35451 . - . Parent=f734e825-99e5-42ce-ae66-dc94f95b8aa4;ID=976a2782-0c59-439a-a981-16a409ea9dbe;Name=976a2782-0c59-439a-a981-16a409ea9dbe +NC_001416.1_phage_lambda . CDS 35037 35438 . - 0 Parent=f734e825-99e5-42ce-ae66-dc94f95b8aa4;ID=b297f79a-701e-4c92-8773-872dd72554c7;Name=b297f79a-701e-4c92-8773-872dd72554c7 +### +NC_001416.1_phage_lambda . gene 35825 36269 . - . owner=jason.gill@tamu.edu;Note=added by JJG;ID=79c4329a-2551-40cf-85bc-ec2ee1425459;date_last_modified=2020-05-27;Name=exclusion protein rexB;date_creation=2019-02-07 +NC_001416.1_phage_lambda . mRNA 35825 36269 . - . owner=jason.gill@tamu.edu;Parent=79c4329a-2551-40cf-85bc-ec2ee1425459;ID=50146c6a-018d-4e95-be21-126217a541fd;date_last_modified=2020-05-27;Name=exclusion protein rexB;date_creation=2019-02-07 +NC_001416.1_phage_lambda . exon 36265 36269 . - . Parent=50146c6a-018d-4e95-be21-126217a541fd;ID=0c9976f4-e0ae-49e6-8d98-32ee36e3ebcd;Name=0c9976f4-e0ae-49e6-8d98-32ee36e3ebcd +NC_001416.1_phage_lambda . exon 35825 36259 . - . Parent=50146c6a-018d-4e95-be21-126217a541fd;ID=245432f1-8787-4fd3-bb29-e2d54f2cac24;Name=245432f1-8787-4fd3-bb29-e2d54f2cac24 +NC_001416.1_phage_lambda . CDS 35825 36259 . - 0 Parent=50146c6a-018d-4e95-be21-126217a541fd;ID=0681032b-0845-45d3-8107-27bf36ef0b3c;Name=0681032b-0845-45d3-8107-27bf36ef0b3c +### +NC_001416.1_phage_lambda . gene 29118 29296 . - . owner=jolenerr@tamu.edu;ID=e15c9216-cdbd-4539-879b-9ab30db54d25;date_last_modified=2020-05-27;Name=hypothetical protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 29118 29296 . - . owner=jolenerr@tamu.edu;Parent=e15c9216-cdbd-4539-879b-9ab30db54d25;ID=e8eef5b8-2983-4afb-8180-65601db335e6;date_last_modified=2020-05-27;Name=hypothetical protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 29118 29285 . - . Parent=e8eef5b8-2983-4afb-8180-65601db335e6;ID=a40fb99b-afcb-4eb0-88bc-1b54788c6bd4;Name=a40fb99b-afcb-4eb0-88bc-1b54788c6bd4 +NC_001416.1_phage_lambda . exon 29293 29296 . - . Parent=e8eef5b8-2983-4afb-8180-65601db335e6;ID=58d8fe51-c8b9-449b-858a-abb2b02a0cb1;Name=58d8fe51-c8b9-449b-858a-abb2b02a0cb1 +NC_001416.1_phage_lambda . CDS 29118 29285 . - 0 Parent=e8eef5b8-2983-4afb-8180-65601db335e6;ID=06c62815-06cb-41aa-811b-07009faa18b1;Name=06c62815-06cb-41aa-811b-07009faa18b1 +### +NC_001416.1_phage_lambda . gene 7603 7965 . + . owner=jolenerr@tamu.edu;ID=638d1ac5-aea4-4988-b46d-01cf79793dfb;date_last_modified=2020-05-27;Name=head-tail connector protein FII;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 7603 7965 . + . owner=jolenerr@tamu.edu;Parent=638d1ac5-aea4-4988-b46d-01cf79793dfb;ID=10cff28f-6e50-45ad-91e5-b9567de32642;date_last_modified=2020-05-27;Name=head-tail connector protein FII;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 7603 7606 . + . Parent=10cff28f-6e50-45ad-91e5-b9567de32642;ID=5763dd34-4f0b-4b71-825b-c3faba4bf021;Name=5763dd34-4f0b-4b71-825b-c3faba4bf021 +NC_001416.1_phage_lambda . CDS 7612 7965 . + 0 Parent=10cff28f-6e50-45ad-91e5-b9567de32642;ID=f2790e9e-43f4-4def-83ad-eec13fcf30f2;Name=f2790e9e-43f4-4def-83ad-eec13fcf30f2 +NC_001416.1_phage_lambda . exon 7612 7965 . + . Parent=10cff28f-6e50-45ad-91e5-b9567de32642;ID=11643ed9-d29e-4279-b282-26ee90c0ac3e;Name=11643ed9-d29e-4279-b282-26ee90c0ac3e +### +NC_001416.1_phage_lambda . gene 34487 35036 . + . owner=jolenerr@tamu.edu;ID=8ce03ed0-ef00-4c52-a0a9-2b2a86bca875;date_last_modified=2020-05-27;Name=superinfection exclusion protein B;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 34544 35036 . + . owner=jolenerr@tamu.edu;Parent=8ce03ed0-ef00-4c52-a0a9-2b2a86bca875;ID=c39a5288-122f-4efe-ad2b-fa21f0321dc5;date_last_modified=2020-05-27;Name=superinfection exclusion protein B;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 34554 35036 . + . Parent=c39a5288-122f-4efe-ad2b-fa21f0321dc5;ID=d36c5568-095f-41c4-8241-e925f56455a7;Name=d36c5568-095f-41c4-8241-e925f56455a7 +NC_001416.1_phage_lambda . CDS 34554 35036 . + 0 Parent=c39a5288-122f-4efe-ad2b-fa21f0321dc5;ID=9ffea9bc-fb7e-4e31-937e-42831bc3df66;Name=9ffea9bc-fb7e-4e31-937e-42831bc3df66 +NC_001416.1_phage_lambda . exon 34544 34547 . + . Parent=c39a5288-122f-4efe-ad2b-fa21f0321dc5;ID=39f1c372-c9fd-4fae-a474-a60313c0c624;Name=39f1c372-c9fd-4fae-a474-a60313c0c624 +### +NC_001416.1_phage_lambda . gene 39572 40283 . + . owner=jason.gill@tamu.edu;Note=added by JJG;ID=07f1dc2a-8b99-4403-b2a1-6f6b1a97a8bf;date_last_modified=2020-05-27;Name=DNA replication protein P;date_creation=2019-02-07 +NC_001416.1_phage_lambda . mRNA 39572 40283 . + . owner=jason.gill@tamu.edu;Parent=07f1dc2a-8b99-4403-b2a1-6f6b1a97a8bf;ID=c093d83e-8530-4a14-8bd8-c53b8a910833;date_last_modified=2020-05-27;Name=DNA replication protein P;date_creation=2019-02-07 +NC_001416.1_phage_lambda . CDS 39582 40283 . + 0 Parent=c093d83e-8530-4a14-8bd8-c53b8a910833;ID=a88b53d4-d4fe-486b-8c84-8398b48e1f6f;Name=a88b53d4-d4fe-486b-8c84-8398b48e1f6f +NC_001416.1_phage_lambda . exon 39572 39575 . + . Parent=c093d83e-8530-4a14-8bd8-c53b8a910833;ID=cedc0d32-5263-4455-bd0f-d764693f70ed;Name=cedc0d32-5263-4455-bd0f-d764693f70ed +NC_001416.1_phage_lambda . exon 39582 40283 . + . Parent=c093d83e-8530-4a14-8bd8-c53b8a910833;ID=82b6f563-6f89-43d1-b98d-f78274587f69;Name=82b6f563-6f89-43d1-b98d-f78274587f69 +### +NC_001416.1_phage_lambda . gene 37227 37957 . - . owner=jason.gill@tamu.edu;Note=added by JJG;ID=a7d2cdab-7fda-4061-8472-1764694f0cd2;date_last_modified=2020-05-27;Name=repressor protein cI;date_creation=2019-02-07 +NC_001416.1_phage_lambda . mRNA 37227 37957 . - . owner=jason.gill@tamu.edu;Parent=a7d2cdab-7fda-4061-8472-1764694f0cd2;ID=2a6b70fd-ae85-42e9-9036-c28e3c2db97d;date_last_modified=2020-05-27;Name=repressor protein cI;date_creation=2019-02-07 +NC_001416.1_phage_lambda . CDS 37227 37940 . - 0 Parent=2a6b70fd-ae85-42e9-9036-c28e3c2db97d;ID=fe515895-1460-4165-a3da-9a54c3af8c8b;Name=fe515895-1460-4165-a3da-9a54c3af8c8b +NC_001416.1_phage_lambda . exon 37227 37940 . - . Parent=2a6b70fd-ae85-42e9-9036-c28e3c2db97d;ID=e39fb5aa-6d49-410c-b866-59176ba7f58e;Name=e39fb5aa-6d49-410c-b866-59176ba7f58e +NC_001416.1_phage_lambda . exon 37955 37957 . - . Parent=2a6b70fd-ae85-42e9-9036-c28e3c2db97d;ID=ed4d4e34-4a7e-445e-8ed9-0398e79e4cca;Name=ed4d4e34-4a7e-445e-8ed9-0398e79e4cca +### +NC_001416.1_phage_lambda . gene 34087 34299 . - . owner=jolenerr@tamu.edu;ID=2a518c27-1014-4987-8c6d-c77d9bd51018;date_last_modified=2020-05-27;Name=restriction alleviation protein ral;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 34087 34299 . - . owner=jolenerr@tamu.edu;Parent=2a518c27-1014-4987-8c6d-c77d9bd51018;ID=49194677-2490-40bd-b0fb-3fb98cc52cf1;date_last_modified=2020-05-27;Name=restriction alleviation protein ral;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 34296 34299 . - . Parent=49194677-2490-40bd-b0fb-3fb98cc52cf1;ID=dff21bf7-bbe3-436e-8f5b-f6d912c0f551;Name=dff21bf7-bbe3-436e-8f5b-f6d912c0f551 +NC_001416.1_phage_lambda . CDS 34087 34287 . - 0 Parent=49194677-2490-40bd-b0fb-3fb98cc52cf1;ID=6328d99f-2767-4c98-b5ee-437a5966f8a4;Name=6328d99f-2767-4c98-b5ee-437a5966f8a4 +NC_001416.1_phage_lambda . exon 34087 34287 . - . Parent=49194677-2490-40bd-b0fb-3fb98cc52cf1;ID=e193bc85-70b1-40fd-a6e9-3db37a3342ec;Name=e193bc85-70b1-40fd-a6e9-3db37a3342ec +### +NC_001416.1_phage_lambda . gene 43875 44509 . + . owner=jolenerr@tamu.edu;ID=1653554c-4be1-453b-a377-86e20759321a;date_last_modified=2020-05-27;Name=late gene regulator;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 43875 44509 . + . owner=jolenerr@tamu.edu;Parent=1653554c-4be1-453b-a377-86e20759321a;ID=8b9e1d18-cb36-449b-a9ae-8e8c3236a4c5;date_last_modified=2020-05-27;Name=late gene regulator;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 43886 44509 . + . Parent=8b9e1d18-cb36-449b-a9ae-8e8c3236a4c5;ID=31c8e3da-388b-423c-b1e0-623182772e8e;Name=31c8e3da-388b-423c-b1e0-623182772e8e +NC_001416.1_phage_lambda . CDS 43886 44509 . + 0 Parent=8b9e1d18-cb36-449b-a9ae-8e8c3236a4c5;ID=2582ce2f-6414-47d7-b648-fa198a5806bb;Name=2582ce2f-6414-47d7-b648-fa198a5806bb +NC_001416.1_phage_lambda . exon 43875 43878 . + . Parent=8b9e1d18-cb36-449b-a9ae-8e8c3236a4c5;ID=b627b58f-ab61-40c2-ae58-964ee6ef0323;Name=b627b58f-ab61-40c2-ae58-964ee6ef0323 +### +NC_001416.1_phage_lambda . gene 27812 28893 . - . owner=jolenerr@tamu.edu;ID=e5536357-eca7-4860-9cc2-daa21051df98;date_last_modified=2020-05-27;Name=integrase int;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 27812 28893 . - . owner=jolenerr@tamu.edu;Parent=e5536357-eca7-4860-9cc2-daa21051df98;ID=4b5c622d-ca3d-4df9-a124-56790bf573df;date_last_modified=2020-05-27;Name=integrase int;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 27812 28882 . - . Parent=4b5c622d-ca3d-4df9-a124-56790bf573df;ID=1afc9e39-cd6d-4ff4-ab77-f007887e4219;Name=1afc9e39-cd6d-4ff4-ab77-f007887e4219 +NC_001416.1_phage_lambda . CDS 27812 28882 . - 0 Parent=4b5c622d-ca3d-4df9-a124-56790bf573df;ID=e47fbbbf-ebfb-43b0-9d74-86b88bd26453;Name=e47fbbbf-ebfb-43b0-9d74-86b88bd26453 +NC_001416.1_phage_lambda . exon 28890 28893 . - . Parent=4b5c622d-ca3d-4df9-a124-56790bf573df;ID=c519ae64-93a1-4258-a0b6-9037a38dcc29;Name=c519ae64-93a1-4258-a0b6-9037a38dcc29 +### +NC_001416.1_phage_lambda . gene 33536 33918 . - . owner=jolenerr@tamu.edu;ID=ac07bd3f-9aff-48b0-a2ec-73ce870dbd62;date_last_modified=2020-05-27;Name=single-stranded DNA binding protein ea10;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 33536 33918 . - . owner=jolenerr@tamu.edu;Parent=ac07bd3f-9aff-48b0-a2ec-73ce870dbd62;ID=36b4a477-56ee-4ad0-8594-2cd30d71e973;date_last_modified=2020-05-27;Name=single-stranded DNA binding protein ea10;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 33915 33918 . - . Parent=36b4a477-56ee-4ad0-8594-2cd30d71e973;ID=bb83a0b4-5396-4f2d-833a-2f6f08cd1af4;Name=bb83a0b4-5396-4f2d-833a-2f6f08cd1af4 +NC_001416.1_phage_lambda . CDS 33536 33904 . - 0 Parent=36b4a477-56ee-4ad0-8594-2cd30d71e973;ID=c1212ac5-d27d-456e-8ca6-364d9d7ce65e;Name=c1212ac5-d27d-456e-8ca6-364d9d7ce65e +NC_001416.1_phage_lambda . exon 33536 33904 . - . Parent=36b4a477-56ee-4ad0-8594-2cd30d71e973;ID=e7c2364d-2ce2-49ac-b92d-e16d8dcb49f3;Name=e7c2364d-2ce2-49ac-b92d-e16d8dcb49f3 +### +NC_001416.1_phage_lambda . gene 45483 45969 . + . owner=jolenerr@tamu.edu;ID=f8ba23df-ca21-4307-8f5a-ef8243f01acc;date_last_modified=2020-05-13;Name=endolysin R;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 45483 45969 . + . owner=jolenerr@tamu.edu;Parent=f8ba23df-ca21-4307-8f5a-ef8243f01acc;ID=768343f7-a182-4995-9cc8-51cfcca69037;date_last_modified=2020-05-13;Name=endolysin R;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 45493 45969 . + 0 Parent=768343f7-a182-4995-9cc8-51cfcca69037;ID=a6425c60-0983-46cb-9073-3e4a15b6b451;Name=a6425c60-0983-46cb-9073-3e4a15b6b451 +NC_001416.1_phage_lambda . exon 45483 45486 . + . Parent=768343f7-a182-4995-9cc8-51cfcca69037;ID=35d1231f-abe9-48d6-aed3-a7e0a6f48aa2;Name=35d1231f-abe9-48d6-aed3-a7e0a6f48aa2 +NC_001416.1_phage_lambda . exon 45493 45969 . + . Parent=768343f7-a182-4995-9cc8-51cfcca69037;ID=399ec6b8-bb00-4d25-9512-41196eb41ae0;Name=399ec6b8-bb00-4d25-9512-41196eb41ae0 +### +NC_001416.1_phage_lambda . gene 5739 6079 . + . owner=jolenerr@tamu.edu;ID=274304d3-079e-4e08-aa11-219235e1aacb;date_last_modified=2020-05-28;Name=capsid decoration protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 5739 6079 . + . owner=jolenerr@tamu.edu;Parent=274304d3-079e-4e08-aa11-219235e1aacb;ID=5291abf0-0be2-4ca3-b473-c5d9549fd211;date_last_modified=2020-05-28;Name=capsid decoration protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 5747 6079 . + . Parent=5291abf0-0be2-4ca3-b473-c5d9549fd211;ID=a2fa2799-0e90-48ed-bf7f-787510296e98;Name=a2fa2799-0e90-48ed-bf7f-787510296e98 +NC_001416.1_phage_lambda . CDS 5747 6079 . + 0 Parent=5291abf0-0be2-4ca3-b473-c5d9549fd211;ID=c0b0cccc-6c4f-40e6-a0cc-a26f912095af;Name=c0b0cccc-6c4f-40e6-a0cc-a26f912095af +NC_001416.1_phage_lambda . exon 5739 5741 . + . Parent=5291abf0-0be2-4ca3-b473-c5d9549fd211;ID=83533bb7-60ed-4f77-8f11-fe4fd4973280;Name=83533bb7-60ed-4f77-8f11-fe4fd4973280 +### +NC_001416.1_phage_lambda . gene 21961 22557 . + . owner=jolenerr@tamu.edu;ID=8f5752d0-2f43-4b81-94a6-e2bcf0119d63;date_last_modified=2020-05-27;Name=tail fiber assembly protein tfa;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 21961 22557 . + . owner=jolenerr@tamu.edu;Parent=8f5752d0-2f43-4b81-94a6-e2bcf0119d63;ID=e89cf686-4697-4a40-b3d0-f52dedf6aa66;date_last_modified=2020-05-27;Name=tail fiber assembly protein tfa;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 21973 22557 . + . Parent=e89cf686-4697-4a40-b3d0-f52dedf6aa66;ID=420813b5-5e3f-406c-9559-59a368b53626;Name=420813b5-5e3f-406c-9559-59a368b53626 +NC_001416.1_phage_lambda . CDS 21973 22557 . + 0 Parent=e89cf686-4697-4a40-b3d0-f52dedf6aa66;ID=76b16353-7dde-4879-98a3-6d2b585f354c;Name=76b16353-7dde-4879-98a3-6d2b585f354c +NC_001416.1_phage_lambda . exon 21961 21964 . + . Parent=e89cf686-4697-4a40-b3d0-f52dedf6aa66;ID=323f0a04-b051-48e2-9594-ba051d331bfc;Name=323f0a04-b051-48e2-9594-ba051d331bfc +### +NC_001416.1_phage_lambda . gene 41950 42123 . + . owner=jolenerr@tamu.edu;ID=c402b694-7971-451b-aa24-4e70550eef2d;date_last_modified=2020-05-13;Name=NinD;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 41950 42123 . + . owner=jolenerr@tamu.edu;Parent=c402b694-7971-451b-aa24-4e70550eef2d;ID=e60d828b-b3ad-420d-b6a3-bb4379c52368;date_last_modified=2020-05-13;Name=NinD-00001;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 41950 42123 . + . Parent=e60d828b-b3ad-420d-b6a3-bb4379c52368;ID=1f833602-0050-4fa0-9b4c-a65801ce7d07;Name=1f833602-0050-4fa0-9b4c-a65801ce7d07 +NC_001416.1_phage_lambda . CDS 41950 42123 . + 0 Parent=e60d828b-b3ad-420d-b6a3-bb4379c52368;ID=fb4c57c5-eceb-458a-879a-bc3731364776;Name=fb4c57c5-eceb-458a-879a-bc3731364776 +### +NC_001416.1_phage_lambda . gene 47518 47652 . + . owner=jolenerr@tamu.edu;ID=752f31a0-018a-4223-a7f9-72685604b7a3;date_last_modified=2020-05-13;Name=CDS.0.864_0.667986446525;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 47518 47652 . + . owner=jolenerr@tamu.edu;Parent=752f31a0-018a-4223-a7f9-72685604b7a3;ID=3d0dbb37-9edd-4cb8-b2e1-ff7b67a0aeb0;date_last_modified=2020-05-13;Name=CDS.0.864_0.667986446525-00001;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 47530 47652 . + 0 Parent=3d0dbb37-9edd-4cb8-b2e1-ff7b67a0aeb0;ID=8828d5c3-ad44-47e3-ad5b-e27bf11a2330;Name=8828d5c3-ad44-47e3-ad5b-e27bf11a2330 +NC_001416.1_phage_lambda . exon 47518 47520 . + . Parent=3d0dbb37-9edd-4cb8-b2e1-ff7b67a0aeb0;ID=d96be208-50dc-411f-90b4-3122998995aa;Name=d96be208-50dc-411f-90b4-3122998995aa +NC_001416.1_phage_lambda . exon 47530 47652 . + . Parent=3d0dbb37-9edd-4cb8-b2e1-ff7b67a0aeb0;ID=30e5068d-a5e7-4eac-8574-4018f387dfd7;Name=30e5068d-a5e7-4eac-8574-4018f387dfd7 +### +NC_001416.1_phage_lambda . gene 22686 23928 . - . owner=jolenerr@tamu.edu;ID=89aa3485-6819-4bee-a970-3661cfed1c7a;date_last_modified=2020-05-27;Name=protein ea47;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 22686 23928 . - . owner=jolenerr@tamu.edu;Parent=89aa3485-6819-4bee-a970-3661cfed1c7a;ID=e73930b6-5663-4ff7-846e-8f97cbeaf348;date_last_modified=2020-05-27;Name=protein ea47;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 22686 23918 . - 0 Parent=e73930b6-5663-4ff7-846e-8f97cbeaf348;ID=b94c5716-41b7-45a6-ab35-0c33701186d9;Name=b94c5716-41b7-45a6-ab35-0c33701186d9 +NC_001416.1_phage_lambda . exon 23925 23928 . - . Parent=e73930b6-5663-4ff7-846e-8f97cbeaf348;ID=a47ef493-6a83-47f1-b234-34c65ca6dc12;Name=a47ef493-6a83-47f1-b234-34c65ca6dc12 +NC_001416.1_phage_lambda . exon 22686 23918 . - . Parent=e73930b6-5663-4ff7-846e-8f97cbeaf348;ID=5b1267a0-d83d-4826-96d2-db3b324411b9;Name=5b1267a0-d83d-4826-96d2-db3b324411b9 +### +NC_001416.1_phage_lambda . gene 33299 33474 . - . owner=jolenerr@tamu.edu;ID=00bbe7b0-4092-4355-ba1e-7204fd13953f;date_last_modified=2020-05-27;Name=protease inhibitor cIII;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 33299 33474 . - . owner=jolenerr@tamu.edu;Parent=00bbe7b0-4092-4355-ba1e-7204fd13953f;ID=376b98ed-a1a0-455d-8bce-2ac01e318b81;date_last_modified=2020-05-27;Name=protease inhibitor cIII;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 33299 33463 . - 0 