Mercurial > repos > cpt > cpt_blastp_to_gff
annotate test-data/BlastpXmlToGff_In.blastxml @ 4:a31978730417 draft default tip
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author | cpt |
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date | Fri, 05 Jan 2024 05:49:29 +0000 |
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1 <?xml version="1.0"?> |
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2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> |
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3 <BlastOutput> |
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4 <BlastOutput_program>blastp</BlastOutput_program> |
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5 <BlastOutput_version>BLASTP 2.9.0+</BlastOutput_version> |
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6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference> |
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7 <BlastOutput_db>/opt/blast/phage/2019-06/canonical</BlastOutput_db> |
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8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID> |
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9 <BlastOutput_query-def>20c66702-cb8b-4c94-a682-edd0ead876b6-CDS [Location=[244:1063](+);Name=20c66702-cb8b-4c94-a682-edd0ead876b6-CDS]</BlastOutput_query-def> |
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10 <BlastOutput_query-len>272</BlastOutput_query-len> |
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11 <BlastOutput_param> |
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12 <Parameters> |
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13 <Parameters_matrix>BLOSUM62</Parameters_matrix> |
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14 <Parameters_expect>0.001</Parameters_expect> |
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15 <Parameters_gap-open>11</Parameters_gap-open> |
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16 <Parameters_gap-extend>1</Parameters_gap-extend> |
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17 <Parameters_filter>F</Parameters_filter> |
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18 </Parameters> |
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19 </BlastOutput_param> |
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20 <BlastOutput_iterations> |
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21 <Iteration> |
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22 <Iteration_iter-num>1</Iteration_iter-num> |
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23 <Iteration_query-ID>Query_1</Iteration_query-ID> |
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24 <Iteration_query-def>20c66702-cb8b-4c94-a682-edd0ead876b6-CDS [Location=[244:1063](+);Name=20c66702-cb8b-4c94-a682-edd0ead876b6-CDS]</Iteration_query-def> |
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25 <Iteration_query-len>272</Iteration_query-len> |
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26 <Iteration_hits> |
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27 <Hit> |
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28 <Hit_num>1</Hit_num> |
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29 <Hit_id>gnl|BL_ORD_ID|594</Hit_id> |
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30 <Hit_def>org_id=NC_005880.2_protein_id=YP_009041357.1 locus_tag=CPT_phageK_gp131 protein=putative ribonucleotide reductase large subunit</Hit_def> |
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31 <Hit_accession>594</Hit_accession> |
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32 <Hit_len>704</Hit_len> |
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33 <Hit_hsps> |
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34 <Hsp> |
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35 <Hsp_num>1</Hsp_num> |
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36 <Hsp_bit-score>464.922</Hsp_bit-score> |
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37 <Hsp_score>1195</Hsp_score> |
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38 <Hsp_evalue>9.80457e-163</Hsp_evalue> |
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39 <Hsp_query-from>1</Hsp_query-from> |
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40 <Hsp_query-to>272</Hsp_query-to> |
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41 <Hsp_hit-from>433</Hsp_hit-from> |
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42 <Hsp_hit-to>704</Hsp_hit-to> |
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43 <Hsp_query-frame>0</Hsp_query-frame> |
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44 <Hsp_hit-frame>0</Hsp_hit-frame> |
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45 <Hsp_identity>219</Hsp_identity> |
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46 <Hsp_positive>248</Hsp_positive> |
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47 <Hsp_gaps>0</Hsp_gaps> |
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48 <Hsp_align-len>272</Hsp_align-len> |
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49 <Hsp_qseq>MGMRSLSNVTDMMYLPFLPSVNKANDELHAVGLGSLNLHGLLAKNMISYGSLEALDLINSLYSAINYNSIKSSMHIAKEKGKSFKGFEKSEYANGNYFKPYINKSNEPTTQKAKEVLEKVYIPSQDDWEQLAKDVKRYGLYNAYRRAEAPTQSISYVQNATASIMPVPSAIENRQYGDMETYYPMPFLSPITQFFYDNETAYKLDNKKIINTGAVVQKHTDQAVSTILYVESEIPTNKLVSLYYYAWSKGLKSLYYTRSRKLEVIECETCSV</Hsp_qseq> |
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50 <Hsp_hseq>IGTRALTKVTDIMDLPYLPSVQKANDDIRAIGLGSMNLHGLLAKNMISYGSREALDLVNSLYSAINFQSIKTSMLMAKETGKPFKGFEKSDYATGEYFVRYIRESNQPKTDKAKKVLDKVYIPTQDDWDELAKAVKVHGLYNGYRKAEAPTQSISYVQNATSSIMPVPSAIENRQYGDMETYYPMPYLSPITQFFYEGETAYKIDNKRIINTSAVVQKHTDQAVSTILYVESEIPTNKLVSLYYYAWEQGLKSLYYTRSRKLSVIECETCSV</Hsp_hseq> |
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51 <Hsp_midline>+G R+L+ VTD+M LP+LPSV KAND++ A+GLGS+NLHGLLAKNMISYGS EALDL+NSLYSAIN+ SIK+SM +AKE GK FKGFEKS+YA G YF YI +SN+P T KAK+VL+KVYIP+QDDW++LAK VK +GLYN YR+AEAPTQSISYVQNAT+SIMPVPSAIENRQYGDMETYYPMP+LSPITQFFY+ ETAYK+DNK+IINT AVVQKHTDQAVSTILYVESEIPTNKLVSLYYYAW +GLKSLYYTRSRKL VIECETCSV</Hsp_midline> |
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52 </Hsp> |
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53 </Hit_hsps> |
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54 </Hit> |
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55 <Hit> |
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56 <Hit_num>2</Hit_num> |
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57 <Hit_id>gnl|BL_ORD_ID|965</Hit_id> |
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58 <Hit_def>org_id=NC_011421.1_protein_id=YP_002300341.1 gene=2.9 locus_tag=SPO1_69 protein=gp2.9</Hit_def> |
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59 <Hit_accession>965</Hit_accession> |
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60 <Hit_len>756</Hit_len> |
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61 <Hit_hsps> |
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62 <Hsp> |
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63 <Hsp_num>1</Hsp_num> |
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64 <Hsp_bit-score>118.627</Hsp_bit-score> |
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65 <Hsp_score>296</Hsp_score> |
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66 <Hsp_evalue>2.34569e-31</Hsp_evalue> |
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67 <Hsp_query-from>3</Hsp_query-from> |
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68 <Hsp_query-to>271</Hsp_query-to> |
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69 <Hsp_hit-from>504</Hsp_hit-from> |
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70 <Hsp_hit-to>756</Hsp_hit-to> |
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71 <Hsp_query-frame>0</Hsp_query-frame> |
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72 <Hsp_hit-frame>0</Hsp_hit-frame> |
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73 <Hsp_identity>78</Hsp_identity> |
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74 <Hsp_positive>135</Hsp_positive> |
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75 <Hsp_gaps>20</Hsp_gaps> |
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76 <Hsp_align-len>271</Hsp_align-len> |
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77 <Hsp_qseq>MRSLSNVTDMMYLPFLPSVNKANDELHAVGLGSLNLHGLLAKNMISYGSLEALDLINSLYSAINYNSIKSSMHIAKEKGKSFKGFEKSEYANGNYFKPYINKSNEPTTQKAKEVLEKVYIPSQDDWEQLAKDVKRYGLYNAYRRAEAPTQSISYVQNATASIMP--VPSAIENRQYGDMETYYPMPFLSPITQFFYDNETAYKLDNKKIINTGAVVQKHTDQAVSTILYVESEIPTNKLVSLYYYAWSKGLKSLYYTRSRKLEVIECETCS</Hsp_qseq> |
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78 <Hsp_hseq>VRMLDNVIDVNNLP-RKQATLTNKKYRAIGLGTFGWHHLLAVSGIKWDSEESVEFADKVYEKIAYLALRASADIAKEKG-TYRAFEGSDFHTGDYFNIRGYKSE----------------GSEHDWDTLKEDCMNTGIRNAHVLAVAPNGNTALIAGSTQGIDAFYTGTGIYYEEKKDFKIPVIAPDMSPKTFPYYWKSGAFDVSHEYTIRQNAMRQKHIDQSVSFNIYIKSDIKFKDILNIINTCWKNKLKTTYYFRGQSNDIEDCVSCT</Hsp_hseq> |
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79 <Hsp_midline>+R L NV D+ LP N + A+GLG+ H LLA + I + S E+++ + +Y I Y ++++S IAKEKG +++ FE S++ G+YF KS S+ DW+ L +D G+ NA+ A AP + + + +T I + I + D + P +SP T +Y A+ + ++ I A+ QKH DQ+VS +Y++S+I ++++ W LK+ YY R + ++ +C +C+</Hsp_midline> |
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80 </Hsp> |
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81 </Hit_hsps> |
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82 </Hit> |
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83 <Hit> |
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84 <Hit_num>3</Hit_num> |
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85 <Hit_id>gnl|BL_ORD_ID|1865</Hit_id> |
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86 <Hit_def>org_id=NC_005282.1_protein_id=NP_944991.1 gene=nrdA locus_tag=Felix01p212 protein=Ribonucleoside triphosphate reductase, alpha chain</Hit_def> |
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87 <Hit_accession>1865</Hit_accession> |
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88 <Hit_len>744</Hit_len> |
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89 <Hit_hsps> |
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90 <Hsp> |
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91 <Hsp_num>1</Hsp_num> |
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92 <Hsp_bit-score>82.8037</Hsp_bit-score> |
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93 <Hsp_score>203</Hsp_score> |
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94 <Hsp_evalue>4.33027e-19</Hsp_evalue> |
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95 <Hsp_query-from>6</Hsp_query-from> |
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96 <Hsp_query-to>272</Hsp_query-to> |
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97 <Hsp_hit-from>482</Hsp_hit-from> |
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98 <Hsp_hit-to>744</Hsp_hit-to> |
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99 <Hsp_query-frame>0</Hsp_query-frame> |
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100 <Hsp_hit-frame>0</Hsp_hit-frame> |
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101 <Hsp_identity>77</Hsp_identity> |
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102 <Hsp_positive>128</Hsp_positive> |
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103 <Hsp_gaps>26</Hsp_gaps> |
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104 <Hsp_align-len>278</Hsp_align-len> |
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105 <Hsp_qseq>LSNVTDMMYLPFLPSVNKANDELHAVGLGSLNLHGLLAKNMISYGSLEALDLINSLYSAINYNSIKSSMHIAKEKGKSFKGFEKSEYANGNYFKPYINKSNEPTTQKAKEVLEKVYIPSQDDWEQLAKDVKR-YGLYNAYRRAEAPTQSISYVQNATASIMPVPSAIENRQYGDMETYYPMPFLSPITQFFYDNETAYKLDNKKIINTGAVVQKHTDQAVSTILYVE----SEIPTNKLVSLYYYAWSKGLKSLYYTRSR------KLEVIECETCSV</Hsp_qseq> |
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106 <Hsp_hseq>VDSVIDLMDYPY-PSMRNHVQKRRSVGIGLTNVAHYLAKNYVNYSSRAGKTKLHELAEMHSYYLHEASLRLAKERG-------VPEYMK---FTKYPEGWVPPKTAN-KKIDEKHDAKLRYDWDDLAQRIKENGGIRNSVLEAYMPNESSSLATNTTNGLYPIRDFILTKKSATGNVLFIVP---DYEELKYVYEIAWDIDTFDMIDCYAIVQKFTGQAISSDFYVDYAKSKKVSLAQALKYMIYANSVGMKTMYYLNSRIGVGKSALQDAYCEGCGV</Hsp_hseq> |
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107 <Hsp_midline>+ +V D+M P+ PS+ + +VG+G N+ LAKN ++Y S ++ L +Y ++S+ +AKE+G EY F Y P T K++ EK + DW+ LA+ +K G+ N+ A P +S S N T + P+ I ++ + +P + Y E A+ +D +I+ A+VQK T QA+S+ YV+ ++ + + YA S G+K++YY SR L+ CE C V</Hsp_midline> |
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108 </Hsp> |
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109 </Hit_hsps> |
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110 </Hit> |
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111 <Hit> |
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112 <Hit_num>4</Hit_num> |
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113 <Hit_id>gnl|BL_ORD_ID|2290</Hit_id> |
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114 <Hit_def>org_id=NC_000866.4_protein_id=NP_049845.1 gene=nrdA locus_tag=T4p234 protein=ribonucleoside-diphosphate reductase subunit alpha</Hit_def> |
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115 <Hit_accession>2290</Hit_accession> |
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116 <Hit_len>754</Hit_len> |
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117 <Hit_hsps> |
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118 <Hsp> |
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119 <Hsp_num>1</Hsp_num> |
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120 <Hsp_bit-score>73.559</Hsp_bit-score> |
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121 <Hsp_score>179</Hsp_score> |
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122 <Hsp_evalue>6.52846e-16</Hsp_evalue> |
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123 <Hsp_query-from>3</Hsp_query-from> |
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124 <Hsp_query-to>260</Hsp_query-to> |
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125 <Hsp_hit-from>483</Hsp_hit-from> |
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126 <Hsp_hit-to>731</Hsp_hit-to> |
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127 <Hsp_query-frame>0</Hsp_query-frame> |
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128 <Hsp_hit-frame>0</Hsp_hit-frame> |
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129 <Hsp_identity>73</Hsp_identity> |
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130 <Hsp_positive>121</Hsp_positive> |
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131 <Hsp_gaps>25</Hsp_gaps> |
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132 <Hsp_align-len>266</Hsp_align-len> |