Parent=376b98ed-a1a0-455d-8bce-2ac01e318b81;ID=eed5de14-9eeb-4627-827e-6164039db457;Name=eed5de14-9eeb-4627-827e-6164039db457 +NC_001416.1_phage_lambda . exon 33470 33474 . - . Parent=376b98ed-a1a0-455d-8bce-2ac01e318b81;ID=e3aa8106-b39b-4fcc-bb58-2b5119f2c0c2;Name=e3aa8106-b39b-4fcc-bb58-2b5119f2c0c2 +NC_001416.1_phage_lambda . exon 33299 33463 . - . Parent=376b98ed-a1a0-455d-8bce-2ac01e318b81;ID=c9b7b672-cf54-4805-a74d-667c06f91556;Name=c9b7b672-cf54-4805-a74d-667c06f91556 +### +NC_001416.1_phage_lambda . gene 18955 19585 . + . owner=jolenerr@tamu.edu;ID=118de905-477c-4bf5-bb2d-1f5b336820bb;date_last_modified=2020-05-27;Name=outer membrane protein lom;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 18955 19585 . + . owner=jolenerr@tamu.edu;Parent=118de905-477c-4bf5-bb2d-1f5b336820bb;ID=5c442aaa-2584-47b7-9d76-b41904dac22c;date_last_modified=2020-05-27;Name=outer membrane protein lom;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 18955 18959 . + . Parent=5c442aaa-2584-47b7-9d76-b41904dac22c;ID=643a2ecb-88cb-492e-9180-8c8050484d0b;Name=643a2ecb-88cb-492e-9180-8c8050484d0b +NC_001416.1_phage_lambda . CDS 18965 19585 . + 0 Parent=5c442aaa-2584-47b7-9d76-b41904dac22c;ID=f4957e8b-58a9-4b10-a71f-f2b66c7fdfa9;Name=f4957e8b-58a9-4b10-a71f-f2b66c7fdfa9 +NC_001416.1_phage_lambda . exon 18965 19585 . + . Parent=5c442aaa-2584-47b7-9d76-b41904dac22c;ID=35e21ecd-297b-4bf0-a720-39937f6266a6;Name=35e21ecd-297b-4bf0-a720-39937f6266a6 +### +NC_001416.1_phage_lambda . gene 24095 24298 . - . owner=jolenerr@tamu.edu;ID=f04bb9e0-6bb0-48d2-8ac8-8c5eb517d555;date_last_modified=2020-10-08;Name=hypothetical protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 24095 24298 . - . owner=jolenerr@tamu.edu;Parent=f04bb9e0-6bb0-48d2-8ac8-8c5eb517d555;ID=58dd1552-be77-465d-964e-6b545e3d36ed;date_last_modified=2020-05-27;Name=hypothetical protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 24296 24298 . - . Parent=58dd1552-be77-465d-964e-6b545e3d36ed;ID=8d2474f6-3fab-48ba-8fd1-c2237f12abe8;Name=8d2474f6-3fab-48ba-8fd1-c2237f12abe8 +NC_001416.1_phage_lambda . CDS 24095 24286 . - 0 Parent=58dd1552-be77-465d-964e-6b545e3d36ed;ID=04c56909-8c23-4041-beaf-3e88907317ba;Name=04c56909-8c23-4041-beaf-3e88907317ba +NC_001416.1_phage_lambda . exon 24095 24286 . - . Parent=58dd1552-be77-465d-964e-6b545e3d36ed;ID=5e4ab25a-8d24-4f9e-832d-b375efc0c119;Name=5e4ab25a-8d24-4f9e-832d-b375efc0c119 +### +NC_001416.1_phage_lambda . gene 32025 32824 . - . owner=jolenerr@tamu.edu;ID=cd896736-3fb2-4826-b8db-d3966b3b8606;date_last_modified=2020-05-27;Name=recombination protein bet;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 32025 32824 . - . owner=jolenerr@tamu.edu;Parent=cd896736-3fb2-4826-b8db-d3966b3b8606;ID=421c0b04-05b7-4ab9-886c-45e26cd44c3c;date_last_modified=2020-05-27;Name=recombination protein bet;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 32820 32824 . - . Parent=421c0b04-05b7-4ab9-886c-45e26cd44c3c;ID=3c504bc4-41c5-4c83-813c-2eca78772290;Name=3c504bc4-41c5-4c83-813c-2eca78772290 +NC_001416.1_phage_lambda . exon 32025 32810 . - . Parent=421c0b04-05b7-4ab9-886c-45e26cd44c3c;ID=387bfbdc-7e3e-4900-bffc-ea8accad2acf;Name=387bfbdc-7e3e-4900-bffc-ea8accad2acf +NC_001416.1_phage_lambda . CDS 32025 32810 . - 0 Parent=421c0b04-05b7-4ab9-886c-45e26cd44c3c;ID=a402c855-b812-408c-adfa-b7d0caf2c2d3;Name=a402c855-b812-408c-adfa-b7d0caf2c2d3 +### +NC_001416.1_phage_lambda . gene 38676 39585 . + . owner=jason.gill@tamu.edu;Note=added by JJG;ID=3e912c73-4cba-4590-8d03-357bbef2da31;date_last_modified=2020-05-27;Name=DNA replication protein O;date_creation=2019-02-07 +NC_001416.1_phage_lambda . mRNA 38676 39585 . + . owner=jason.gill@tamu.edu;Parent=3e912c73-4cba-4590-8d03-357bbef2da31;ID=8babdb56-7c98-4fd6-ba93-b089e963de4a;date_last_modified=2020-05-27;Name=DNA replication protein O;date_creation=2019-02-07 +NC_001416.1_phage_lambda . exon 38686 39585 . + . Parent=8babdb56-7c98-4fd6-ba93-b089e963de4a;ID=012dab8a-a670-490a-a6fe-6fba4f1ac62d;Name=012dab8a-a670-490a-a6fe-6fba4f1ac62d +NC_001416.1_phage_lambda . exon 38676 38680 . + . Parent=8babdb56-7c98-4fd6-ba93-b089e963de4a;ID=15ce9184-a982-4a2c-83fb-50221a792594;Name=15ce9184-a982-4a2c-83fb-50221a792594 +NC_001416.1_phage_lambda . CDS 38686 39585 . + 0 Parent=8babdb56-7c98-4fd6-ba93-b089e963de4a;ID=6e430049-fd3c-4024-9054-671faeb12174;Name=6e430049-fd3c-4024-9054-671faeb12174 +### +NC_001416.1_phage_lambda . gene 42230 42439 . + . owner=jolenerr@tamu.edu;ID=49135134-fa86-4df5-a0d7-b629ff152305;date_last_modified=2020-05-13;Name=CDS.0.1596_0.0419290277112;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 42230 42439 . + . owner=jolenerr@tamu.edu;Parent=49135134-fa86-4df5-a0d7-b629ff152305;ID=24a9d5e2-d328-4063-8d42-b31682095a8b;date_last_modified=2020-05-13;Name=CDS.0.1596_0.0419290277112-00001;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 42239 42439 . + 0 Parent=24a9d5e2-d328-4063-8d42-b31682095a8b;ID=d1f227de-1e98-4c30-93b4-4ace8c4cc792;Name=d1f227de-1e98-4c30-93b4-4ace8c4cc792 +NC_001416.1_phage_lambda . exon 42230 42232 . + . Parent=24a9d5e2-d328-4063-8d42-b31682095a8b;ID=9c545899-d7d5-4b58-b8db-e170d172cee2;Name=9c545899-d7d5-4b58-b8db-e170d172cee2 +NC_001416.1_phage_lambda . exon 42239 42439 . + . Parent=24a9d5e2-d328-4063-8d42-b31682095a8b;ID=2669ee80-51fb-478b-b72e-cd4c8234bd7b;Name=2669ee80-51fb-478b-b72e-cd4c8234bd7b +### +NC_001416.1_phage_lambda . gene 14758 15444 . + . owner=jolenerr@tamu.edu;ID=8a865779-0ec1-43bd-a34a-ab74912cf03a;date_last_modified=2020-05-27;Name=tail tip assembly protein I;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 14758 15444 . + . owner=jolenerr@tamu.edu;Parent=8a865779-0ec1-43bd-a34a-ab74912cf03a;ID=b5e527ae-aa6e-4aa1-883f-3086a433dc43;date_last_modified=2020-05-27;Name=tail tip assembly protein I;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 14773 15444 . + 0 Parent=b5e527ae-aa6e-4aa1-883f-3086a433dc43;ID=d30e4704-8c19-43ea-9c50-697ff1b9c846;Name=d30e4704-8c19-43ea-9c50-697ff1b9c846 +NC_001416.1_phage_lambda . exon 14758 14762 . + . Parent=b5e527ae-aa6e-4aa1-883f-3086a433dc43;ID=a5410317-0a11-4033-9acd-5532665ab594;Name=a5410317-0a11-4033-9acd-5532665ab594 +NC_001416.1_phage_lambda . exon 14773 15444 . + . Parent=b5e527ae-aa6e-4aa1-883f-3086a433dc43;ID=b558d0ff-dc6a-4575-a56a-e7950f194b35;Name=b558d0ff-dc6a-4575-a56a-e7950f194b35 +### +NC_001416.1_phage_lambda . gene 7173 7600 . + . owner=jolenerr@tamu.edu;ID=4da662d1-028a-43e2-9b50-f48ad03bdd64;date_last_modified=2020-05-27;Name=DNA packaging protein FI;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 7173 7600 . + . owner=jolenerr@tamu.edu;Parent=4da662d1-028a-43e2-9b50-f48ad03bdd64;ID=f24b7879-d169-451b-9c3f-063e60b202c6;date_last_modified=2020-05-27;Name=DNA packaging protein FI;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 7190 7600 . + . Parent=f24b7879-d169-451b-9c3f-063e60b202c6;ID=5917612c-ffa3-493d-bc8b-b63edc24233d;Name=5917612c-ffa3-493d-bc8b-b63edc24233d +NC_001416.1_phage_lambda . CDS 7190 7600 . + 0 Parent=f24b7879-d169-451b-9c3f-063e60b202c6;ID=64c7400f-98fa-43c2-947f-80da6c0f906b;Name=64c7400f-98fa-43c2-947f-80da6c0f906b +NC_001416.1_phage_lambda . exon 7173 7176 . + . Parent=f24b7879-d169-451b-9c3f-063e60b202c6;ID=3458a11e-8e51-4ca6-9469-6afda43de4a7;Name=3458a11e-8e51-4ca6-9469-6afda43de4a7 +### +NC_001416.1_phage_lambda . gene 30712 30894 . - . owner=jolenerr@tamu.edu;ID=3302e865-ca96-48ab-a043-66d0b2d464a9;date_last_modified=2020-05-27;Name=hypothetical membrane protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 30712 30894 . - . owner=jolenerr@tamu.edu;Parent=3302e865-ca96-48ab-a043-66d0b2d464a9;ID=45f32120-73fd-43f4-9158-bc933b4816de;date_last_modified=2020-05-27;Name=hypothetical membrane protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 30712 30894 . - . Parent=45f32120-73fd-43f4-9158-bc933b4816de;ID=c02fdc79-ed03-481d-a8d0-e469c1afcc1f;Name=c02fdc79-ed03-481d-a8d0-e469c1afcc1f +NC_001416.1_phage_lambda . CDS 30712 30894 . - 0 Parent=45f32120-73fd-43f4-9158-bc933b4816de;ID=811436d3-a80b-470a-979d-5516b6169cfd;Name=811436d3-a80b-470a-979d-5516b6169cfd +### +NC_001416.1_phage_lambda . gene 44612 44815 . + . owner=jolenerr@tamu.edu;ID=6c3ab9c5-a407-47b8-89df-fa997262a409;date_last_modified=2020-05-13;Name=CDS.0.1630_0.132755174165;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 44612 44815 . + . owner=jolenerr@tamu.edu;Parent=6c3ab9c5-a407-47b8-89df-fa997262a409;ID=fb56134e-8d15-4270-90d9-47546f3c30ff;date_last_modified=2020-05-13;Name=CDS.0.1630_0.132755174165-00001;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 44612 44614 . + . Parent=fb56134e-8d15-4270-90d9-47546f3c30ff;ID=5a605a7b-70a8-4e29-a08b-3d9079d2dd24;Name=5a605a7b-70a8-4e29-a08b-3d9079d2dd24 +NC_001416.1_phage_lambda . CDS 44621 44815 . + 0 Parent=fb56134e-8d15-4270-90d9-47546f3c30ff;ID=6e1b8591-07a8-478c-97ea-2a14334f5805;Name=6e1b8591-07a8-478c-97ea-2a14334f5805 +NC_001416.1_phage_lambda . exon 44621 44815 . + . Parent=fb56134e-8d15-4270-90d9-47546f3c30ff;ID=2579ead4-8ff6-46c3-847d-707c54e05797;Name=2579ead4-8ff6-46c3-847d-707c54e05797 +### +NC_001416.1_phage_lambda . gene 30839 31024 . - . owner=jolenerr@tamu.edu;ID=4a0ceaca-089f-42a3-9185-c5e89f11b935;date_last_modified=2020-05-27;Name=hypothetical protein orf61;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 30839 31011 . - . owner=jolenerr@tamu.edu;Parent=4a0ceaca-089f-42a3-9185-c5e89f11b935;ID=aba10fe1-f543-455d-b740-acd3d5fddcce;date_last_modified=2020-05-27;Name=hypothetical protein orf61;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 30839 30994 . - 0 Parent=aba10fe1-f543-455d-b740-acd3d5fddcce;ID=e17c9145-eece-4771-8d5f-bf2342e0f550;Name=e17c9145-eece-4771-8d5f-bf2342e0f550 +NC_001416.1_phage_lambda . exon 30839 30994 . - . Parent=aba10fe1-f543-455d-b740-acd3d5fddcce;ID=255ac835-10e5-4756-ae1e-c2d8f80ffa6d;Name=255ac835-10e5-4756-ae1e-c2d8f80ffa6d +NC_001416.1_phage_lambda . exon 31009 31011 . - . Parent=aba10fe1-f543-455d-b740-acd3d5fddcce;ID=a0806ba0-7f44-4bbb-a5ab-8a21d00ba1e0;Name=a0806ba0-7f44-4bbb-a5ab-8a21d00ba1e0 +### +NC_001416.1_phage_lambda . gene 38031 38241 . + . owner=jason.gill@tamu.edu;Note=added by JJG;ID=d731b2bf-e9f9-484f-8851-814510c6a5ec;date_last_modified=2020-05-27;Name=regulatory protein cro;date_creation=2019-02-07 +NC_001416.1_phage_lambda . mRNA 38031 38241 . + . owner=jason.gill@tamu.edu;Parent=d731b2bf-e9f9-484f-8851-814510c6a5ec;ID=5cfd706b-b814-43f9-b604-fc8c179f853a;date_last_modified=2020-05-27;Name=regulatory protein cro;date_creation=2019-02-07 +NC_001416.1_phage_lambda . exon 38031 38035 . + . Parent=5cfd706b-b814-43f9-b604-fc8c179f853a;ID=041be549-96a8-42a3-b5eb-258ebb4ffd5f;Name=041be549-96a8-42a3-b5eb-258ebb4ffd5f +NC_001416.1_phage_lambda . CDS 38041 38241 . + 0 Parent=5cfd706b-b814-43f9-b604-fc8c179f853a;ID=97688d3e-13d8-48fd-9e05-2d919293f914;Name=97688d3e-13d8-48fd-9e05-2d919293f914 +NC_001416.1_phage_lambda . exon 38041 38241 . + . Parent=5cfd706b-b814-43f9-b604-fc8c179f853a;ID=e6686b84-108a-4c8f-a5b9-64b92b6dc5b5;Name=e6686b84-108a-4c8f-a5b9-64b92b6dc5b5 +### +NC_001416.1_phage_lambda . gene 38345 38653 . + . owner=jason.gill@tamu.edu;Note=added by JJG;ID=1b331cf3-0897-4489-aa55-b14669ea5998;date_last_modified=2020-05-27;Name=regulatory protein cII;date_creation=2019-02-07 +NC_001416.1_phage_lambda . mRNA 38345 38653 . + . owner=jason.gill@tamu.edu;Parent=1b331cf3-0897-4489-aa55-b14669ea5998;ID=b970dd3f-9787-459c-84ed-5b839b85b9e7;date_last_modified=2020-05-27;Name=regulatory protein cII;date_creation=2019-02-07 +NC_001416.1_phage_lambda . CDS 38360 38653 . + 0 Parent=b970dd3f-9787-459c-84ed-5b839b85b9e7;ID=c4ae3e6a-4e56-412d-8ece-0036053910ef;Name=c4ae3e6a-4e56-412d-8ece-0036053910ef +NC_001416.1_phage_lambda . exon 38360 38653 . + . Parent=b970dd3f-9787-459c-84ed-5b839b85b9e7;ID=c29fe89e-348d-4da7-b313-85c362f92307;Name=c29fe89e-348d-4da7-b313-85c362f92307 +NC_001416.1_phage_lambda . exon 38345 38348 . + . Parent=b970dd3f-9787-459c-84ed-5b839b85b9e7;ID=b2199555-1cbb-443c-92d3-fa5a0a17670e;Name=b2199555-1cbb-443c-92d3-fa5a0a17670e +### +NC_001416.1_phage_lambda . gene 30392 30626 . - . owner=jolenerr@tamu.edu;Note=Contains InterPro domain IPR000962;ID=4fba3f9c-cbc0-4454-b278-efe088695fef;date_last_modified=2020-05-27;Name=DksA/TraR C4-type zinc finger domain-containing protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 30392 30626 . - . owner=jolenerr@tamu.edu;Parent=4fba3f9c-cbc0-4454-b278-efe088695fef;ID=7dfc2c2d-a50d-4e77-b673-2dcd16c2ef3b;date_last_modified=2020-05-27;Name=DksA/TraR C4-type zinc finger domain-containing protein;date_creation=2020-05-13 +NC_001416.1_phage_lambda . exon 30624 30626 . - . Parent=7dfc2c2d-a50d-4e77-b673-2dcd16c2ef3b;ID=cbf0bbe9-fdae-426f-a6ce-40926606c1ca;Name=cbf0bbe9-fdae-426f-a6ce-40926606c1ca +NC_001416.1_phage_lambda . CDS 30392 30613 . - 0 Parent=7dfc2c2d-a50d-4e77-b673-2dcd16c2ef3b;ID=1fa7e4a7-9200-45d9-b9fd-21e36b254897;Name=1fa7e4a7-9200-45d9-b9fd-21e36b254897 +NC_001416.1_phage_lambda . exon 30392 30613 . - . Parent=7dfc2c2d-a50d-4e77-b673-2dcd16c2ef3b;ID=529064a4-a072-48ec-bd67-0eb3011ae53c;Name=529064a4-a072-48ec-bd67-0eb3011ae53c +### +NC_001416.1_phage_lambda . gene 46174 46368 . + . owner=jolenerr@tamu.edu;ID=18e578e1-38cb-4846-96e8-0190a5a26369;date_last_modified=2020-05-13;Name=o-spanin Rz1;date_creation=2020-05-13 +NC_001416.1_phage_lambda . mRNA 46174 46368 . + . owner=jolenerr@tamu.edu;Parent=18e578e1-38cb-4846-96e8-0190a5a26369;ID=b4c199b2-1838-43c0-a09d-77718a49dbe2;date_last_modified=2020-05-13;Name=o-spanin Rz1;date_creation=2020-05-13 +NC_001416.1_phage_lambda . CDS 46186 46368 . + 0 Parent=b4c199b2-1838-43c0-a09d-77718a49dbe2;ID=7ac7bb1c-0d6d-4476-8a02-8ad963da6156;Name=7ac7bb1c-0d6d-4476-8a02-8ad963da6156 +NC_001416.1_phage_lambda . exon 46174 46178 . + . Parent=b4c199b2-1838-43c0-a09d-77718a49dbe2;ID=668e24d1-fcea-459e-bbf3-6132bbb9854e;Name=668e24d1-fcea-459e-bbf3-6132bbb9854e +NC_001416.1_phage_lambda . exon 46186 46368 . + . Parent=b4c199b2-1838-43c0-a09d-77718a49dbe2;ID=f8d07a76-6f8d-4100-9ba6-cec0e3a033f9;Name=f8d07a76-6f8d-4100-9ba6-cec0e3a033f9 diff -r 000000000000 -r 6a4d1bd8ac1d cpt_annotation_table/test-data/PhageTable_Out.html --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cpt_annotation_table/test-data/PhageTable_Out.html Fri Jun 17 12:19:58 2022 +0000 @@ -0,0 +1,2124 @@ + + + + + + + + + + Annotation Table + + + + + + + + + + + + + + + +
+
+
+ + + +
+
+ Data on each organism will be accessible from the tabs above. +
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Organism IDIDTypeNameLocationBoundaryBoundaryStrandCDS Length (AA)Shine-Dalgarno sequenceShine-Dalgarno spacingStart CodonStop CodonDistance to next upstream gene on same strandNext gene upstreamOwnerCreatedLast ModifiedUser entered NotesDescriptionProductDBxrefs
NC_001416-1_phage_lambda1185c0aa-14c4-45c3-ab0d-889bbfdbf137geneterminase small subunit181..736181736+181GGA7ATGTAANoneNonejolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda6d452f5a-9508-40c1-9d43-d98831ca8919geneterminase large subunit701..26367012636+641GGGT6GTGTGA-361185c0aa-14c4-45c3-ab0d-889bbfdbf137jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda38175e36-b9e9-48ea-9d1c-7f115fae7194genehead completion protein2622..283926222839+68GGAG7ATGTGA-156d452f5a-9508-40c1-9d43-d98831ca8919jolenerr@tamu.edu2020-05-132020-05-28InterPro domain IPR004174NoneNoneNone
NC_001416-1_phage_lambda0695da41-cce8-4f07-a27a-eb42ac82ae56geneportal protein B2824..443728244437+533AGGA8ATGTAA-1638175e36-b9e9-48ea-9d1c-7f115fae7194jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda422aab41-ac49-4818-b87e-9331023dcacfgenecapsid assembly protein4406..573744065737+673
  • GGAG, AGGAGG
  • -609, 6
  • GTG (4417..5737:1), GTG (5035..5737:1)
TAA-320695da41-cce8-4f07-a27a-eb42ac82ae56jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda274304d3-079e-4e08-aa11-219235e1aacbgenecapsid decoration protein5739..607957396079+110GGA5ATGTAA1422aab41-ac49-4818-b87e-9331023dcacfjolenerr@tamu.edu2020-05-132020-05-28NoneNoneNoneNone