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133 <Hsp_qseq>MRSLSNVTDMMYLPFLPSVNKANDELHAVGLGSLNLHGLLAKNMISYGSLEALDLINSLYSAINYNSIKSSMHIAKEKGKSFKGFEKSEYANGNYFKPYINKSNEPTTQKAKEVLEKVYIPSQDDWEQLAKDVKRYGLYNAYRRAEAPTQSISYVQNATASIMPV--PSAIENRQYGDMETYYPMPFLSPITQFFYDNETAYKLDNKKIINTGAVVQKHTDQAVSTILYVESEI------PTNKLVSLYYYAWSKGLKSLYYTRSR</Hsp_qseq> |
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134 <Hsp_hseq>VRALDNLLDYQGYP-VPEAEKAKKRRN-LGVGVTNYAAWLASNFASYE--DANDLTHELFERLQYGLIKASIKLAKEKGPS-EYYSDTRWSRGELPIDWYNK-------KIDQIAAPKYVC---DWSALREDLKLFGIRNSTLSALMPCESSSQVSNSTNGYEPPRGPVSVKESKEGSFNQVVPN-IEHNIDLYDYTWKLAKK-GNKPYLTQVAIMLKWVCQSASANTYYDPQIFPKGKVPMSIMIDDMLYGWYYGIKNFYYHNTR</Hsp_hseq> |
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135 <Hsp_midline>+R+L N+ D P +P KA + +G+G N LA N SY +A DL + L+ + Y IK+S+ +AKEKG S + + + ++ G + NK K ++ Y+ DW L +D+K +G+ N+ A P +S S V N+T P P +++ + G P I + Y + A K NK + A++ K Q+ S Y + +I P + ++ Y W G+K+ YY +R</Hsp_midline> |
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136 </Hsp> |
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137 </Hit_hsps> |
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138 </Hit> |
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139 <Hit> |
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140 <Hit_num>5</Hit_num> |
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141 <Hit_id>gnl|BL_ORD_ID|776</Hit_id> |
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142 <Hit_def>org_id=NC_015296.1_protein_id=YP_004327455.1 gene=nrdA locus_tag=Vi01_084c protein=Ribonucleoside-diphosphate reductase 1 subunit alpha</Hit_def> |
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143 <Hit_accession>776</Hit_accession> |
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144 <Hit_len>758</Hit_len> |
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145 <Hit_hsps> |
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146 <Hsp> |
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147 <Hsp_num>1</Hsp_num> |
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148 <Hsp_bit-score>65.4698</Hsp_bit-score> |
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149 <Hsp_score>158</Hsp_score> |
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150 <Hsp_evalue>3.17864e-13</Hsp_evalue> |
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151 <Hsp_query-from>24</Hsp_query-from> |
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152 <Hsp_query-to>272</Hsp_query-to> |
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153 <Hsp_hit-from>506</Hsp_hit-from> |
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154 <Hsp_hit-to>758</Hsp_hit-to> |
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155 <Hsp_query-frame>0</Hsp_query-frame> |
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156 <Hsp_hit-frame>0</Hsp_hit-frame> |
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157 <Hsp_identity>69</Hsp_identity> |
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158 <Hsp_positive>121</Hsp_positive> |
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159 <Hsp_gaps>46</Hsp_gaps> |
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160 <Hsp_align-len>274</Hsp_align-len> |
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161 <Hsp_qseq>ANDELHAVGLGSLNLHGLLAKNMISYGSLEALDLINSLYSAINYNSIKSSMHIAKEKGKSFKGFEKSEYANGNYFKPYINKSNEPTTQKAKEVLEKVYIPSQD---------DWEQLAKDVKRYGLYNAYRRAEAPTQSISYVQNATASIMPVPSAIENRQYGDMETYYPMPFLSPITQFFYDNETAYKLDNKKIINTGAVVQKHTDQAVSTILYVESE------IPTNKLVS--LYYYAWSKGLKSLYYTRSR------KLEVIE--CETCSV</Hsp_qseq> |
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162 <Hsp_hseq>AVEEYRPLGIGVVNVAHFFAKNFTGYGSPVGLELLDKWMAHLHFYLVKASNRLAMKFGAC--------------KKETIHRSGKITADLQPLPLD--ILPNGKKPEGMAYGLDWDGLKDSLRCHGIRNATLLAIAPTESSSQVLNATNGIEPPKGLISIKGSKDGVYKQIVPDVETLGPLY---DLKWNLSCIDYLKTAAVAQRWVDQSISVNTHYDPEKFPDGKIPRSLMMQDILSFYMW--GGKTLYYNTNKDSKEDEELKQVEEICDTCVV</Hsp_hseq> |
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163 <Hsp_midline>A +E +G+G +N+ AKN YGS L+L++ + +++ +K+S +A + G K I++S + T L+ +P+ DW+ L ++ +G+ NA A APT+S S V NAT I P I + D +P + + + + + L + T AV Q+ DQ++S + + E IP + ++ L +Y W G K+LYY ++ +L+ +E C+TC V</Hsp_midline> |
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164 </Hsp> |
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165 </Hit_hsps> |
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166 </Hit> |
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167 <Hit> |
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168 <Hit_num>6</Hit_num> |
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169 <Hit_id>gnl|BL_ORD_ID|1499</Hit_id> |
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170 <Hit_def>org_id=NC_005859.1_protein_id=YP_006924.1 gene=nrdA locus_tag=T5.096 protein=putative aerobic ribonucleoside diphosphate reductase, large subunit</Hit_def> |
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171 <Hit_accession>1499</Hit_accession> |
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172 <Hit_len>811</Hit_len> |
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173 <Hit_hsps> |
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174 <Hsp> |
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175 <Hsp_num>1</Hsp_num> |
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176 <Hsp_bit-score>65.4698</Hsp_bit-score> |
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177 <Hsp_score>158</Hsp_score> |
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178 <Hsp_evalue>3.18155e-13</Hsp_evalue> |
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179 <Hsp_query-from>3</Hsp_query-from> |
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180 <Hsp_query-to>256</Hsp_query-to> |
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181 <Hsp_hit-from>540</Hsp_hit-from> |
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182 <Hsp_hit-to>786</Hsp_hit-to> |
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183 <Hsp_query-frame>0</Hsp_query-frame> |
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184 <Hsp_hit-frame>0</Hsp_hit-frame> |
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185 <Hsp_identity>65</Hsp_identity> |
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186 <Hsp_positive>121</Hsp_positive> |
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187 <Hsp_gaps>19</Hsp_gaps> |
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188 <Hsp_align-len>260</Hsp_align-len> |
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189 <Hsp_qseq>MRSLSNVTDMMYLPFLPSVNKANDELHAVGLGSLNLHGLLAKNMISYGSLEALDLINSLYSAINYNSIKSSMHIAKEKGKSFKGFEKSEYANGNYFKPYINKSNEPTTQKAKEVLEKVYIPSQDDWEQLAKDVKRYGLYNAYRRAEAPTQSISYVQNATASIMPVPSAIENRQYGDMETYYPMPFLSPITQFFYDNETAYKLDNKKIINTGAVVQKHTDQAVSTILY-----VESE-IPTNKLVSLYYYAWSKGLKSLYY</Hsp_qseq> |
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190 <Hsp_hseq>LKFVDTIIEIQDYPF-PTMEYTAKKRRNVGIGLMNAAGAMAAEGLAYEGIEARNWIHREAEKLSYFLHKASVRLAKEQG-ACEWFNRTKPSKGILVIDTYKKT----------VDELVSVGLEMDWESLRADILKYGMRNSVLTAQMPGESSSVLLGVTNSIEP-PRKIVSIKGSAVNKVIAIAPGATDWETLMSYKLAYDVDRIEWIKWVATMQKFFSQSISTNMYYDYTKFENEIIPGPVVVRDFMTAVKYGWKTWYY</Hsp_hseq> |
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191 <Hsp_midline>++ + + ++ PF P++ + VG+G +N G +A ++Y +EA + I+ ++Y K+S+ +AKE+G + + F +++ + G K+ V E V + + DWE L D+ +YG+ N+ A+ P +S S + T SI P P I + + + + + + + AY +D + I A +QK Q++ST +Y E+E IP +V + A G K+ YY</Hsp_midline> |
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192 </Hsp> |
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193 </Hit_hsps> |
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194 </Hit> |
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195 <Hit> |
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196 <Hit_num>7</Hit_num> |
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197 <Hit_id>gnl|BL_ORD_ID|125</Hit_id> |
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198 <Hit_def>org_id=NC_023693.1_protein_id=YP_009012406.1 gene=PHI92_gene_075 locus_tag=PHI92_gp097 protein=Phi92_gp075</Hit_def> |
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199 <Hit_accession>125</Hit_accession> |
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200 <Hit_len>754</Hit_len> |
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201 <Hit_hsps> |
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202 <Hsp> |
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203 <Hsp_num>1</Hsp_num> |
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204 <Hsp_bit-score>63.929</Hsp_bit-score> |
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205 <Hsp_score>154</Hsp_score> |
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206 <Hsp_evalue>8.59519e-13</Hsp_evalue> |
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207 <Hsp_query-from>5</Hsp_query-from> |
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208 <Hsp_query-to>260</Hsp_query-to> |
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209 <Hsp_hit-from>485</Hsp_hit-from> |
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210 <Hsp_hit-to>732</Hsp_hit-to> |
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211 <Hsp_query-frame>0</Hsp_query-frame> |
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212 <Hsp_hit-frame>0</Hsp_hit-frame> |
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213 <Hsp_identity>68</Hsp_identity> |
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214 <Hsp_positive>115</Hsp_positive> |
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215 <Hsp_gaps>22</Hsp_gaps> |
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216 <Hsp_align-len>263</Hsp_align-len> |
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217 <Hsp_qseq>SLSNVTDMMYLPFLPSVNKANDELHAVGLGSLNLHGLLAKNMISYGSLEALDLINSLYSAINYNSIKSSMHIAKEKGKSFKGFEKSEYANGNYFKPYINKSNEPTTQKAKEVLEKVYIPSQDDWEQLAKD-VKRYGLYNAYRRAEAPTQSISYVQNATASIMPVPSAIENRQYGDMETYYPMPFLSPITQFFYDNETAYKLDNKKIINTGAVVQKHTDQAVSTILYVESEIPTNKLVSL-----YYYAWSK-GLKSLYYTRSR</Hsp_qseq> |
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218 <Hsp_hseq>TIDNVIETMQYPFKHNEITAKAR-RSIGVGITNLAHYLASNFVTYSDPYGKKLIHELAERHYYWLARASLRLAKEKGNA-EWMHKTKWPEGWL----------PIDTYAKAVDDIGNFKLKMDWEGLRQDIIAQGGIRNSVLAAIAPNESSSLVSNTTNSVYPVRDTIVYKQSQKGNVLFIVPDYDKLKDIY---QSAWDTPDKDMAEAYGLLTKFLDQGASCDKWIDYSKMEGGRLSIKSEMQYILQFAKLGGKSLYYLNSR</Hsp_hseq> |
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219 <Hsp_midline>++ NV + M PF + A ++G+G NL LA N ++Y LI+ L Y ++S+ +AKEKG + + K+++ G P AK V + + DWE L +D + + G+ N+ A AP +S S V N T S+ PV I +Q + +P + + ++A+ +K + ++ K DQ S +++ +S+ Y ++K G KSLYY SR</Hsp_midline> |
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220 </Hsp> |
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221 </Hit_hsps> |
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222 </Hit> |
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223 </Iteration_hits> |
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224 <Iteration_stat> |
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225 <Statistics> |
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226 <Statistics_db-num>3263</Statistics_db-num> |
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227 <Statistics_db-len>679396</Statistics_db-len> |
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228 <Statistics_hsp-len>77</Statistics_hsp-len> |
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229 <Statistics_eff-space>83488275</Statistics_eff-space> |
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230 <Statistics_kappa>0.041</Statistics_kappa> |
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231 <Statistics_lambda>0.267</Statistics_lambda> |
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232 <Statistics_entropy>0.14</Statistics_entropy> |
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233 </Statistics> |
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234 </Iteration_stat> |
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235 </Iteration> |
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236 <Iteration> |
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237 <Iteration_iter-num>2</Iteration_iter-num> |
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238 <Iteration_query-ID>Query_2</Iteration_query-ID> |
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239 <Iteration_query-def>fca58619-d67f-4d18-a616-e717a82896e8 [Location=[1077:3309](+);Name=fca58619-d67f-4d18-a616-e717a82896e8]</Iteration_query-def> |
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240 <Iteration_query-len>743</Iteration_query-len> |
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241 <Iteration_hits> |
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242 <Hit> |
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243 <Hit_num>1</Hit_num> |
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244 <Hit_id>gnl|BL_ORD_ID|600</Hit_id> |
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245 <Hit_def>org_id=NC_005880.2_protein_id=YP_009041363.1 locus_tag=CPT_phageK_gp125 protein=putative DNA polymerase A</Hit_def> |
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246 <Hit_accession>600</Hit_accession> |
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247 <Hit_len>1072</Hit_len> |
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248 <Hit_hsps> |
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249 <Hsp> |
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250 <Hsp_num>1</Hsp_num> |
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251 <Hsp_bit-score>982.245</Hsp_bit-score> |
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252 <Hsp_score>2538</Hsp_score> |
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253 <Hsp_evalue>0</Hsp_evalue> |
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254 <Hsp_query-from>1</Hsp_query-from> |
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255 <Hsp_query-to>743</Hsp_query-to> |
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256 <Hsp_hit-from>1</Hsp_hit-from> |
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257 <Hsp_hit-to>743</Hsp_hit-to> |
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258 <Hsp_query-frame>0</Hsp_query-frame> |
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259 <Hsp_hit-frame>0</Hsp_hit-frame> |
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260 <Hsp_identity>472</Hsp_identity> |
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261 <Hsp_positive>584</Hsp_positive> |
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262 <Hsp_gaps>2</Hsp_gaps> |
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263 <Hsp_align-len>744</Hsp_align-len> |