NC_001416-1_phage_lambda4f815f9e-5092-4db3-b722-0d912c116293genemajor capsid protein6099..716060997160+350AGG6GTGTAA19274304d3-079e-4e08-aa11-219235e1aacbjolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda4da662d1-028a-43e2-9b50-f48ad03bdd64geneDNA packaging protein FI7173..760071737600+136GGGG13GTGTAA124f815f9e-5092-4db3-b722-0d912c116293jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda638d1ac5-aea4-4988-b46d-01cf79793dfbgenehead-tail connector protein FII7603..796576037965+117GGAG5GTGTGA24da662d1-028a-43e2-9b50-f48ad03bdd64jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambdab541056e-bf91-4113-bce7-86bab4d27f76genetail completion protein Z7968..855579688555+192GGGG5ATGTGA2638d1ac5-aea4-4988-b46d-01cf79793dfbjolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambdafca8745c-c433-4845-9430-c8a9dd4dc37bgenetail tube terminator protein U8535..894785358947+131AGGA13ATGTGA-21b541056e-bf91-4113-bce7-86bab4d27f76jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambdad9ee7b0e-b4a7-48cf-8c4b-aa95ca8863e0genetail tube protein V8946..969589469695+246GAGG5ATGTAA-2fca8745c-c433-4845-9430-c8a9dd4dc37bjolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda0b5a859a-39f6-4c49-91b7-0b2def466374genetape measure chaperone GT9699..10133969910133+275
  • GGAG, GGAG
  • 8, 8
  • ATG (9710..10133:1), ATG (9710..10115:1)
TGA3d9ee7b0e-b4a7-48cf-8c4b-aa95ca8863e0jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambdac6a11d3b-7b9d-446f-ba16-3a642f3f6fbdgenetape measure chaperone GT10115..105491011510549+144NoneNoneGTGTGA-190b5a859a-39f6-4c49-91b7-0b2def466374jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda7ef9ffad-d420-4a1c-9a8d-2312dc04b558genetape measure protein H10528..131031052813103+853AGGAGG8ATGTGA-22c6a11d3b-7b9d-446f-ba16-3a642f3f6fbdjolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda55fe46da-9e0e-4454-aff9-f9a12c0a2da4genetail tip protein M13089..134291308913429+109GGAGGT5ATGTGA-157ef9ffad-d420-4a1c-9a8d-2312dc04b558jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda11a10b01-003c-4900-aae9-46139ae23652genetail tip protein L13416..141271341614127+232AGGT9ATGTAA-1455fe46da-9e0e-4454-aff9-f9a12c0a2da4jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambdacdb58372-2440-4e07-bcc4-739e0aba461fgenetail tip assembly protein K14261..148751426114875+199GGAGG10ATGTGA13311a10b01-003c-4900-aae9-46139ae23652jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda8a865779-0ec1-43bd-a34a-ab74912cf03agenetail tip assembly protein I14758..154441475815444+223GAGGT10ATGTGA-118cdb58372-2440-4e07-bcc4-739e0aba461fjolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambdaaf1a2402-fb19-4abe-9a0b-b3e9dc613524genetip attachment protein J15493..189031549318903+1132GGAG8ATGTGA488a865779-0ec1-43bd-a34a-ab74912cf03ajolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda118de905-477c-4bf5-bb2d-1f5b336820bbgeneouter membrane protein lom18955..195851895519585+206GAGGT5ATGTGA51af1a2402-fb19-4abe-9a0b-b3e9dc613524jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambdae7267f7d-4717-4e28-a1a0-564b10661248genetail fiber protein stf19641..208551964120855+401GGGG5ATGTGA55118de905-477c-4bf5-bb2d-1f5b336820bbjolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda9ffb2fcd-96b9-4606-8d3c-c1be0cf0fc5bgenetail fiber protein stf20852..219732085221973+373NoneNoneCTGTAA-4e7267f7d-4717-4e28-a1a0-564b10661248jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda8f5752d0-2f43-4b81-94a6-e2bcf0119d63genetail fiber assembly protein tfa21961..225572196122557+194GAGG8ATGTAA-139ffb2fcd-96b9-4606-8d3c-c1be0cf0fc5bjolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda89aa3485-6819-4bee-a970-3661cfed1c7ageneprotein ea4722686..239282268623928-410GGAG6ATGTGA166f04bb9e0-6bb0-48d2-8ac8-8c5eb517d555jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambdaf04bb9e0-6bb0-48d2-8ac8-8c5eb517d555genehypothetical protein24095..242982409524298-63GGT9GTGTAA210a638e771-ca1f-4058-93a6-b9bddffd0bf8jolenerr@tamu.edu2020-05-132020-10-08NoneNoneNoneNone
NC_001416-1_phage_lambdaa638e771-ca1f-4058-93a6-b9bddffd0bf8geneHNH endonuclease ea3124509..254112450925411-296AGGT8ATGTAG-1627a0e836-ee65-4d75-9d88-2d63b4a28b93jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda27a0e836-ee65-4d75-9d88-2d63b4a28b93genenuclease ea5925396..269832539626983-525GGGT6ATGTGA460ae844fd4-9b05-485e-a49a-61b6ec9f291ajolenerr@tamu.edu2020-05-132020-05-27PMID 8052130NoneNoneNone
NC_001416-1_phage_lambdaae844fd4-9b05-485e-a49a-61b6ec9f291ageneCDS.0.4499_0.26612790860527444..275692744427569-38AGGT5TTGTAA242e5536357-eca7-4860-9cc2-daa21051df98jolenerr@tamu.edu2020-05-272020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambdae5536357-eca7-4860-9cc2-daa21051df98geneintegrase int27812..288932781228893-356GAGG7ATGTAA-34016016bc-f3b9-4c48-982e-b463960d3a59jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda016016bc-f3b9-4c48-982e-b463960d3a59geneexcisionase Xis28860..290902886029090-72GGAG8ATGTGA27e15c9216-cdbd-4539-879b-9ab30db54d25jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambdae15c9216-cdbd-4539-879b-9ab30db54d25genehypothetical protein29118..292962911829296-55GGAG7ATGTGA77375742bf-c4c9-46e2-b49c-3db72351ae5djolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda375742bf-c4c9-46e2-b49c-3db72351ae5dgeneprotein ea8.529374..296672937429667-93AGGAG7ATGTAA179c3708fda-012f-40ac-91d0-96ce2b9bc845jolenerr@tamu.edu2020-05-132020-05-27Contains CATH G3DSA:1.10.10.1920 with putative hydrolase domainNoneNoneNone
NC_001416-1_phage_lambdac3708fda-012f-40ac-91d0-96ce2b9bc845geneprotein ea2229847..304052984730405-182GAGGT5GTGTGA-144fba3f9c-cbc0-4454-b278-efe088695fefjolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda4fba3f9c-cbc0-4454-b278-efe088695fefgeneDksA/TraR C4-type zinc finger domain-containing protein30392..306263039230626-73GGA10ATGTGA853302e865-ca96-48ab-a043-66d0b2d464a9jolenerr@tamu.edu2020-05-132020-05-27Contains InterPro domain IPR000962NoneNoneNone
NC_001416-1_phage_lambda3302e865-ca96-48ab-a043-66d0b2d464a9genehypothetical membrane protein30712..308943071230894-60NoneNoneTTGTGA-564a0ceaca-089f-42a3-9185-c5e89f11b935jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda4a0ceaca-089f-42a3-9185-c5e89f11b935genehypothetical protein orf6130839..310243083931024-51GGT14ATGTAA-2097f8a88b-c50d-4710-9ae1-a8dad5ccc83fjolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda97f8a88b-c50d-4710-9ae1-a8dad5ccc83fgenehypothetical protein31005..312063100531206-63GAGG6ATGTGA-382cc7e0fe-b058-4773-ab3d-e94e32ff3c69jolenerr@tamu.edu2020-05-132020-05-27Contains InterPro domain IPR009814 with DUF1382NoneNoneNone
NC_001416-1_phage_lambda2cc7e0fe-b058-4773-ab3d-e94e32ff3c69genehypothetical protein31169..313653116931365-62GGG5ATGTAA-18645d965c-2694-421e-8b95-d800a857c890jolenerr@tamu.edu2020-05-132020-05-27Contains InterPro domain IPR009750 DUF1317NoneNoneNone
NC_001416-1_phage_lambda645d965c-2694-421e-8b95-d800a857c890geneexonuclease exo31348..320383134832038-226AGGT6ATGTGA-14cd896736-3fb2-4826-b8db-d3966b3b8606jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambdacd896736-3fb2-4826-b8db-d3966b3b8606generecombination protein bet32025..328243202532824-261GAGGT9ATGTGA-9411ff345-0c28-4335-a864-560ee4fc66c6jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda411ff345-0c28-4335-a864-560ee4fc66c6genehost-nuclease inhibitor protein gam32816..331243281633124-98AGGAG7ATGTAA62dedaa85a-5d65-4faf-a809-97c9a0ca52a8jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambdadedaa85a-5d65-4faf-a809-97c9a0ca52a8genehost-killing protein kil33187..333443318733344-47AGGAG9ATGTAA-4600bbe7b0-4092-4355-ba1e-7204fd13953fjolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda00bbe7b0-4092-4355-ba1e-7204fd13953fgeneprotease inhibitor cIII33299..334743329933474-54AGGAG6ATGTAA61ac07bd3f-9aff-48b0-a2ec-73ce870dbd62jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambdaac07bd3f-9aff-48b0-a2ec-73ce870dbd62genesingle-stranded DNA binding protein ea1033536..339183353633918-122GAGG10ATGTGA1682a518c27-1014-4987-8c6d-c77d9bd51018jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda2a518c27-1014-4987-8c6d-c77d9bd51018generestriction alleviation protein ral34087..342993408734299-66AGGA8ATGTGA-29819736c3-ac94-47f2-abdc-f6193a12b404jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda819736c3-ac94-47f2-abdc-f6193a12b404geneorf2834271..343573427134357-28NoneNoneATGTGA679b8e42f64-15ef-4fb6-b491-5f68bc0bfecdjolenerr@tamu.edu2020-05-272020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda3bd258c3-0580-4bbd-9cbe-4c847adc452egeneCDS.0.1464_0.096544762601434417..345343441734534+33AGG13GTGTAA118598f5752d0-2f43-4b81-94a6-e2bcf0119d63jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda8ce03ed0-ef00-4c52-a0a9-2b2a86bca875genesuperinfection exclusion protein B34487..350363448735036+160GGAG6ATGTAA-483bd258c3-0580-4bbd-9cbe-4c847adc452ejolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambdab8e42f64-15ef-4fb6-b491-5f68bc0bfecdgeneantitermination protein N35037..354513503735451-133GGA10ATGTAG37379c4329a-2551-40cf-85bc-ec2ee1425459jason.gill@tamu.edu2019-02-072020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda79c4329a-2551-40cf-85bc-ec2ee1425459geneexclusion protein rexB35825..362693582536269-144AGGAG5ATGTAA583e81e47-1e39-4cbf-a67d-57e808d97412jason.gill@tamu.edu2019-02-072020-05-27added by JJGNoneNoneNone