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264 <Hsp_qseq>MKALILYDHIREEHFKVTDDNKTRLNLFNTQNGKTLKMLLERCSGLVRDNSRKDYDIDFVYKAIPTPVTNNYGKIVKYQDVKQTEVKPYYSELTKRIIDNNYDIIVPLGKLGIKFLLNVTKLGSVRGVPHKITLSTENTSKGVWVLPTYSIEYTNVNKNAERHVVTDLNLLGKFVKNGEEAFKPKKVSYELVTDIERVREIFTKEVKKDNNDGIDITAWDTETNSLKPDRAGSKVLVVSLSWKNGQGVTIPIYKSDFNWKNGQKDIDEILSYLREWLADKEDIKVGHNIKYDIKFLMSTLGFNTFENNQDTLVGWYLAVTQETTDSKRLSDLAYEVTDMGGYDTPLEEFKKWFSRKLLKFLSEKMSTIIKDNKSIAKKEHNIKATEYKNWLSENISVDKEVELDKYEQKTEMNSTDKQYIQLGLHPERLTKTMLMGDSEFEEVAKLSDEYMSLSDEGKEYTLKTALELINRFKKHTDVYNEVDGGKFNYDWIPLELMHPYASGDVDVCRRIYSNILEKLKDQQRPKAIKLWQQDYPRLDRTLARIESNGLYADLDYMEKNDKAYELELTKIENKIREHWAVKEFEEEKYNLYELGLEEFSKPKKERDPEIEKYRNKYKDDGWKFNIGSGDHKSELLYKILGFELPYDQNYVKATSFEKK-KEQDISWEDYKTDTKALGYILSDLEVTEDNKELIEDLLYYASIRTKRNSFTHKLPRMVNKNTQTLHGSFSSTTTSTGRLASSNP</Hsp_qseq> |
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265 <Hsp_hseq>MKVLILFDHIREEHFSVSKDGSVKSNVLNTPNGKTLKKLLEKCSNLKRDKTNRDYDIDFLYNAVPTPIRNDYGKIIKYQDVKQAEVKPYYERMNNIIIDNSYDMVIPVGKLGVKYLLNVTAIGKVRGVPSKVTIENGTSSHDVWVLPTYSIEYTNVNKNSERHVVSDLQTVGKFVEQGEEAFKPKEVSYELVDNIERVREIFNKEVKNDNYDGVDITAWDLETNSLKPDKEGSKPLVLSLSWRNGQGVTIPLYKSDFNWENGQDDIDEVLELLKNWLASKEDIKVAHNGKYDIKFLMSTENFKDFESIQDTKVGWYLAVTQEVKESLRLSDLAYEVTDVGGYDKPLEDFKLWFVTKLLRFFSDKIKEIQKENKKIAKKEYDVKAPEYKEWL-ENKLNETVVELDDTEKKFRVSELEKKYIQLGLSPEIVNMNLVMDNDEFINIAEQSPEYMGLSDYAKSYTLNTAINLINEYRDVKDVVNDIDGGNFNYDWFPIELMHPYASGDTDVCRRIHCDVIKKLKEQDRPKSMHLLEVNYPRLTKSLARIESNGLYCDLDYMKENDESYESEMAKNHATMREHWAVKEFEEYQYNLYQMALEEHEKKPKDRDKDIHQYRDKFKDGKWMFSPSSGDHKGRVIYDILGIQLPYDKEYVKEKPFNANVKEADLTWQDYKTDKKAIGYALDNLELKDDVKELLELLKYHASMQTKRNSFTKKLLNMINKQKRTLHGSFSETGTETSRLSSSNP</Hsp_hseq> |
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266 <Hsp_midline>MK LIL+DHIREEHF V+ D + N+ NT NGKTLK LLE+CS L RD + +DYDIDF+Y A+PTP+ N+YGKI+KYQDVKQ EVKPYY + IIDN+YD+++P+GKLG+K+LLNVT +G VRGVP K+T+ +S VWVLPTYSIEYTNVNKN+ERHVV+DL +GKFV+ GEEAFKPK+VSYELV +IERVREIF KEVK DN DG+DITAWD ETNSLKPD+ GSK LV+SLSW+NGQGVTIP+YKSDFNW+NGQ DIDE+L L+ WLA KEDIKV HN KYDIKFLMST F FE+ QDT VGWYLAVTQE +S RLSDLAYEVTD+GGYD PLE+FK WF KLL+F S+K+ I K+NK IAKKE+++KA EYK WL EN + VELD E+K ++ +K+YIQLGL PE + ++M + EF +A+ S EYM LSD K YTL TA+ LIN ++ DV N++DGG FNYDW P+ELMHPYASGD DVCRRI+ ++++KLK+Q RPK++ L + +YPRL ++LARIESNGLY DLDYM++ND++YE E+ K +REHWAVKEFEE +YNLY++ LEE K K+RD +I +YR+K+KD W F+ SGDHK ++Y ILG +LPYD+ YVK F KE D++W+DYKTD KA+GY L +LE+ +D KEL+E L Y+AS++TKRNSFT KL M+NK +TLHGSFS T T T RL+SSNP</Hsp_midline> |
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267 </Hsp> |
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268 </Hit_hsps> |
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269 </Hit> |
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270 <Hit> |
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271 <Hit_num>2</Hit_num> |
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272 <Hit_id>gnl|BL_ORD_ID|1041</Hit_id> |
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273 <Hit_def>org_id=NC_011421.1_protein_id=YP_002300417.1 gene=31 locus_tag=SPO1_146 protein=gp31</Hit_def> |
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274 <Hit_accession>1041</Hit_accession> |
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275 <Hit_len>925</Hit_len> |
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276 <Hit_hsps> |
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277 <Hsp> |
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278 <Hsp_num>1</Hsp_num> |
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279 <Hsp_bit-score>70.8626</Hsp_bit-score> |
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280 <Hsp_score>172</Hsp_score> |
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281 <Hsp_evalue>8.59641e-14</Hsp_evalue> |
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282 <Hsp_query-from>103</Hsp_query-from> |
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283 <Hsp_query-to>347</Hsp_query-to> |
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284 <Hsp_hit-from>105</Hsp_hit-from> |
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285 <Hsp_hit-to>352</Hsp_hit-to> |
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286 <Hsp_query-frame>0</Hsp_query-frame> |
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287 <Hsp_hit-frame>0</Hsp_hit-frame> |
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288 <Hsp_identity>78</Hsp_identity> |
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289 <Hsp_positive>120</Hsp_positive> |
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290 <Hsp_gaps>47</Hsp_gaps> |
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291 <Hsp_align-len>270</Hsp_align-len> |
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292 <Hsp_qseq>DIIVPLGKLGIKFLLNVTKLGSVRGVPHKITLSTENTSKGVWVLPTYSIEYTNVNKNAERHVVTDLNLL-----GKFVKNG-------------EEAFKPKKVSYEL------VTDIERVREIFTKEVKKDNNDGIDITAWDTETNSLKPDRAGSKVLVVSLSWKNGQGVTIPIYKSDFNWKNGQKDIDEILSYLREWLADKEDIK-VGHNIKYDIKFLMSTLGFNTFENNQDTLVGWYLAVTQETTDSKRLSDLAYEVTDMGGYDTPLE</Hsp_qseq> |
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293 <Hsp_hseq>DIIIPTGNLSLKFLTKMTAITKVRGKLYEI--------EGRKFFPMIHPNTVLKQPKYQDFFIKDLEILASLLEGKTPKNVLAFTKERRYCDTFEDAIDEIKRYLELPAGSRVVIDLETVK----------TNPFIEKVTMKKTTLEAYPMSQQPKIVGIGLSDRSGYGCAIPLYHRE-NLMPGNQ-IGTIVKFLRK-LLEREDLEFIAHNGKFDIRWLRASLDIYLDTLIWDTMLIHYLCITEE-KGTHGLKDLAWLETDMGGYDDALD</Hsp_hseq> |
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294 <Hsp_midline>DII+P G L +KFL +T + VRG ++I +G P + + DL +L GK KN E+A K EL V D+E V+ N I+ T P K++ + LS ++G G IP+Y + N G + I I+ +LR+ L ++ED++ + HN K+DI++L ++L DT++ YL +T+E + L DLA+ TDMGGYD L+</Hsp_midline> |
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295 </Hsp> |
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296 <Hsp> |
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297 <Hsp_num>2</Hsp_num> |
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298 <Hsp_bit-score>60.077</Hsp_bit-score> |
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299 <Hsp_score>144</Hsp_score> |
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300 <Hsp_evalue>2.09898e-10</Hsp_evalue> |
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301 <Hsp_query-from>488</Hsp_query-from> |
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302 <Hsp_query-to>743</Hsp_query-to> |
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303 <Hsp_hit-from>363</Hsp_hit-from> |
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304 <Hsp_hit-to>597</Hsp_hit-to> |
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305 <Hsp_query-frame>0</Hsp_query-frame> |
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306 <Hsp_hit-frame>0</Hsp_hit-frame> |
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307 <Hsp_identity>65</Hsp_identity> |
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308 <Hsp_positive>113</Hsp_positive> |
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309 <Hsp_gaps>31</Hsp_gaps> |
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310 <Hsp_align-len>261</Hsp_align-len> |
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311 <Hsp_qseq>NYDWIPLELMHPYASGDVDVCRRIYSNILEKLKDQQRPKAIKLWQQDYPRLDRTLARIESNGLYADLDYMEKNDKAYELELTKIENKIREHWAVKEFEEEKYNLYELGLEEFSKPKKERDPEIEKYRNKY-----KDDGWKFNIGSGDHKSELLYKILGFELPYDQNYVKATSFEKKKEQDISWEDYKTDTKALGYILSDLEVTEDNKELIEDLLYYASIRTKRNSFTHKLPRMVNKNTQTLHGSFSSTTTSTGRLASSNP</Hsp_qseq> |
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312 <Hsp_hseq>NYDLIPWDILKVYLADDCDVTFRLSEKYIPLVEENEEKKW--LWENIMVPGYYTLLDIEMDGIHVDREWLEVLRVSYEKEISRLEDKMREFPEVVAMEREMRDKWKERVMIGNIKSANRTPEQQDKFKKYKKYDPSKGGDKINFGSTKQLGELLFERMGLE---------TVIF--------------TDKGAPSTNDDSLKFMGSQSDFVKVLMEFRKANHLYNNFVSKLSLMIDPD-NIVHPSYNIHGTVTGRLSSNEP</Hsp_hseq> |
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313 <Hsp_midline>NYD IP +++ Y + D DV R+ + +++ + K LW+ TL IE +G++ D +++E +YE E++++E+K+RE V E E + ++ + + R PE + KY G K N GS ELL++ +G E F TD A L+ + ++ L+ + N+F KL M++ + +H S++ T TGRL+S+ P</Hsp_midline> |
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314 </Hsp> |
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315 </Hit_hsps> |
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316 </Hit> |
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317 <Hit> |
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318 <Hit_num>3</Hit_num> |
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319 <Hit_id>gnl|BL_ORD_ID|1525</Hit_id> |
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320 <Hit_def>org_id=NC_005859.1_protein_id=YP_006950.1 gene=pol locus_tag=T5.122 protein=DNA polymerase</Hit_def> |
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321 <Hit_accession>1525</Hit_accession> |
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322 <Hit_len>855</Hit_len> |
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323 <Hit_hsps> |
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324 <Hsp> |
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325 <Hsp_num>1</Hsp_num> |
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326 <Hsp_bit-score>48.9062</Hsp_bit-score> |
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327 <Hsp_score>115</Hsp_score> |
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328 <Hsp_evalue>5.47218e-07</Hsp_evalue> |
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329 <Hsp_query-from>175</Hsp_query-from> |
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330 <Hsp_query-to>355</Hsp_query-to> |
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331 <Hsp_hit-from>124</Hsp_hit-from> |
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332 <Hsp_hit-to>290</Hsp_hit-to> |
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333 <Hsp_query-frame>0</Hsp_query-frame> |
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334 <Hsp_hit-frame>0</Hsp_hit-frame> |
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335 <Hsp_identity>59</Hsp_identity> |
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336 <Hsp_positive>87</Hsp_positive> |
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337 <Hsp_gaps>28</Hsp_gaps> |
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338 <Hsp_align-len>188</Hsp_align-len> |
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339 <Hsp_qseq>VKNGEEAFKPKKVSYELVTDIERVREIFTKEVKKDNNDGIDITAWDTETNSLKPDRAGSKVLVVSLSWKNGQGVTIPIYKSDFNWKNGQKDIDEILSYLREWLADKED-IKVGHNIKYDIKFLMSTLGFNTFENNQ------DTLVGWYLAVTQETTDSKRLSDLAYEVTDMGGYDTPLEEFKKWFSR</Hsp_qseq> |
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340 <Hsp_hseq>IINGREKIA-KAGDYRPITDPDEAEEY----IKMVYNMVIGPVAFDSETSALYC-RDGY-LLGVSISHQEYQGVYI---DSDC--------LTEVAVYYLQKILDSENHTIVFHNLKFDMHFYKYHLGL-TFDKAHKERRLHDTMLQHY--VLDERRGTHGLKSLAMKYTDMGDYDFELDKFKDDYCK</Hsp_hseq> |
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341 <Hsp_midline>+ NG E K Y +TD + E +K N I A+D+ET++L R G +L VS+S + QGV I SD + E+ Y + + D E+ V HN+K+D+ F LG TF+ DT++ Y V E + L LA + TDMG YD L++FK + +</Hsp_midline> |
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342 </Hsp> |
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343 <Hsp> |
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344 <Hsp_num>2</Hsp_num> |
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345 <Hsp_bit-score>41.2022</Hsp_bit-score> |
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346 <Hsp_score>95</Hsp_score> |
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347 <Hsp_evalue>0.000126355</Hsp_evalue> |
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348 <Hsp_query-from>487</Hsp_query-from> |
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349 <Hsp_query-to>588</Hsp_query-to> |
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350 <Hsp_hit-from>299</Hsp_hit-from> |
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351 <Hsp_hit-to>398</Hsp_hit-to> |
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352 <Hsp_query-frame>0</Hsp_query-frame> |
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353 <Hsp_hit-frame>0</Hsp_hit-frame> |
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354 <Hsp_identity>27</Hsp_identity> |
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355 <Hsp_positive>49</Hsp_positive> |
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356 <Hsp_gaps>2</Hsp_gaps> |
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357 <Hsp_align-len>102</Hsp_align-len> |
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358 <Hsp_qseq>FNYDWIPLELMHPYASGDVDVCRRIYSNILEKLKDQQRPKAIKLWQQDYPRLDRTLARIESNGLYADLDYMEKNDKAYELELTKIENKIREHWAVKEFEEEK</Hsp_qseq> |
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359 <Hsp_hseq>FTYDLIPFDIMWPYAAKDTDATIRLHNFFLPKIEKNE--KLCSLYYDVLMPGCVFLQRVEDRGVPISIDRLKEAQYQLTHNLNKAREKLYTYPEVKQLEQDQ</Hsp_hseq> |
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360 <Hsp_midline>F YD IP ++M PYA+ D D R+++ L K++ + K L+ L R+E G+ +D +++ L K K+ + VK+ E+++</Hsp_midline> |
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361 </Hsp> |
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362 </Hit_hsps> |
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363 </Hit> |
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364 </Iteration_hits> |
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365 <Iteration_stat> |
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366 <Statistics> |
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367 <Statistics_db-num>3263</Statistics_db-num> |
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368 <Statistics_db-len>679396</Statistics_db-len> |
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369 <Statistics_hsp-len>85</Statistics_hsp-len> |
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370 <Statistics_eff-space>264542978</Statistics_eff-space> |
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371 <Statistics_kappa>0.041</Statistics_kappa> |
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372 <Statistics_lambda>0.267</Statistics_lambda> |
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373 <Statistics_entropy>0.14</Statistics_entropy> |
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374 </Statistics> |
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375 </Iteration_stat> |
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376 </Iteration> |
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377 <Iteration> |
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378 <Iteration_iter-num>3</Iteration_iter-num> |
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379 <Iteration_query-ID>Query_3</Iteration_query-ID> |
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380 <Iteration_query-def>7c517a1c-a495-4766-b6e7-bf4e6e496e94 [Location=[3702:3969](-);Name=7c517a1c-a495-4766-b6e7-bf4e6e496e94]</Iteration_query-def> |
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381 <Iteration_query-len>88</Iteration_query-len> |
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382 <Iteration_hits> |
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383 </Iteration_hits> |
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384 <Iteration_stat> |
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385 <Statistics> |
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386 <Statistics_db-num>3263</Statistics_db-num> |