NC_001416-1_phage_lambda83e81e47-1e39-4cbf-a67d-57e808d97412geneexclusion protein rexA36275..371243627537124-279GGA7ATGTAA102a7d2cdab-7fda-4061-8472-1764694f0cd2jason.gill@tamu.edu2019-02-072020-05-27added by JJGNoneNoneNone
NC_001416-1_phage_lambdaa7d2cdab-7fda-4061-8472-1764694f0cd2generepressor protein cI37227..379573722737957-237GGT14ATGTGA85016eedd5c5-3c44-404a-af31-acee26522035jason.gill@tamu.edu2019-02-072020-05-27added by JJGNoneNoneNone
NC_001416-1_phage_lambdad731b2bf-e9f9-484f-8851-814510c6a5ecgeneregulatory protein cro38031..382413803138241+66AGGAG5ATGTAA29948ce03ed0-ef00-4c52-a0a9-2b2a86bca875jason.gill@tamu.edu2019-02-072020-05-27added by JJGNoneNoneNone
NC_001416-1_phage_lambda1b331cf3-0897-4489-aa55-b14669ea5998generegulatory protein cII38345..386533834538653+97AGGA11ATGTGA103d731b2bf-e9f9-484f-8851-814510c6a5ecjason.gill@tamu.edu2019-02-072020-05-27added by JJGNoneNoneNone
NC_001416-1_phage_lambda3e912c73-4cba-4590-8d03-357bbef2da31geneDNA replication protein O38676..395853867639585+299AGGAG5ATGTGA221b331cf3-0897-4489-aa55-b14669ea5998jason.gill@tamu.edu2019-02-072020-05-27added by JJGNoneNoneNone
NC_001416-1_phage_lambda07f1dc2a-8b99-4403-b2a1-6f6b1a97a8bfgeneDNA replication protein P39572..402833957240283+233GGGT6ATGTGA-143e912c73-4cba-4590-8d03-357bbef2da31jason.gill@tamu.edu2019-02-072020-05-27added by JJGNoneNoneNone
NC_001416-1_phage_lambdaa15b44d2-c0d8-4c0b-9837-2c3c986b6ff4generen exclusion protein40268..405704026840570+96AGGAG7ATGTGA-1607f1dc2a-8b99-4403-b2a1-6f6b1a97a8bfjolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambdaef111958-2be7-4828-8442-c2c376692e6bgeneNC_001416.1_phage_lambda.gene_4940628..410844062841084+146GGGGG11ATGTGA57a15b44d2-c0d8-4c0b-9837-2c3c986b6ff4jolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambdaccb0da66-e8f2-46c6-b6ce-f3d2fcbdea5egeneNC_001416.1_phage_lambda.orf0008641048..419534104841953+296GGAG11ATGTGA-37ef111958-2be7-4828-8442-c2c376692e6bjolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambdac402b694-7971-451b-aa24-4e70550eef2dgeneNinD41950..421234195042123+57NoneNoneATGTAA-4ccb0da66-e8f2-46c6-b6ce-f3d2fcbdea5ejolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambda61a0d8bd-5b58-4077-bc04-2bcf4dee8939geneCDS.0.2486_0.083200236357742080..422724208042272+60AGGAG5GTGTGA-44c402b694-7971-451b-aa24-4e70550eef2djolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambda49135134-fa86-4df5-a0d7-b629ff152305geneCDS.0.1596_0.041929027711242230..424394223042439+66GGA6GTGTAA-4361a0d8bd-5b58-4077-bc04-2bcf4dee8939jolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambdaa8c3d9d2-cc66-4394-a821-ec0db2e411degeneNC_001416.1_phage_lambda.gene_5142419..430434241943043+204GAGG6ATGTGA-2149135134-fa86-4df5-a0d7-b629ff152305jolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambda0cea2875-2757-4c9b-97f5-7b0ec545394ageneNC_001416.1_phage_lambda.gene_5243032..432464303243246+68GAG5ATGTGA-12a8c3d9d2-cc66-4394-a821-ec0db2e411dejolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambda8ce6427a-594a-4320-955b-be6dd71ab223geneNC_001416.1_phage_lambda.gene_5343135..438894313543889+221GGAG8ATGTGA-1120cea2875-2757-4c9b-97f5-7b0ec545394ajolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambda1653554c-4be1-453b-a377-86e20759321agenelate gene regulator43875..445094387544509+207GGAG7ATGTAG-158ce6427a-594a-4320-955b-be6dd71ab223jolenerr@tamu.edu2020-05-132020-05-27NoneNoneNoneNone
NC_001416-1_phage_lambda6c3ab9c5-a407-47b8-89df-fa997262a409geneCDS.0.1630_0.13275517416544612..448154461244815+64GGT6ATGTAA1021653554c-4be1-453b-a377-86e20759321ajolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambda94064736-88a6-4e82-8c89-8226f57526e8geneantiholin S10745175..455094517545509+213
  • GGGGG, GGGGG
  • 6, 6
  • ATG (45185..45509:1), ATG (45191..45509:1)
TAA3596c3ab9c5-a407-47b8-89df-fa997262a409jolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambdaf8ba23df-ca21-4307-8f5a-ef8243f01accgeneendolysin R45483..459694548345969+158GGAG6ATGTGA-2794064736-88a6-4e82-8c89-8226f57526e8jolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambda4795342c-7959-44d9-925a-781f17371e7agenei-spanin Rz45953..464274595346427+153GAG10ATGTAG-17f8ba23df-ca21-4307-8f5a-ef8243f01accjolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambda18e578e1-38cb-4846-96e8-0190a5a26369geneo-spanin Rz146174..463684617446368+60AGGAG7ATGTGA-2544795342c-7959-44d9-925a-781f17371e7ajolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambda6eedd5c5-3c44-404a-af31-acee26522035genebor46459..467634645946763-97GGA8ATGTAA1322da1b434-7877-4aa2-b88b-24922f70988bjolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambda2da1b434-7877-4aa2-b88b-24922f70988bgeneCDS.0.3497_0.3688841583946896..470294689647029-32GGGG10ATGTAA125d4e2403-4389-497c-a220-9740cd9935ccjolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambda5d4e2403-4389-497c-a220-9740cd9935ccgeneCDS.0.2625_0.76819184084147042..474634704247463-136AGGT7ATGTAA645e0b009e4-729e-4d97-b818-ec0cbebcb1f4jolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambda752f31a0-018a-4223-a7f9-72685604b7a3geneCDS.0.864_0.66798644652547518..476524751847652+40GGT9TTGTAA114918e578e1-38cb-4846-96e8-0190a5a26369jolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambdae3d29177-18a8-4bc0-8d91-15e5760f3bd3geneNC_001416.1_phage_lambda.gene_6047727..479444772747944+68GGAG7ATGTGA74752f31a0-018a-4223-a7f9-72685604b7a3jolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
NC_001416-1_phage_lambdae0b009e4-729e-4d97-b818-ec0cbebcb1f4geneNC_001416.1_phage_lambda.orf0010248109..483144810948314-64GGGG7ATGTGANoneNonejolenerr@tamu.edu2020-05-132020-05-13NoneNoneNoneNone
+
+
+
+
+
+ + + + diff -r 000000000000 -r 6a4d1bd8ac1d cpt_annotation_table/test-data/PhageTable_Out.tabular --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cpt_annotation_table/test-data/PhageTable_Out.tabular Fri Jun 17 12:19:58 2022 +0000 @@ -0,0 +1,79 @@ +# Organism ID ID Type Name Location Boundary Boundary Strand CDS Length (AA) Shine-Dalgarno sequence Shine-Dalgarno spacing Start Codon Stop Codon Distance to next upstream gene on same strand Next gene upstream Owner Created Last Modified User entered Notes Description Product DBxrefs +NC_001416.1_phage_lambda 1185c0aa-14c4-45c3-ab0d-889bbfdbf137 gene terminase small subunit 181..736 181 736 + 181 GGA 7 ATG TAA None None jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 6d452f5a-9508-40c1-9d43-d98831ca8919 gene terminase large subunit 701..2636 701 2636 + 641 GGGT 6 GTG TGA -36 1185c0aa-14c4-45c3-ab0d-889bbfdbf137 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 38175e36-b9e9-48ea-9d1c-7f115fae7194 gene head completion protein 2622..2839 2622 2839 + 68 GGAG 7 ATG TGA -15 6d452f5a-9508-40c1-9d43-d98831ca8919 jolenerr@tamu.edu 2020-05-13 2020-05-28 InterPro domain IPR004174 None None None +NC_001416.1_phage_lambda 0695da41-cce8-4f07-a27a-eb42ac82ae56 gene portal protein B 2824..4437 2824 4437 + 533 AGGA 8 ATG TAA -16 38175e36-b9e9-48ea-9d1c-7f115fae7194 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 422aab41-ac49-4818-b87e-9331023dcacf gene capsid assembly protein 4406..5737 4406 5737 + 673 "GGAG, AGGAGG" "-609, 6" "GTG (4417..5737:1), GTG (5035..5737:1)" TAA -32 0695da41-cce8-4f07-a27a-eb42ac82ae56 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 274304d3-079e-4e08-aa11-219235e1aacb gene capsid decoration protein 5739..6079 5739 6079 + 110 GGA 5 ATG TAA 1 422aab41-ac49-4818-b87e-9331023dcacf jolenerr@tamu.edu 2020-05-13 2020-05-28 None None None None +NC_001416.1_phage_lambda 4f815f9e-5092-4db3-b722-0d912c116293 gene major capsid protein 6099..7160 6099 7160 + 350 AGG 6 GTG TAA 19 274304d3-079e-4e08-aa11-219235e1aacb jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 4da662d1-028a-43e2-9b50-f48ad03bdd64 gene DNA packaging protein FI 7173..7600 7173 7600 + 136 GGGG 13 GTG TAA 12 4f815f9e-5092-4db3-b722-0d912c116293 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 638d1ac5-aea4-4988-b46d-01cf79793dfb gene head-tail connector protein FII 7603..7965 7603 7965 + 117 GGAG 5 GTG TGA 2 4da662d1-028a-43e2-9b50-f48ad03bdd64 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda b541056e-bf91-4113-bce7-86bab4d27f76 gene tail completion protein Z 7968..8555 7968 8555 + 192 GGGG 5 ATG TGA 2 638d1ac5-aea4-4988-b46d-01cf79793dfb jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda fca8745c-c433-4845-9430-c8a9dd4dc37b gene tail tube terminator protein U 8535..8947 8535 8947 + 131 AGGA 13 ATG TGA -21 b541056e-bf91-4113-bce7-86bab4d27f76 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda d9ee7b0e-b4a7-48cf-8c4b-aa95ca8863e0 gene tail tube protein V 8946..9695 8946 9695 + 246 GAGG 5 ATG TAA -2 fca8745c-c433-4845-9430-c8a9dd4dc37b jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 0b5a859a-39f6-4c49-91b7-0b2def466374 gene tape measure chaperone GT 9699..10133 9699 10133 + 275 "GGAG, GGAG" "8, 8" "ATG (9710..10133:1), ATG (9710..10115:1)" TGA 3 d9ee7b0e-b4a7-48cf-8c4b-aa95ca8863e0 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda c6a11d3b-7b9d-446f-ba16-3a642f3f6fbd gene tape measure chaperone GT 10115..10549 10115 10549 + 144 None None GTG TGA -19 0b5a859a-39f6-4c49-91b7-0b2def466374 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 7ef9ffad-d420-4a1c-9a8d-2312dc04b558 gene tape measure protein H 10528..13103 10528 13103 + 853 AGGAGG 8 ATG TGA -22 c6a11d3b-7b9d-446f-ba16-3a642f3f6fbd jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 55fe46da-9e0e-4454-aff9-f9a12c0a2da4 gene tail tip protein M 13089..13429 13089 13429 + 109 GGAGGT 5 ATG TGA -15 7ef9ffad-d420-4a1c-9a8d-2312dc04b558 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 11a10b01-003c-4900-aae9-46139ae23652 gene tail tip protein L 13416..14127 13416 14127 + 232 AGGT 9 ATG TAA -14 55fe46da-9e0e-4454-aff9-f9a12c0a2da4 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda cdb58372-2440-4e07-bcc4-739e0aba461f gene tail tip assembly protein K 14261..14875 14261 14875 + 199 GGAGG 10 ATG TGA 133 11a10b01-003c-4900-aae9-46139ae23652 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 8a865779-0ec1-43bd-a34a-ab74912cf03a gene tail tip assembly protein I 14758..15444 14758 15444 + 223 GAGGT 10 ATG TGA -118 cdb58372-2440-4e07-bcc4-739e0aba461f jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda af1a2402-fb19-4abe-9a0b-b3e9dc613524 gene tip attachment protein J 15493..18903 15493 18903 + 1132 GGAG 8 ATG TGA 48 8a865779-0ec1-43bd-a34a-ab74912cf03a jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 118de905-477c-4bf5-bb2d-1f5b336820bb gene outer membrane protein lom 18955..19585 18955 19585 + 206 GAGGT 5 ATG TGA 51 af1a2402-fb19-4abe-9a0b-b3e9dc613524 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda e7267f7d-4717-4e28-a1a0-564b10661248 gene tail fiber protein stf 19641..20855 19641 20855 + 401 GGGG 5 ATG TGA 55 118de905-477c-4bf5-bb2d-1f5b336820bb jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 9ffb2fcd-96b9-4606-8d3c-c1be0cf0fc5b gene tail fiber protein stf 20852..21973 20852 21973 + 373 None None CTG TAA -4 e7267f7d-4717-4e28-a1a0-564b10661248 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 8f5752d0-2f43-4b81-94a6-e2bcf0119d63 gene tail fiber assembly protein tfa 21961..22557 21961 22557 + 194 GAGG 8 ATG TAA -13 9ffb2fcd-96b9-4606-8d3c-c1be0cf0fc5b jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 89aa3485-6819-4bee-a970-3661cfed1c7a gene protein ea47 22686..23928 22686 23928 - 410 GGAG 6 ATG TGA 166 f04bb9e0-6bb0-48d2-8ac8-8c5eb517d555 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda f04bb9e0-6bb0-48d2-8ac8-8c5eb517d555 gene hypothetical protein 24095..24298 24095 24298 - 63 GGT 9 GTG TAA 210 a638e771-ca1f-4058-93a6-b9bddffd0bf8 jolenerr@tamu.edu 2020-05-13 2020-10-08 None None None None +NC_001416.1_phage_lambda a638e771-ca1f-4058-93a6-b9bddffd0bf8 gene HNH endonuclease ea31 24509..25411 24509 25411 - 296 AGGT 8 ATG TAG -16 27a0e836-ee65-4d75-9d88-2d63b4a28b93 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 27a0e836-ee65-4d75-9d88-2d63b4a28b93 gene nuclease ea59 25396..26983 25396 26983 - 525 GGGT 6 ATG TGA 460 ae844fd4-9b05-485e-a49a-61b6ec9f291a jolenerr@tamu.edu 2020-05-13 2020-05-27 PMID 8052130 None None None +NC_001416.1_phage_lambda ae844fd4-9b05-485e-a49a-61b6ec9f291a gene CDS.0.4499_0.266127908605 27444..27569 27444 27569 - 38 AGGT 5 TTG TAA 242 e5536357-eca7-4860-9cc2-daa21051df98 jolenerr@tamu.edu 2020-05-27 2020-05-27 None None None None +NC_001416.1_phage_lambda e5536357-eca7-4860-9cc2-daa21051df98 gene integrase int 27812..28893 27812 28893 - 356 GAGG 7 ATG TAA -34 016016bc-f3b9-4c48-982e-b463960d3a59 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 016016bc-f3b9-4c48-982e-b463960d3a59 gene excisionase Xis 28860..29090 28860 29090 - 72 GGAG 8 ATG TGA 27 e15c9216-cdbd-4539-879b-9ab30db54d25 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda e15c9216-cdbd-4539-879b-9ab30db54d25 gene hypothetical protein 29118..29296 29118 29296 - 55 GGAG 7 ATG TGA 77 375742bf-c4c9-46e2-b49c-3db72351ae5d jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 375742bf-c4c9-46e2-b49c-3db72351ae5d gene protein ea8.5 29374..29667 29374 29667 - 93 AGGAG 7 ATG TAA 179 c3708fda-012f-40ac-91d0-96ce2b9bc845 jolenerr@tamu.edu 2020-05-13 2020-05-27 Contains CATH G3DSA:1.10.10.1920 with putative hydrolase domain None None None +NC_001416.1_phage_lambda c3708fda-012f-40ac-91d0-96ce2b9bc845 gene protein ea22 29847..30405 29847 30405 - 182 GAGGT 5 GTG TGA -14 4fba3f9c-cbc0-4454-b278-efe088695fef jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 4fba3f9c-cbc0-4454-b278-efe088695fef gene DksA/TraR C4-type zinc finger domain-containing protein 30392..30626 30392 30626 - 73 GGA 10 ATG TGA 85 3302e865-ca96-48ab-a043-66d0b2d464a9 jolenerr@tamu.edu 2020-05-13 2020-05-27 Contains InterPro domain IPR000962 None None None +NC_001416.1_phage_lambda 3302e865-ca96-48ab-a043-66d0b2d464a9 gene hypothetical membrane protein 30712..30894 30712 30894 - 60 None None TTG TGA -56 4a0ceaca-089f-42a3-9185-c5e89f11b935 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 4a0ceaca-089f-42a3-9185-c5e89f11b935 gene hypothetical protein orf61 30839..31024 30839 31024 - 51 GGT 14 ATG TAA -20 97f8a88b-c50d-4710-9ae1-a8dad5ccc83f jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 97f8a88b-c50d-4710-9ae1-a8dad5ccc83f gene hypothetical protein 31005..31206 31005 31206 - 63 GAGG 6 ATG TGA -38 2cc7e0fe-b058-4773-ab3d-e94e32ff3c69 jolenerr@tamu.edu 2020-05-13 2020-05-27 Contains InterPro domain IPR009814 with DUF1382 None None None +NC_001416.1_phage_lambda 2cc7e0fe-b058-4773-ab3d-e94e32ff3c69 gene hypothetical protein 31169..31365 31169 31365 - 62 GGG 5 ATG TAA -18 645d965c-2694-421e-8b95-d800a857c890 jolenerr@tamu.edu 2020-05-13 2020-05-27 Contains InterPro domain IPR009750 DUF1317 None None None +NC_001416.1_phage_lambda 645d965c-2694-421e-8b95-d800a857c890 gene exonuclease exo 31348..32038 31348 32038 - 226 AGGT 6 ATG TGA -14 cd896736-3fb2-4826-b8db-d3966b3b8606 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda cd896736-3fb2-4826-b8db-d3966b3b8606 gene recombination protein bet 32025..32824 32025 32824 - 261 GAGGT 9 ATG TGA -9 411ff345-0c28-4335-a864-560ee4fc66c6 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 411ff345-0c28-4335-a864-560ee4fc66c6 gene host-nuclease inhibitor protein