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387 <Statistics_db-len>679396</Statistics_db-len> |
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388 <Statistics_hsp-len>54</Statistics_hsp-len> |
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389 <Statistics_eff-space>17108596</Statistics_eff-space> |
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390 <Statistics_kappa>0.041</Statistics_kappa> |
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391 <Statistics_lambda>0.267</Statistics_lambda> |
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392 <Statistics_entropy>0.14</Statistics_entropy> |
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393 </Statistics> |
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394 </Iteration_stat> |
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395 <Iteration_message>No hits found</Iteration_message> |
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396 </Iteration> |
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397 <Iteration> |
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398 <Iteration_iter-num>4</Iteration_iter-num> |
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399 <Iteration_query-ID>Query_4</Iteration_query-ID> |
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400 <Iteration_query-def>16fa145a-c4f5-465d-803e-00e622dadabf [Location=[3987:4248](-);Name=16fa145a-c4f5-465d-803e-00e622dadabf]</Iteration_query-def> |
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401 <Iteration_query-len>86</Iteration_query-len> |
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402 <Iteration_hits> |
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403 </Iteration_hits> |
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404 <Iteration_stat> |
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405 <Statistics> |
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406 <Statistics_db-num>3263</Statistics_db-num> |
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407 <Statistics_db-len>679396</Statistics_db-len> |
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408 <Statistics_hsp-len>53</Statistics_hsp-len> |
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409 <Statistics_eff-space>16713081</Statistics_eff-space> |
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410 <Statistics_kappa>0.041</Statistics_kappa> |
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411 <Statistics_lambda>0.267</Statistics_lambda> |
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412 <Statistics_entropy>0.14</Statistics_entropy> |
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413 </Statistics> |
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414 </Iteration_stat> |
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415 <Iteration_message>No hits found</Iteration_message> |
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416 </Iteration> |
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417 <Iteration> |
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418 <Iteration_iter-num>5</Iteration_iter-num> |
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419 <Iteration_query-ID>Query_5</Iteration_query-ID> |
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420 <Iteration_query-def>6c69f92d-f84b-4aa2-a019-1a0dca0dedc1 [Location=[4323:4662](-);Name=6c69f92d-f84b-4aa2-a019-1a0dca0dedc1]</Iteration_query-def> |
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421 <Iteration_query-len>112</Iteration_query-len> |
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422 <Iteration_hits> |
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423 </Iteration_hits> |
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424 <Iteration_stat> |
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425 <Statistics> |
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426 <Statistics_db-num>3263</Statistics_db-num> |
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427 <Statistics_db-len>679396</Statistics_db-len> |
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428 <Statistics_hsp-len>67</Statistics_hsp-len> |
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429 <Statistics_eff-space>20734875</Statistics_eff-space> |
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430 <Statistics_kappa>0.041</Statistics_kappa> |
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431 <Statistics_lambda>0.267</Statistics_lambda> |
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432 <Statistics_entropy>0.14</Statistics_entropy> |
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433 </Statistics> |
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434 </Iteration_stat> |
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435 <Iteration_message>No hits found</Iteration_message> |
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436 </Iteration> |
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437 <Iteration> |
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438 <Iteration_iter-num>6</Iteration_iter-num> |
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439 <Iteration_query-ID>Query_6</Iteration_query-ID> |
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440 <Iteration_query-def>18da672c-2608-4b85-9593-f47e974d9e92 [Location=[4674:4806](-);Name=18da672c-2608-4b85-9593-f47e974d9e92]</Iteration_query-def> |
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441 <Iteration_query-len>43</Iteration_query-len> |
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442 <Iteration_hits> |
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443 </Iteration_hits> |
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444 <Iteration_stat> |
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445 <Statistics> |
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446 <Statistics_db-num>3263</Statistics_db-num> |
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447 <Statistics_db-len>679396</Statistics_db-len> |
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448 <Statistics_hsp-len>16</Statistics_hsp-len> |
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449 <Statistics_eff-space>16934076</Statistics_eff-space> |
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450 <Statistics_kappa>0.041</Statistics_kappa> |
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451 <Statistics_lambda>0.267</Statistics_lambda> |
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452 <Statistics_entropy>0.14</Statistics_entropy> |
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453 </Statistics> |
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454 </Iteration_stat> |
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455 <Iteration_message>No hits found</Iteration_message> |
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456 </Iteration> |
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457 <Iteration> |
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458 <Iteration_iter-num>7</Iteration_iter-num> |
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459 <Iteration_query-ID>Query_7</Iteration_query-ID> |
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460 <Iteration_query-def>43236bf1-dc36-4e3e-840e-4e57348f3e4f [Location=[4895:5150](-);Name=43236bf1-dc36-4e3e-840e-4e57348f3e4f]</Iteration_query-def> |
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461 <Iteration_query-len>84</Iteration_query-len> |
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462 <Iteration_hits> |
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463 </Iteration_hits> |
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464 <Iteration_stat> |
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465 <Statistics> |
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466 <Statistics_db-num>3263</Statistics_db-num> |
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467 <Statistics_db-len>679396</Statistics_db-len> |
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468 <Statistics_hsp-len>51</Statistics_hsp-len> |
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469 <Statistics_eff-space>16928439</Statistics_eff-space> |
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470 <Statistics_kappa>0.041</Statistics_kappa> |
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471 <Statistics_lambda>0.267</Statistics_lambda> |
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472 <Statistics_entropy>0.14</Statistics_entropy> |
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473 </Statistics> |
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474 </Iteration_stat> |
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475 <Iteration_message>No hits found</Iteration_message> |
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476 </Iteration> |
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477 <Iteration> |
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478 <Iteration_iter-num>8</Iteration_iter-num> |
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479 <Iteration_query-ID>Query_8</Iteration_query-ID> |
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480 <Iteration_query-def>1a1776cd-92f9-4259-b982-e273663bda40 [Location=[5152:5677](-);Name=1a1776cd-92f9-4259-b982-e273663bda40]</Iteration_query-def> |
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481 <Iteration_query-len>174</Iteration_query-len> |
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482 <Iteration_hits> |
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483 <Hit> |
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484 <Hit_num>1</Hit_num> |
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485 <Hit_id>gnl|BL_ORD_ID|492</Hit_id> |
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486 <Hit_def>org_id=NC_005880.2_protein_id=YP_009041255.1 locus_tag=CPT_phageK_gp233 protein=hypothetical protein</Hit_def> |
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487 <Hit_accession>492</Hit_accession> |
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488 <Hit_len>182</Hit_len> |
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489 <Hit_hsps> |
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490 <Hsp> |
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491 <Hsp_num>1</Hsp_num> |
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492 <Hsp_bit-score>75.0998</Hsp_bit-score> |
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493 <Hsp_score>183</Hsp_score> |
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494 <Hsp_evalue>1.38504e-18</Hsp_evalue> |
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495 <Hsp_query-from>15</Hsp_query-from> |
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496 <Hsp_query-to>171</Hsp_query-to> |
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497 <Hsp_hit-from>30</Hsp_hit-from> |
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498 <Hsp_hit-to>181</Hsp_hit-to> |
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499 <Hsp_query-frame>0</Hsp_query-frame> |
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500 <Hsp_hit-frame>0</Hsp_hit-frame> |
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501 <Hsp_identity>59</Hsp_identity> |
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502 <Hsp_positive>89</Hsp_positive> |
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503 <Hsp_gaps>9</Hsp_gaps> |
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504 <Hsp_align-len>159</Hsp_align-len> |
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505 <Hsp_qseq>ELIGKTNDEEVAKYYRDNYDADFNSMINYINTDDIGIVDKDNLNDTQRYFVYNQQINLKRVNHYFEMQELKEDSQYRQEFFNTRKFDILEEGSFEINFVSHSRNELDV-YIRYTT-DDENLNFNSIVNLLLPTIQFILTQAKKADIRSTDKIRTMINQL</Hsp_qseq> |
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506 <Hsp_hseq>EILGYTDSLEDAEYIRDNYGTS-----NPIFINEYPYITKEKLIEEQRYFRYNSYIELKRVNGYFEISEIN-DLQVTED-FSINKDDKNFDSPFSINMFSHNRNSIGIEFIMFSEYDDKEDIIEKEKNSFLMKLKYLLKHSKEADIRSTSKIIDSIDKL</Hsp_hseq> |
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507 <Hsp_midline>E++G T+ E A+Y RDNY N I ++ + K+ L + QRYF YN I LKRVN YFE+ E+ D Q ++ F+ K D + F IN SH+RN + + +I ++ DD+ N L ++++L +K+ADIRST KI I++L</Hsp_midline> |
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508 </Hsp> |
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509 </Hit_hsps> |
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510 </Hit> |
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511 </Iteration_hits> |
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512 <Iteration_stat> |
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513 <Statistics> |
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514 <Statistics_db-num>3263</Statistics_db-num> |
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515 <Statistics_db-len>679396</Statistics_db-len> |
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516 <Statistics_hsp-len>72</Statistics_hsp-len> |
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517 <Statistics_eff-space>45334920</Statistics_eff-space> |
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518 <Statistics_kappa>0.041</Statistics_kappa> |
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519 <Statistics_lambda>0.267</Statistics_lambda> |
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520 <Statistics_entropy>0.14</Statistics_entropy> |
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521 </Statistics> |
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522 </Iteration_stat> |
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523 </Iteration> |
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524 <Iteration> |
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525 <Iteration_iter-num>9</Iteration_iter-num> |
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526 <Iteration_query-ID>Query_9</Iteration_query-ID> |
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527 <Iteration_query-def>2844dbc1-21f9-43bc-9375-f99e0d138011 [Location=[5822:6497](+);Name=2844dbc1-21f9-43bc-9375-f99e0d138011]</Iteration_query-def> |
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528 <Iteration_query-len>224</Iteration_query-len> |
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529 <Iteration_hits> |
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530 </Iteration_hits> |
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531 <Iteration_stat> |
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532 <Statistics> |
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533 <Statistics_db-num>3263</Statistics_db-num> |
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534 <Statistics_db-len>679396</Statistics_db-len> |
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535 <Statistics_hsp-len>75</Statistics_hsp-len> |
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536 <Statistics_eff-space>64765979</Statistics_eff-space> |
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537 <Statistics_kappa>0.041</Statistics_kappa> |
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538 <Statistics_lambda>0.267</Statistics_lambda> |
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539 <Statistics_entropy>0.14</Statistics_entropy> |
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540 </Statistics> |
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541 </Iteration_stat> |
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542 <Iteration_message>No hits found</Iteration_message> |
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543 </Iteration> |
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544 <Iteration> |
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545 <Iteration_iter-num>10</Iteration_iter-num> |
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546 <Iteration_query-ID>Query_10</Iteration_query-ID> |
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547 <Iteration_query-def>2cc12d90-6045-43fe-9bf8-ec59b118608d [Location=[6583:6928](+);Name=2cc12d90-6045-43fe-9bf8-ec59b118608d]</Iteration_query-def> |
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548 <Iteration_query-len>114</Iteration_query-len> |
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549 <Iteration_hits> |
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550 </Iteration_hits> |
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551 <Iteration_stat> |
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552 <Statistics> |
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553 <Statistics_db-num>3263</Statistics_db-num> |
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554 <Statistics_db-len>679396</Statistics_db-len> |
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555 <Statistics_hsp-len>67</Statistics_hsp-len> |
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556 <Statistics_eff-space>21656425</Statistics_eff-space> |
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557 <Statistics_kappa>0.041</Statistics_kappa> |
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558 <Statistics_lambda>0.267</Statistics_lambda> |
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559 <Statistics_entropy>0.14</Statistics_entropy> |
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560 </Statistics> |
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561 </Iteration_stat> |
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562 <Iteration_message>No hits found</Iteration_message> |
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563 </Iteration> |
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564 <Iteration> |
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565 <Iteration_iter-num>11</Iteration_iter-num> |
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566 <Iteration_query-ID>Query_11</Iteration_query-ID> |
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567 <Iteration_query-def>ad489dc9-8a65-4f30-8320-7afae7ce58dd [Location=[7069:7405](+);Name=ad489dc9-8a65-4f30-8320-7afae7ce58dd]</Iteration_query-def> |
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568 <Iteration_query-len>111</Iteration_query-len> |
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569 <Iteration_hits> |
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570 </Iteration_hits> |
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571 <Iteration_stat> |
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572 <Statistics> |
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573 <Statistics_db-num>3263</Statistics_db-num> |
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574 <Statistics_db-len>679396</Statistics_db-len> |
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575 <Statistics_hsp-len>66</Statistics_hsp-len> |
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576 <Statistics_eff-space>20881710</Statistics_eff-space> |
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577 <Statistics_kappa>0.041</Statistics_kappa> |
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578 <Statistics_lambda>0.267</Statistics_lambda> |
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579 <Statistics_entropy>0.14</Statistics_entropy> |
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580 </Statistics> |
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581 </Iteration_stat> |
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582 <Iteration_message>No hits found</Iteration_message> |
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583 </Iteration> |
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584 <Iteration> |
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585 <Iteration_iter-num>12</Iteration_iter-num> |
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586 <Iteration_query-ID>Query_12</Iteration_query-ID> |
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587 <Iteration_query-def>5a9f4aba-df33-4073-a2bf-c14979f70ab1 [Location=[7429:7630](+);Name=5a9f4aba-df33-4073-a2bf-c14979f70ab1]</Iteration_query-def> |
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588 <Iteration_query-len>66</Iteration_query-len> |
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589 <Iteration_hits> |
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590 </Iteration_hits> |
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591 <Iteration_stat> |
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592 <Statistics> |
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593 <Statistics_db-num>3263</Statistics_db-num> |
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594 <Statistics_db-len>679396</Statistics_db-len> |
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595 <Statistics_hsp-len>36</Statistics_hsp-len> |
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596 <Statistics_eff-space>16857840</Statistics_eff-space> |
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597 <Statistics_kappa>0.041</Statistics_kappa> |
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598 <Statistics_lambda>0.267</Statistics_lambda> |
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599 <Statistics_entropy>0.14</Statistics_entropy> |
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600 </Statistics> |
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601 </Iteration_stat> |
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602 <Iteration_message>No hits found</Iteration_message> |
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603 </Iteration> |
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604 <Iteration> |
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605 <Iteration_iter-num>13</Iteration_iter-num> |
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606 <Iteration_query-ID>Query_13</Iteration_query-ID> |
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607 <Iteration_query-def>1f13b609-c0f3-45be-a72a-ff3fa89220a2 [Location=[7895:8717](+);Name=1f13b609-c0f3-45be-a72a-ff3fa89220a2]</Iteration_query-def> |
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608 <Iteration_query-len>273</Iteration_query-len> |
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609 <Iteration_hits> |
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610 <Hit> |
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611 <Hit_num>1</Hit_num> |
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612 <Hit_id>gnl|BL_ORD_ID|602</Hit_id> |
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613 <Hit_def>org_id=NC_005880.2_protein_id=YP_009041365.1 locus_tag=CPT_phageK_gp123 protein=putative HNH endonuclease</Hit_def> |
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614 <Hit_accession>602</Hit_accession> |
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615 <Hit_len>269</Hit_len> |
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616 <Hit_hsps> |
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617 <Hsp> |
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618 <Hsp_num>1</Hsp_num> |
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619 <Hsp_bit-score>352.058</Hsp_bit-score> |
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620 <Hsp_score>902</Hsp_score> |
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621 <Hsp_evalue>1.57941e-124</Hsp_evalue> |
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622 <Hsp_query-from>5</Hsp_query-from> |
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623 <Hsp_query-to>271</Hsp_query-to> |
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624 <Hsp_hit-from>1</Hsp_hit-from> |
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625 <Hsp_hit-to>267</Hsp_hit-to> |
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626 <Hsp_query-frame>0</Hsp_query-frame> |
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627 <Hsp_hit-frame>0</Hsp_hit-frame> |
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|
628 <Hsp_identity>172</Hsp_identity> |
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629 <Hsp_positive>212</Hsp_positive> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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630 <Hsp_gaps>4</Hsp_gaps> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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631 <Hsp_align-len>269</Hsp_align-len> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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changeset
|
632 <Hsp_qseq>MGKAQRLGVEVAQPIHTHESKDIISVVGNSKEEYMKEVWKDY--DDKYKVSNTGRVINKITKHELKPWIINSGYKQVTVTEGNILVHRLVAKLFIPNNNPNLNVVNHIDNNRLNNHVNNLEWVDYRGNTLHSAKQGRQNTYSAREQLKKVSNKAVYQKDMEGNIVKVWDSPTQAQRETGGYFSPSKISQVISGRHKSHKGYKWEYVNKESKRSKNMKIDVFDLDGNLLYTKYSMNKVMKLLNMNNHKTLRDKLRKTDDFVEYKGYKFRN</Hsp_qseq> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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changeset
|
633 <Hsp_hseq>MGKVQRLGVETIQSIHTHESKGIISVVGNNKESYMKEIWKKVVGFENYEVSNKGKVRNIKTNYILKPWIINSGYEQVSIGIANVLVHRLVAMTFIPTDS--YSIVNHIDNNKLNNCVENLEWVSYKGNSAHANKQGRLNTYSAREKLSSVSKKAIYQKDMEGNIIKLWDSPSEAEKESNGYFKSTKISSVAHGKRKHHRSYTWEYVYKDSKRSLNKSINMYDLNNNLLYEDLTMNKIMGILEMNNHKTLRDKLRNTDDFVEYRGYKFKN</Hsp_hseq> |
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|
634 <Hsp_midline>MGK QRLGVE Q IHTHESK IISVVGN+KE YMKE+WK + Y+VSN G+V N T + LKPWIINSGY+QV++ N+LVHRLVA FIP ++ ++VNHIDNN+LNN V NLEWV Y+GN+ H+ KQGR NTYSARE+L VS KA+YQKDMEGNI+K+WDSP++A++E+ GYF +KIS V G+ K H+ Y WEYV K+SKRS N I+++DL+ NLLY +MNK+M +L MNNHKTLRDKLR TDDFVEY+GYKF+N</Hsp_midline> |
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635 </Hsp> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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636 </Hit_hsps> |
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637 </Hit> |
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638 <Hit> |
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639 <Hit_num>2</Hit_num> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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640 <Hit_id>gnl|BL_ORD_ID|1042</Hit_id> |
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641 <Hit_def>org_id=NC_011421.1_protein_id=YP_002300418.1 gene=31.2 locus_tag=SPO1_147 protein=gp31.2</Hit_def> |
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642 <Hit_accession>1042</Hit_accession> |
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643 <Hit_len>174</Hit_len> |
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644 <Hit_hsps> |
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645 <Hsp> |
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646 <Hsp_num>1</Hsp_num> |
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647 <Hsp_bit-score>68.9366</Hsp_bit-score> |
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648 <Hsp_score>167</Hsp_score> |
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649 <Hsp_evalue>1.76334e-15</Hsp_evalue> |
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650 <Hsp_query-from>43</Hsp_query-from> |
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651 <Hsp_query-to>207</Hsp_query-to> |
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652 <Hsp_hit-from>3</Hsp_hit-from> |
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653 <Hsp_hit-to>170</Hsp_hit-to> |
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654 <Hsp_query-frame>0</Hsp_query-frame> |
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655 <Hsp_hit-frame>0</Hsp_hit-frame> |
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656 <Hsp_identity>57</Hsp_identity> |
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657 <Hsp_positive>80</Hsp_positive> |
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658 <Hsp_gaps>11</Hsp_gaps> |
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659 <Hsp_align-len>172</Hsp_align-len> |
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660 <Hsp_qseq>WKD---YDDKYKVSNTGRVINKITKHELKPWIINSGYKQVTVTEGN----ILVHRLVAKLFIPNNNPNLNVVNHIDNNRLNNHVNNLEWVDYRGNTLHSAKQGRQNTYSAREQLKKVSNKAVYQKDMEGNIVKVWDSPTQAQRETGGYFSPSKISQVISGRHKSHKGYKWEY</Hsp_qseq> |
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661 <Hsp_hseq>WKDIKGYEGHYQVSNTGEVYSIKSGKTLKHQIPKDGYHRIGLFKGGKGKTFQVHRLVAIHFCEGYEEGL-VVDHKDGNKDNNLSTNLRWVTQKINVENQMSRGTLNVSKA-QQIAKIKNQKPIIVISPDGIEKEYPSTKCACEELG--LTRGKVTDVLKGHRIHHKGYTFRY</Hsp_hseq> |
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662 <Hsp_midline>WKD Y+ Y+VSNTG V + + LK I GY ++ + +G VHRLVA F L VV+H D N+ NN NL WV + N + +G N A +Q+ K+ N+ I K + S A E G + K++ V+ G HKGY + Y</Hsp_midline> |
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663 </Hsp> |
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664 </Hit_hsps> |
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665 </Hit> |
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666 <Hit> |
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667 <Hit_num>3</Hit_num> |
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668 <Hit_id>gnl|BL_ORD_ID|531</Hit_id> |
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669 <Hit_def>org_id=NC_005880.2_protein_id=YP_009041294.1 locus_tag=CPT_phageK_gp194 protein=putative HNH endonuclease</Hit_def> |
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670 <Hit_accession>531</Hit_accession> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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671 <Hit_len>166</Hit_len> |
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672 <Hit_hsps> |
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673 <Hsp> |
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674 <Hsp_num>1</Hsp_num> |
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675 <Hsp_bit-score>56.6102</Hsp_bit-score> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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676 <Hsp_score>135</Hsp_score> |