gam 32816..33124 32816 33124 - 98 AGGAG 7 ATG TAA 62 dedaa85a-5d65-4faf-a809-97c9a0ca52a8 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda dedaa85a-5d65-4faf-a809-97c9a0ca52a8 gene host-killing protein kil 33187..33344 33187 33344 - 47 AGGAG 9 ATG TAA -46 00bbe7b0-4092-4355-ba1e-7204fd13953f jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 00bbe7b0-4092-4355-ba1e-7204fd13953f gene protease inhibitor cIII 33299..33474 33299 33474 - 54 AGGAG 6 ATG TAA 61 ac07bd3f-9aff-48b0-a2ec-73ce870dbd62 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda ac07bd3f-9aff-48b0-a2ec-73ce870dbd62 gene single-stranded DNA binding protein ea10 33536..33918 33536 33918 - 122 GAGG 10 ATG TGA 168 2a518c27-1014-4987-8c6d-c77d9bd51018 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 2a518c27-1014-4987-8c6d-c77d9bd51018 gene restriction alleviation protein ral 34087..34299 34087 34299 - 66 AGGA 8 ATG TGA -29 819736c3-ac94-47f2-abdc-f6193a12b404 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 819736c3-ac94-47f2-abdc-f6193a12b404 gene orf28 34271..34357 34271 34357 - 28 None None ATG TGA 679 b8e42f64-15ef-4fb6-b491-5f68bc0bfecd jolenerr@tamu.edu 2020-05-27 2020-05-27 None None None None +NC_001416.1_phage_lambda 3bd258c3-0580-4bbd-9cbe-4c847adc452e gene CDS.0.1464_0.0965447626014 34417..34534 34417 34534 + 33 AGG 13 GTG TAA 11859 8f5752d0-2f43-4b81-94a6-e2bcf0119d63 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 8ce03ed0-ef00-4c52-a0a9-2b2a86bca875 gene superinfection exclusion protein B 34487..35036 34487 35036 + 160 GGAG 6 ATG TAA -48 3bd258c3-0580-4bbd-9cbe-4c847adc452e jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda b8e42f64-15ef-4fb6-b491-5f68bc0bfecd gene antitermination protein N 35037..35451 35037 35451 - 133 GGA 10 ATG TAG 373 79c4329a-2551-40cf-85bc-ec2ee1425459 jason.gill@tamu.edu 2019-02-07 2020-05-27 None None None None +NC_001416.1_phage_lambda 79c4329a-2551-40cf-85bc-ec2ee1425459 gene exclusion protein rexB 35825..36269 35825 36269 - 144 AGGAG 5 ATG TAA 5 83e81e47-1e39-4cbf-a67d-57e808d97412 jason.gill@tamu.edu 2019-02-07 2020-05-27 added by JJG None None None +NC_001416.1_phage_lambda 83e81e47-1e39-4cbf-a67d-57e808d97412 gene exclusion protein rexA 36275..37124 36275 37124 - 279 GGA 7 ATG TAA 102 a7d2cdab-7fda-4061-8472-1764694f0cd2 jason.gill@tamu.edu 2019-02-07 2020-05-27 added by JJG None None None +NC_001416.1_phage_lambda a7d2cdab-7fda-4061-8472-1764694f0cd2 gene repressor protein cI 37227..37957 37227 37957 - 237 GGT 14 ATG TGA 8501 6eedd5c5-3c44-404a-af31-acee26522035 jason.gill@tamu.edu 2019-02-07 2020-05-27 added by JJG None None None +NC_001416.1_phage_lambda d731b2bf-e9f9-484f-8851-814510c6a5ec gene regulatory protein cro 38031..38241 38031 38241 + 66 AGGAG 5 ATG TAA 2994 8ce03ed0-ef00-4c52-a0a9-2b2a86bca875 jason.gill@tamu.edu 2019-02-07 2020-05-27 added by JJG None None None +NC_001416.1_phage_lambda 1b331cf3-0897-4489-aa55-b14669ea5998 gene regulatory protein cII 38345..38653 38345 38653 + 97 AGGA 11 ATG TGA 103 d731b2bf-e9f9-484f-8851-814510c6a5ec jason.gill@tamu.edu 2019-02-07 2020-05-27 added by JJG None None None +NC_001416.1_phage_lambda 3e912c73-4cba-4590-8d03-357bbef2da31 gene DNA replication protein O 38676..39585 38676 39585 + 299 AGGAG 5 ATG TGA 22 1b331cf3-0897-4489-aa55-b14669ea5998 jason.gill@tamu.edu 2019-02-07 2020-05-27 added by JJG None None None +NC_001416.1_phage_lambda 07f1dc2a-8b99-4403-b2a1-6f6b1a97a8bf gene DNA replication protein P 39572..40283 39572 40283 + 233 GGGT 6 ATG TGA -14 3e912c73-4cba-4590-8d03-357bbef2da31 jason.gill@tamu.edu 2019-02-07 2020-05-27 added by JJG None None None +NC_001416.1_phage_lambda a15b44d2-c0d8-4c0b-9837-2c3c986b6ff4 gene ren exclusion protein 40268..40570 40268 40570 + 96 AGGAG 7 ATG TGA -16 07f1dc2a-8b99-4403-b2a1-6f6b1a97a8bf jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda ef111958-2be7-4828-8442-c2c376692e6b gene NC_001416.1_phage_lambda.gene_49 40628..41084 40628 41084 + 146 GGGGG 11 ATG TGA 57 a15b44d2-c0d8-4c0b-9837-2c3c986b6ff4 jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda ccb0da66-e8f2-46c6-b6ce-f3d2fcbdea5e gene NC_001416.1_phage_lambda.orf00086 41048..41953 41048 41953 + 296 GGAG 11 ATG TGA -37 ef111958-2be7-4828-8442-c2c376692e6b jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda c402b694-7971-451b-aa24-4e70550eef2d gene NinD 41950..42123 41950 42123 + 57 None None ATG TAA -4 ccb0da66-e8f2-46c6-b6ce-f3d2fcbdea5e jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda 61a0d8bd-5b58-4077-bc04-2bcf4dee8939 gene CDS.0.2486_0.0832002363577 42080..42272 42080 42272 + 60 AGGAG 5 GTG TGA -44 c402b694-7971-451b-aa24-4e70550eef2d jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda 49135134-fa86-4df5-a0d7-b629ff152305 gene CDS.0.1596_0.0419290277112 42230..42439 42230 42439 + 66 GGA 6 GTG TAA -43 61a0d8bd-5b58-4077-bc04-2bcf4dee8939 jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda a8c3d9d2-cc66-4394-a821-ec0db2e411de gene NC_001416.1_phage_lambda.gene_51 42419..43043 42419 43043 + 204 GAGG 6 ATG TGA -21 49135134-fa86-4df5-a0d7-b629ff152305 jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda 0cea2875-2757-4c9b-97f5-7b0ec545394a gene NC_001416.1_phage_lambda.gene_52 43032..43246 43032 43246 + 68 GAG 5 ATG TGA -12 a8c3d9d2-cc66-4394-a821-ec0db2e411de jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda 8ce6427a-594a-4320-955b-be6dd71ab223 gene NC_001416.1_phage_lambda.gene_53 43135..43889 43135 43889 + 221 GGAG 8 ATG TGA -112 0cea2875-2757-4c9b-97f5-7b0ec545394a jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda 1653554c-4be1-453b-a377-86e20759321a gene late gene regulator 43875..44509 43875 44509 + 207 GGAG 7 ATG TAG -15 8ce6427a-594a-4320-955b-be6dd71ab223 jolenerr@tamu.edu 2020-05-13 2020-05-27 None None None None +NC_001416.1_phage_lambda 6c3ab9c5-a407-47b8-89df-fa997262a409 gene CDS.0.1630_0.132755174165 44612..44815 44612 44815 + 64 GGT 6 ATG TAA 102 1653554c-4be1-453b-a377-86e20759321a jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda 94064736-88a6-4e82-8c89-8226f57526e8 gene antiholin S107 45175..45509 45175 45509 + 213 "GGGGG, GGGGG" "6, 6" "ATG (45185..45509:1), ATG (45191..45509:1)" TAA 359 6c3ab9c5-a407-47b8-89df-fa997262a409 jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda f8ba23df-ca21-4307-8f5a-ef8243f01acc gene endolysin R 45483..45969 45483 45969 + 158 GGAG 6 ATG TGA -27 94064736-88a6-4e82-8c89-8226f57526e8 jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda 4795342c-7959-44d9-925a-781f17371e7a gene i-spanin Rz 45953..46427 45953 46427 + 153 GAG 10 ATG TAG -17 f8ba23df-ca21-4307-8f5a-ef8243f01acc jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda 18e578e1-38cb-4846-96e8-0190a5a26369 gene o-spanin Rz1 46174..46368 46174 46368 + 60 AGGAG 7 ATG TGA -254 4795342c-7959-44d9-925a-781f17371e7a jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda 6eedd5c5-3c44-404a-af31-acee26522035 gene bor 46459..46763 46459 46763 - 97 GGA 8 ATG TAA 132 2da1b434-7877-4aa2-b88b-24922f70988b jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda 2da1b434-7877-4aa2-b88b-24922f70988b gene CDS.0.3497_0.36888415839 46896..47029 46896 47029 - 32 GGGG 10 ATG TAA 12 5d4e2403-4389-497c-a220-9740cd9935cc jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda 5d4e2403-4389-497c-a220-9740cd9935cc gene CDS.0.2625_0.768191840841 47042..47463 47042 47463 - 136 AGGT 7 ATG TAA 645 e0b009e4-729e-4d97-b818-ec0cbebcb1f4 jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda 752f31a0-018a-4223-a7f9-72685604b7a3 gene CDS.0.864_0.667986446525 47518..47652 47518 47652 + 40 GGT 9 TTG TAA 1149 18e578e1-38cb-4846-96e8-0190a5a26369 jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda e3d29177-18a8-4bc0-8d91-15e5760f3bd3 gene NC_001416.1_phage_lambda.gene_60 47727..47944 47727 47944 + 68 GGAG 7 ATG TGA 74 752f31a0-018a-4223-a7f9-72685604b7a3 jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None +NC_001416.1_phage_lambda e0b009e4-729e-4d97-b818-ec0cbebcb1f4 gene NC_001416.1_phage_lambda.orf00102 48109..48314 48109 48314 - 64 GGGG 7 ATG TGA None None jolenerr@tamu.edu 2020-05-13 2020-05-13 None None None None