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677 <Hsp_evalue>3.47611e-11</Hsp_evalue> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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678 <Hsp_query-from>88</Hsp_query-from> |
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679 <Hsp_query-to>205</Hsp_query-to> |
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680 <Hsp_hit-from>57</Hsp_hit-from> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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681 <Hsp_hit-to>163</Hsp_hit-to> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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682 <Hsp_query-frame>0</Hsp_query-frame> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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683 <Hsp_hit-frame>0</Hsp_hit-frame> |
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684 <Hsp_identity>44</Hsp_identity> |
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685 <Hsp_positive>59</Hsp_positive> |
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686 <Hsp_gaps>13</Hsp_gaps> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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687 <Hsp_align-len>119</Hsp_align-len> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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688 <Hsp_qseq>VHRLVAKLFIPNNNPNLNVVNHIDNNRLNNHVNNLEWVDYRGNTLHSAKQGRQNTYSAREQLKKVSNKAVYQKDMEGNIVKVWDSPTQAQRETGGYFSPS-KISQVISGRHKSHKGYKW</Hsp_qseq> |
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689 <Hsp_hseq>IHRLVAMAFIPNPD-NKEQVNHL-NGKNDNSVGNLEWVSNSENREHAIKTG----------LKNEINYNIAQYDLEGNLLNVFYTAQEALEFLGISNKRSGNIGRCIKGERKTAYGYIW</Hsp_hseq> |
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690 <Hsp_midline>+HRLVA FIPN + N VNH+ N + +N V NLEWV N H+ K G LK N + Q D+EGN++ V+ + +A G S I + I G K+ GY W</Hsp_midline> |
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691 </Hsp> |
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692 </Hit_hsps> |
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693 </Hit> |
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694 <Hit> |
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695 <Hit_num>4</Hit_num> |
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696 <Hit_id>gnl|BL_ORD_ID|684</Hit_id> |
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697 <Hit_def>org_id=NC_005880.2_protein_id=YP_009041447.1 locus_tag=CPT_phageK_gp041 protein=putative HNH endonuclease</Hit_def> |
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698 <Hit_accession>684</Hit_accession> |
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699 <Hit_len>162</Hit_len> |
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700 <Hit_hsps> |
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701 <Hsp> |
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702 <Hsp_num>1</Hsp_num> |
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703 <Hsp_bit-score>45.0542</Hsp_bit-score> |
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704 <Hsp_score>105</Hsp_score> |
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705 <Hsp_evalue>4.04475e-07</Hsp_evalue> |
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706 <Hsp_query-from>30</Hsp_query-from> |
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707 <Hsp_query-to>144</Hsp_query-to> |
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708 <Hsp_hit-from>1</Hsp_hit-from> |
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709 <Hsp_hit-to>111</Hsp_hit-to> |
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710 <Hsp_query-frame>0</Hsp_query-frame> |
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711 <Hsp_hit-frame>0</Hsp_hit-frame> |
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712 <Hsp_identity>42</Hsp_identity> |
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713 <Hsp_positive>60</Hsp_positive> |
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714 <Hsp_gaps>8</Hsp_gaps> |
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715 <Hsp_align-len>117</Hsp_align-len> |
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changeset
|
716 <Hsp_qseq>VVGNSKEEYMKEVWKDYDDKYK--VSNTGRVINKITKHELKPWIINSGYKQVTVTEGNILVHRLVAKLFIPNNNPNLNVVNHIDNNRLNNHVNNLEWVDYRGNTLHSAKQGRQNTYS</Hsp_qseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
717 <Hsp_hseq>MVENKINEIWKPIKKEYFNKYNFYVSNLGRV--KINDRLSKVHQDRDGYLTVRVNNKKHMVHRLVYEYF-GNDFIKSNHVHHIDGNKQNNCIDNLECI---SPSEHNKRHHKDNTFN</Hsp_hseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
718 <Hsp_midline>+V N E K + K+Y +KY VSN GRV KI K GY V V +VHRLV + F N+ N V+HID N+ NN ++NLE + + H+ + + NT++</Hsp_midline> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
719 </Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
720 </Hit_hsps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
721 </Hit> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
722 <Hit> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
723 <Hit_num>5</Hit_num> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
724 <Hit_id>gnl|BL_ORD_ID|472</Hit_id> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
725 <Hit_def>org_id=NC_005880.2_protein_id=YP_009041235.1 locus_tag=CPT_phageK_gp013 protein=putative HNH endonuclease</Hit_def> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
726 <Hit_accession>472</Hit_accession> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
727 <Hit_len>162</Hit_len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
728 <Hit_hsps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
729 <Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
730 <Hsp_num>1</Hsp_num> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
731 <Hsp_bit-score>45.0542</Hsp_bit-score> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
732 <Hsp_score>105</Hsp_score> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
733 <Hsp_evalue>4.04475e-07</Hsp_evalue> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
734 <Hsp_query-from>30</Hsp_query-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
735 <Hsp_query-to>144</Hsp_query-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
736 <Hsp_hit-from>1</Hsp_hit-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
737 <Hsp_hit-to>111</Hsp_hit-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
738 <Hsp_query-frame>0</Hsp_query-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
739 <Hsp_hit-frame>0</Hsp_hit-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
740 <Hsp_identity>42</Hsp_identity> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
741 <Hsp_positive>60</Hsp_positive> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
742 <Hsp_gaps>8</Hsp_gaps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
743 <Hsp_align-len>117</Hsp_align-len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
744 <Hsp_qseq>VVGNSKEEYMKEVWKDYDDKYK--VSNTGRVINKITKHELKPWIINSGYKQVTVTEGNILVHRLVAKLFIPNNNPNLNVVNHIDNNRLNNHVNNLEWVDYRGNTLHSAKQGRQNTYS</Hsp_qseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
745 <Hsp_hseq>MVENKINEIWKPIKKEYFNKYNFYVSNLGRV--KINDRLSKVHQDRDGYLTVRVNNKKHMVHRLVYEYF-GNDFIKSNHVHHIDGNKQNNCIDNLECI---SPSEHNKRHHKDNTFN</Hsp_hseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
746 <Hsp_midline>+V N E K + K+Y +KY VSN GRV KI K GY V V +VHRLV + F N+ N V+HID N+ NN ++NLE + + H+ + + NT++</Hsp_midline> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
747 </Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
748 </Hit_hsps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
749 </Hit> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
750 <Hit> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
751 <Hit_num>6</Hit_num> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
752 <Hit_id>gnl|BL_ORD_ID|2116</Hit_id> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
753 <Hit_def>org_id=NC_000866.4_protein_id=NP_049674.1 gene=mobB locus_tag=T4p060 protein=MobB homing endonuclease</Hit_def> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
754 <Hit_accession>2116</Hit_accession> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
755 <Hit_len>264</Hit_len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
756 <Hit_hsps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
757 <Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
758 <Hsp_num>1</Hsp_num> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
759 <Hsp_bit-score>40.0466</Hsp_bit-score> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
760 <Hsp_score>92</Hsp_score> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
761 <Hsp_evalue>4.15448e-05</Hsp_evalue> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
762 <Hsp_query-from>27</Hsp_query-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
763 <Hsp_query-to>207</Hsp_query-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
764 <Hsp_hit-from>95</Hsp_hit-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
765 <Hsp_hit-to>263</Hsp_hit-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
766 <Hsp_query-frame>0</Hsp_query-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
767 <Hsp_hit-frame>0</Hsp_hit-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
768 <Hsp_identity>45</Hsp_identity> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
769 <Hsp_positive>76</Hsp_positive> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
770 <Hsp_gaps>22</Hsp_gaps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
771 <Hsp_align-len>186</Hsp_align-len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
772 <Hsp_qseq>IISVVGNSKEEYMKEVWKDYDDKYKVSNTGRVINK-ITKHELKPWIINSGYKQVTVTEGNILVHRLVAKLFIPNNNPNLNVVNHIDNNRLNNHVNNLEWVDYR----GNTLHSAKQGRQNTYSAREQLKKVSNKAVYQKDMEGNIVKVWDSPTQAQRETGGYFSPSKISQVISGRHKSHKGYKWEY</Hsp_qseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
773 <Hsp_hseq>IKTAVSSSISESMKEFWKDDDNKKYMSNARRNAGKPIYQYDLNGNFIRK-YRCITDAAEDM------------SYSCSTSIKQCVDGKR--KTAGGFQWKYYYSDNIGKPSRMSNATKQKMSKSKRGITQKRNVPVFQYDTTGKLLRVFPRIKDAAVSVKGCM--SNIKKCISGKSKIAYGYVWAY</Hsp_hseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
774 <Hsp_midline>I + V +S E MKE WKD D+K +SN R K I +++L I Y+ +T ++ + + + ++ +D R +W Y G + +Q ++ + + N V+Q D G +++V+ A G S I + ISG+ K GY W Y</Hsp_midline> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
775 </Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
776 </Hit_hsps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
777 </Hit> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
778 <Hit> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
779 <Hit_num>7</Hit_num> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
780 <Hit_id>gnl|BL_ORD_ID|1848</Hit_id> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
781 <Hit_def>org_id=NC_005282.1_protein_id=NP_944955.1 locus_tag=Felix01p176 protein=Putative HNH endonuclease</Hit_def> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
782 <Hit_accession>1848</Hit_accession> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
783 <Hit_len>167</Hit_len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
784 <Hit_hsps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
785 <Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
786 <Hsp_num>1</Hsp_num> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
787 <Hsp_bit-score>36.965</Hsp_bit-score> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
788 <Hsp_score>84</Hsp_score> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
789 <Hsp_evalue>0.000268326</Hsp_evalue> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
790 <Hsp_query-from>75</Hsp_query-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
791 <Hsp_query-to>137</Hsp_query-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
792 <Hsp_hit-from>47</Hsp_hit-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
793 <Hsp_hit-to>107</Hsp_hit-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
794 <Hsp_query-frame>0</Hsp_query-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
795 <Hsp_hit-frame>0</Hsp_hit-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
796 <Hsp_identity>22</Hsp_identity> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
797 <Hsp_positive>33</Hsp_positive> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
798 <Hsp_gaps>2</Hsp_gaps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
799 <Hsp_align-len>63</Hsp_align-len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
800 <Hsp_qseq>GYKQVTVTEGNILVHRLVAKLFIPNNNPNLNVVNHIDNNRLNNHVNNLEWVDYRGNTLHSAKQ</Hsp_qseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
801 <Hsp_hseq>GYKVLKFKDVVIKIHHLV--WWFEHGYKPTKMIDHIDGNRSNNHISNLRETDKYGNAQNRIKQ</Hsp_hseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
802 <Hsp_midline>GYK + + I +H LV + + +++HID NR NNH++NL D GN + KQ</Hsp_midline> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
803 </Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
804 </Hit_hsps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
805 </Hit> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
806 </Iteration_hits> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
807 <Iteration_stat> |
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|
808 <Statistics> |
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|
809 <Statistics_db-num>3263</Statistics_db-num> |
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|
810 <Statistics_db-len>679396</Statistics_db-len> |
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|
811 <Statistics_hsp-len>77</Statistics_hsp-len> |
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|
812 <Statistics_eff-space>83916420</Statistics_eff-space> |
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|
813 <Statistics_kappa>0.041</Statistics_kappa> |
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|
814 <Statistics_lambda>0.267</Statistics_lambda> |
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|
815 <Statistics_entropy>0.14</Statistics_entropy> |
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|
816 </Statistics> |
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|
817 </Iteration_stat> |
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|
818 </Iteration> |
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|
819 <Iteration> |
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|
820 <Iteration_iter-num>14</Iteration_iter-num> |
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|
821 <Iteration_query-ID>Query_14</Iteration_query-ID> |
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|
822 <Iteration_query-def>dd981233-d38a-4ef2-9b0d-1fa088b6b854 [Location=[8983:9703](+);Name=dd981233-d38a-4ef2-9b0d-1fa088b6b854]</Iteration_query-def> |
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823 <Iteration_query-len>239</Iteration_query-len> |
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824 <Iteration_hits> |
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|
825 <Hit> |
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|
826 <Hit_num>1</Hit_num> |
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827 <Hit_id>gnl|BL_ORD_ID|600</Hit_id> |
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|
828 <Hit_def>org_id=NC_005880.2_protein_id=YP_009041363.1 locus_tag=CPT_phageK_gp125 protein=putative DNA polymerase A</Hit_def> |
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829 <Hit_accession>600</Hit_accession> |
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|
830 <Hit_len>1072</Hit_len> |
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831 <Hit_hsps> |
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832 <Hsp> |
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|
833 <Hsp_num>1</Hsp_num> |
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|
834 <Hsp_bit-score>302.368</Hsp_bit-score> |
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|
835 <Hsp_score>773</Hsp_score> |
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836 <Hsp_evalue>3.33613e-97</Hsp_evalue> |
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|
837 <Hsp_query-from>2</Hsp_query-from> |
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|
838 <Hsp_query-to>235</Hsp_query-to> |
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839 <Hsp_hit-from>794</Hsp_hit-from> |
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|
840 <Hsp_hit-to>1027</Hsp_hit-to> |
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841 <Hsp_query-frame>0</Hsp_query-frame> |
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|
842 <Hsp_hit-frame>0</Hsp_hit-frame> |
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843 <Hsp_identity>137</Hsp_identity> |
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844 <Hsp_positive>184</Hsp_positive> |
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845 <Hsp_gaps>0</Hsp_gaps> |
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846 <Hsp_align-len>234</Hsp_align-len> |
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|
847 <Hsp_qseq>TKDKDMTNIFLHGGDLHKNTASLVYNKPEEEITTDERTKAKTVSFSLLYGDVPFSFASKNNMPVEEVEELFDNYYKNKPAVGQAIEDTHEFAQKHGYVETLHGFRRFLGNATSNDKQKRNQALRQSFNARIQGLGSWFTSMAITYIDDFIQTRNMKSKLIATVHDSIVVDTHPDEVKVMAKVVLHCMQNLPFDFLYIEYEGENIRYPIVADMEIGTSYGDLVEYDENHMNEFNS</Hsp_qseq> |
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|
848 <Hsp_hseq>TKDPDMLQSFLNGEDIHKATASIVYNKPVEEVTKEERQATKAVNFGLAFGESPFSFAGKNNMEVSEAEEIFEKYFQTKPSVKTSIDNVHEFVQQYGYVDTMHGHRRFIRSAQSTDKKIKNEGLRQSFNTIIQGSGSFLTNMSLTYLDDFIQSRNLKSKVIATVHDSILIDCPPEEAKIMAKVTIHIMENLPFDFLKAEIDGKEVQYPIEADMEIGLNYNDMVEYDEEEIDTFNS</Hsp_hseq> |
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849 <Hsp_midline>TKD DM FL+G D+HK TAS+VYNKP EE+T +ER K V+F L +G+ PFSFA KNNM V E EE+F+ Y++ KP+V +I++ HEF Q++GYV+T+HG RRF+ +A S DK+ +N+ LRQSFN IQG GS+ T+M++TY+DDFIQ+RN+KSK+IATVHDSI++D P+E K+MAKV +H M+NLPFDFL E +G+ ++YPI ADMEIG +Y D+VEYDE ++ FNS</Hsp_midline> |
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850 </Hsp> |
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851 </Hit_hsps> |
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852 </Hit> |
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853 <Hit> |
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|
854 <Hit_num>2</Hit_num> |
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|
855 <Hit_id>gnl|BL_ORD_ID|1041</Hit_id> |
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|
856 <Hit_def>org_id=NC_011421.1_protein_id=YP_002300417.1 gene=31 locus_tag=SPO1_146 protein=gp31</Hit_def> |
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|
857 <Hit_accession>1041</Hit_accession> |
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|
858 <Hit_len>925</Hit_len> |
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859 <Hit_hsps> |
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860 <Hsp> |
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|
861 <Hsp_num>1</Hsp_num> |
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862 <Hsp_bit-score>141.354</Hsp_bit-score> |
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863 <Hsp_score>355</Hsp_score> |
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864 <Hsp_evalue>1.26054e-39</Hsp_evalue> |
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865 <Hsp_query-from>1</Hsp_query-from> |
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866 <Hsp_query-to>224</Hsp_query-to> |
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867 <Hsp_hit-from>648</Hsp_hit-from> |
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868 <Hsp_hit-to>873</Hsp_hit-to> |
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869 <Hsp_query-frame>0</Hsp_query-frame> |
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870 <Hsp_hit-frame>0</Hsp_hit-frame> |
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871 <Hsp_identity>82</Hsp_identity> |
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872 <Hsp_positive>129</Hsp_positive> |
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873 <Hsp_gaps>8</Hsp_gaps> |
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874 <Hsp_align-len>229</Hsp_align-len> |
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875 <Hsp_qseq>MTKDKDMTNIFLHGGDLHKNTASLVYNKPEEEITTDERTKAKTVSFSLLYGDVPFSF-----ASKNNMPVEEVEELFDNYYKNKPAVGQAIEDTHEFAQKHGYVETLHGFRRFLGNATSNDKQKRNQALRQSFNARIQGLGSWFTSMAITYIDDFIQTRNMKSKLIATVHDSIVVDTHPDEVKVMAKVVLHCMQNLPFDFLYIEYEGENIRYPIVADMEIGTSYGDLVE</Hsp_qseq> |
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876 <Hsp_hseq>ITQDPTLIDLYRSGADLHKAVASDAFGVAIEEVSKDQRTASKKIQFGIVYQESARGLSEDLRAEGITMSEDECEIFIKKYFKRFPKVSKWIRDTKKHVKRHKYVKTLTGRTRNLPDIDSIDQSKANEAERQAVNTPIQGTGSDCTLMSLILINQWLRESGLRSRICITVHDSIVLDCPKDEVLEVAKKVKHIMENLGEYNEFYKFLGD---VPILSEMEIGRNYGDAFE</Hsp_hseq> |
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877 <Hsp_midline>+T+D + +++ G DLHK AS + EE++ D+RT +K + F ++Y + A M +E E Y+K P V + I DT + ++H YV+TL G R L + S D+ K N+A RQ+ N IQG GS T M++ I+ +++ ++S++ TVHDSIV+D DEV +AK V H M+NL + ++ G+ PI+++MEIG +YGD E</Hsp_midline> |
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|
878 </Hsp> |
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879 </Hit_hsps> |
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880 </Hit> |
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881 <Hit> |
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|
882 <Hit_num>3</Hit_num> |
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883 <Hit_id>gnl|BL_ORD_ID|1525</Hit_id> |
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884 <Hit_def>org_id=NC_005859.1_protein_id=YP_006950.1 gene=pol locus_tag=T5.122 protein=DNA polymerase</Hit_def> |
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885 <Hit_accession>1525</Hit_accession> |
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886 <Hit_len>855</Hit_len> |
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887 <Hit_hsps> |
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888 <Hsp> |
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889 <Hsp_num>1</Hsp_num> |
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890 <Hsp_bit-score>64.6994</Hsp_bit-score> |
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891 <Hsp_score>156</Hsp_score> |
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892 <Hsp_evalue>3.66868e-13</Hsp_evalue> |
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893 <Hsp_query-from>1</Hsp_query-from> |
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894 <Hsp_query-to>189</Hsp_query-to> |
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895 <Hsp_hit-from>539</Hsp_hit-from> |
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896 <Hsp_hit-to>757</Hsp_hit-to> |
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897 <Hsp_query-frame>0</Hsp_query-frame> |
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|
898 <Hsp_hit-frame>0</Hsp_hit-frame> |
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|
899 <Hsp_identity>51</Hsp_identity> |
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parents:
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|
900 <Hsp_positive>99</Hsp_positive> |
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|
901 <Hsp_gaps>30</Hsp_gaps> |
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|
902 <Hsp_align-len>219</Hsp_align-len> |
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parents:
diff
changeset
|
903 <Hsp_qseq>MTKDKDMTNIFLHG-------GDLHKNTASLVYN---KPEE--EITTDERTKAKTVSFSLLYGDVP-----------FSFASKNNMP-----VEEVEELFDNYYKNKPAVGQAIEDTHEFAQKHGYVETLHGFRRFLGNATSNDKQKRNQALRQSFNARIQGLGSWFTSMAITYIDDFIQTRNMKS--KLIATVHDSIVVDTHPDEVKVMAKVVLHCMQ</Hsp_qseq> |
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parents:
diff
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|
904 <Hsp_hseq>LSGDRNMQQVFINMRNEPDKYPDFHSNIAHMVFKLQCEPRDVKKLFPALRQAAKAITFGILYGSGPAKVAHSVNEALLEQAAKTGEPFVECTVADAKEYIETYFGQFPQLKRWIDKCHDQIKNHGFIYSHFGRKRRLHNIHSEDRGVQGEEIRSGFNAIIQSASSDSLLLGAVDADNEIISLGLEQEMKIVMLVHDSVVAIVREDLIDQYNEILIRNIQ</Hsp_hseq> |
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|
905 <Hsp_midline>++ D++M +F++ D H N A +V+ +P + ++ R AK ++F +LYG P A+K P V + +E + Y+ P + + I+ H+ + HG++ + G +R L N S D+ + + +R FNA IQ S + D+ I + ++ K++ VHDS+V D + ++++ +Q</Hsp_midline> |
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parents:
diff
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|
906 </Hsp> |
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parents:
diff
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|
907 </Hit_hsps> |
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|
908 </Hit> |
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parents:
diff
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|
909 </Iteration_hits> |
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|
910 <Iteration_stat> |
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|
911 <Statistics> |
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|
912 <Statistics_db-num>3263</Statistics_db-num> |
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|
913 <Statistics_db-len>679396</Statistics_db-len> |
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|
914 <Statistics_hsp-len>75</Statistics_hsp-len> |
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|
915 <Statistics_eff-space>71286044</Statistics_eff-space> |
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|
916 <Statistics_kappa>0.041</Statistics_kappa> |
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parents:
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|
917 <Statistics_lambda>0.267</Statistics_lambda> |
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|
918 <Statistics_entropy>0.14</Statistics_entropy> |
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|
919 </Statistics> |
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parents:
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|
920 </Iteration_stat> |
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|
921 </Iteration> |
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parents:
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|
922 <Iteration> |
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parents:
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|
923 <Iteration_iter-num>15</Iteration_iter-num> |
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|
924 <Iteration_query-ID>Query_15</Iteration_query-ID> |
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|
925 <Iteration_query-def>00c94036-c498-4190-87ad-785fab1f7526 [Location=[9829:10129](-);Name=00c94036-c498-4190-87ad-785fab1f7526]</Iteration_query-def> |
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|
926 <Iteration_query-len>99</Iteration_query-len> |
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|
927 <Iteration_hits> |
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|
928 <Hit> |
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|
929 <Hit_num>1</Hit_num> |
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|
930 <Hit_id>gnl|BL_ORD_ID|2281</Hit_id> |
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|
931 <Hit_def>org_id=NC_000866.4_protein_id=NP_049836.2 gene=pseT.2 locus_tag=T4p225 protein=PseT.2 conserved hypothetical protein</Hit_def> |
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|
932 <Hit_accession>2281</Hit_accession> |
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|
933 <Hit_len>99</Hit_len> |
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|
934 <Hit_hsps> |
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|
935 <Hsp> |
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|
936 <Hsp_num>1</Hsp_num> |
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|
937 <Hsp_bit-score>200.675</Hsp_bit-score> |
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|
938 <Hsp_score>509</Hsp_score> |
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|
939 <Hsp_evalue>3.68061e-70</Hsp_evalue> |
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|
940 <Hsp_query-from>1</Hsp_query-from> |
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|
941 <Hsp_query-to>99</Hsp_query-to> |
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|
942 <Hsp_hit-from>1</Hsp_hit-from> |
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|
943 <Hsp_hit-to>99</Hsp_hit-to> |
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|
944 <Hsp_query-frame>0</Hsp_query-frame> |
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|
945 <Hsp_hit-frame>0</Hsp_hit-frame> |
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|
946 <Hsp_identity>97</Hsp_identity> |
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|
947 <Hsp_positive>97</Hsp_positive> |
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|
948 <Hsp_gaps>0</Hsp_gaps> |
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|
949 <Hsp_align-len>99</Hsp_align-len> |
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|
950 <Hsp_qseq>MIKLSAVILSIGLLVGCSTKPLEVKKETVHPNWPVQIKSYDEAKLSWQVKVIDGKAWVGMPFEDSQEFRIWLNDVKRYVHDQKTMNSYYRQELKEDKCK</Hsp_qseq> |
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|
951 <Hsp_hseq>MIKLSAVILSIGLLVGCSTKPLEVKKETVHPNWPVQIKSYDEAKLSWQVKVIDGKAWVGMPFEDSQEFRIWLNDVKRYVHDQKTMXCYYRQELKEDKCK</Hsp_hseq> |
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parents:
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|
952 <Hsp_midline>MIKLSAVILSIGLLVGCSTKPLEVKKETVHPNWPVQIKSYDEAKLSWQVKVIDGKAWVGMPFEDSQEFRIWLNDVKRYVHDQKTM YYRQELKEDKCK</Hsp_midline> |
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|
953 </Hsp> |
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parents:
diff
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|
954 </Hit_hsps> |
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parents:
diff
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|
955 </Hit> |
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parents:
diff
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|
956 </Iteration_hits> |
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parents:
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|
957 <Iteration_stat> |
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parents:
diff
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|
958 <Statistics> |
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parents:
diff
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|
959 <Statistics_db-num>3263</Statistics_db-num> |
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parents:
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|
960 <Statistics_db-len>679396</Statistics_db-len> |
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|
961 <Statistics_hsp-len>63</Statistics_hsp-len> |
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parents:
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|
962 <Statistics_eff-space>17057772</Statistics_eff-space> |
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parents:
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|
963 <Statistics_kappa>0.041</Statistics_kappa> |
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parents:
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|
964 <Statistics_lambda>0.267</Statistics_lambda> |
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parents:
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|
965 <Statistics_entropy>0.14</Statistics_entropy> |
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parents:
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|
966 </Statistics> |
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parents:
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|
967 </Iteration_stat> |
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|
968 </Iteration> |
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parents:
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|
969 <Iteration> |
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parents:
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|
970 <Iteration_iter-num>16</Iteration_iter-num> |
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|
971 <Iteration_query-ID>Query_16</Iteration_query-ID> |
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parents:
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|
972 <Iteration_query-def>9c822be3-2364-455e-b648-9d63d9bd7ef3 [Location=[10125:10479](-);Name=9c822be3-2364-455e-b648-9d63d9bd7ef3]</Iteration_query-def> |
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|
973 <Iteration_query-len>117</Iteration_query-len> |
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parents:
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|
974 <Iteration_hits> |
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|
975 <Hit> |
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|
976 <Hit_num>1</Hit_num> |
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|
977 <Hit_id>gnl|BL_ORD_ID|2282</Hit_id> |
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|
978 <Hit_def>org_id=NC_000866.4_protein_id=NP_049837.1 gene=pseT.3 locus_tag=T4p226 protein=PseT.3 conserved hypothetical predicted membrane protein</Hit_def> |
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|
979 <Hit_accession>2282</Hit_accession> |
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|
980 <Hit_len>117</Hit_len> |
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|
981 <Hit_hsps> |
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|
982 <Hsp> |
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|
983 <Hsp_num>1</Hsp_num> |
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|
984 <Hsp_bit-score>234.572</Hsp_bit-score> |
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|
985 <Hsp_score>597</Hsp_score> |
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|
986 <Hsp_evalue>5.13514e-83</Hsp_evalue> |
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|
987 <Hsp_query-from>1</Hsp_query-from> |
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|
988 <Hsp_query-to>117</Hsp_query-to> |
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|
989 <Hsp_hit-from>1</Hsp_hit-from> |
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|
990 <Hsp_hit-to>117</Hsp_hit-to> |
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991 <Hsp_query-frame>0</Hsp_query-frame> |
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992 <Hsp_hit-frame>0</Hsp_hit-frame> |
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993 <Hsp_identity>117</Hsp_identity> |
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994 <Hsp_positive>117</Hsp_positive> |
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995 <Hsp_gaps>0</Hsp_gaps> |
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996 <Hsp_align-len>117</Hsp_align-len> |
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997 <Hsp_qseq>MHVSNFTAGLLLLVIAFGGTSIILKHKVERLETSVTEITKTANENALALNNLRIQYNYIDAMNNKNREAIAAIERENEKLRKDAKKADVVAHKPGLVEKQINNSFNKFAEDIQDLSK</Hsp_qseq> |
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998 <Hsp_hseq>MHVSNFTAGLLLLVIAFGGTSIILKHKVERLETSVTEITKTANENALALNNLRIQYNYIDAMNNKNREAIAAIERENEKLRKDAKKADVVAHKPGLVEKQINNSFNKFAEDIQDLSK</Hsp_hseq> |
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999 <Hsp_midline>MHVSNFTAGLLLLVIAFGGTSIILKHKVERLETSVTEITKTANENALALNNLRIQYNYIDAMNNKNREAIAAIERENEKLRKDAKKADVVAHKPGLVEKQINNSFNKFAEDIQDLSK</Hsp_midline> |
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1000 </Hsp> |
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1001 </Hit_hsps> |
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1002 </Hit> |
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1003 </Iteration_hits> |
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1004 <Iteration_stat> |
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1005 <Statistics> |
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1006 <Statistics_db-num>3263</Statistics_db-num> |
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1007 <Statistics_db-len>679396</Statistics_db-len> |
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1008 <Statistics_hsp-len>67</Statistics_hsp-len> |
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1009 <Statistics_eff-space>23038750</Statistics_eff-space> |
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1010 <Statistics_kappa>0.041</Statistics_kappa> |
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1011 <Statistics_lambda>0.267</Statistics_lambda> |
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1012 <Statistics_entropy>0.14</Statistics_entropy> |
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1013 </Statistics> |
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1014 </Iteration_stat> |
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1015 </Iteration> |
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1016 <Iteration> |
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1017 <Iteration_iter-num>17</Iteration_iter-num> |
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1018 <Iteration_query-ID>Query_17</Iteration_query-ID> |
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1019 <Iteration_query-def>bd67755a-ef64-4bc3-92e4-a952a94e69a5 [Location=[11171:11537](+);Name=bd67755a-ef64-4bc3-92e4-a952a94e69a5]</Iteration_query-def> |
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1020 <Iteration_query-len>121</Iteration_query-len> |
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1021 <Iteration_hits> |
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1022 </Iteration_hits> |
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1023 <Iteration_stat> |
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1024 <Statistics> |
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1025 <Statistics_db-num>3263</Statistics_db-num> |
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1026 <Statistics_db-len>679396</Statistics_db-len> |
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1027 <Statistics_hsp-len>68</Statistics_hsp-len> |
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1028 <Statistics_eff-space>24248136</Statistics_eff-space> |
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1029 <Statistics_kappa>0.041</Statistics_kappa> |
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1030 <Statistics_lambda>0.267</Statistics_lambda> |
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1031 <Statistics_entropy>0.14</Statistics_entropy> |
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1032 </Statistics> |
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1033 </Iteration_stat> |
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1034 <Iteration_message>No hits found</Iteration_message> |
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1035 </Iteration> |
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1036 <Iteration> |
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1037 <Iteration_iter-num>18</Iteration_iter-num> |
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1038 <Iteration_query-ID>Query_18</Iteration_query-ID> |
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1039 <Iteration_query-def>00aaa468-0676-4649-bd1f-29e5cf9ff6a0 [Location=[11533:12067](+);Name=00aaa468-0676-4649-bd1f-29e5cf9ff6a0]</Iteration_query-def> |
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1040 <Iteration_query-len>177</Iteration_query-len> |
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1041 <Iteration_hits> |
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1042 <Hit> |
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1043 <Hit_num>1</Hit_num> |
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1044 <Hit_id>gnl|BL_ORD_ID|3168</Hit_id> |
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1045 <Hit_def>org_id=NC_001416.1_protein_id=NP_040646.1 gene=Rz locus_tag=lambdap76 protein=cell lysis protein</Hit_def> |
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1046 <Hit_accession>3168</Hit_accession> |
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1047 <Hit_len>153</Hit_len> |
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1048 <Hit_hsps> |
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1049 <Hsp> |
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1050 <Hsp_num>1</Hsp_num> |
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1051 <Hsp_bit-score>308.916</Hsp_bit-score> |
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1052 <Hsp_score>790</Hsp_score> |
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1053 <Hsp_evalue>7.67868e-111</Hsp_evalue> |
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1054 <Hsp_query-from>25</Hsp_query-from> |
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1055 <Hsp_query-to>177</Hsp_query-to> |
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1056 <Hsp_hit-from>1</Hsp_hit-from> |
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1057 <Hsp_hit-to>153</Hsp_hit-to> |
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1058 <Hsp_query-frame>0</Hsp_query-frame> |
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1059 <Hsp_hit-frame>0</Hsp_hit-frame> |
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1060 <Hsp_identity>153</Hsp_identity> |
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1061 <Hsp_positive>153</Hsp_positive> |
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1062 <Hsp_gaps>0</Hsp_gaps> |
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1063 <Hsp_align-len>153</Hsp_align-len> |
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1064 <Hsp_qseq>MSRVTAIISALVICIIVCLSWAVNHYRDNAITYKAQRDKNARELKLANAAITDMQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR</Hsp_qseq> |
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1065 <Hsp_hseq>MSRVTAIISALVICIIVCLSWAVNHYRDNAITYKAQRDKNARELKLANAAITDMQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR</Hsp_hseq> |
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1066 <Hsp_midline>MSRVTAIISALVICIIVCLSWAVNHYRDNAITYKAQRDKNARELKLANAAITDMQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR</Hsp_midline> |
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1067 </Hsp> |
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1068 </Hit_hsps> |
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1069 </Hit> |
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1070 <Hit> |
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1071 <Hit_num>2</Hit_num> |
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1072 <Hit_id>gnl|BL_ORD_ID|2783</Hit_id> |
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1073 <Hit_def>org_id=NC_002167.1_protein_id=NP_037754.1 gene=Rz locus_tag=HK97p59 protein=Rz lysis protein</Hit_def> |
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1074 <Hit_accession>2783</Hit_accession> |
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1075 <Hit_len>145</Hit_len> |
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1076 <Hit_hsps> |
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1077 <Hsp> |
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1078 <Hsp_num>1</Hsp_num> |
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1079 <Hsp_bit-score>165.236</Hsp_bit-score> |
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1080 <Hsp_score>417</Hsp_score> |
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1081 <Hsp_evalue>4.37175e-54</Hsp_evalue> |
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1082 <Hsp_query-from>25</Hsp_query-from> |
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1083 <Hsp_query-to>176</Hsp_query-to> |
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1084 <Hsp_hit-from>1</Hsp_hit-from> |
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1085 <Hsp_hit-to>143</Hsp_hit-to> |
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1086 <Hsp_query-frame>0</Hsp_query-frame> |
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1087 <Hsp_hit-frame>0</Hsp_hit-frame> |
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1088 <Hsp_identity>89</Hsp_identity> |
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1089 <Hsp_positive>105</Hsp_positive> |
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1090 <Hsp_gaps>9</Hsp_gaps> |
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1091 <Hsp_align-len>152</Hsp_align-len> |
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1092 <Hsp_qseq>MSRVTAIISALVICIIVCLSWAVNHYRDNAITYKAQRDKNARELKLANAAITDMQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQC</Hsp_qseq> |
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1093 <Hsp_hseq>MSRVTAIISALVICIIVCLSWAVNHYRDNAIAYKEQRDK-------AASIIADMQKRQRDVAELDARYTKELADANATIESLRADVSAGRKRLQVSATC--AKSTTGASSMGDGESPRLTADAELNYYRLRSGIDRITAQVNYLQEYIRTQC</Hsp_hseq> |
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1094 <Hsp_midline>MSRVTAIISALVICIIVCLSWAVNHYRDNAI YK QRDK A + I DMQ RQRDVA LDA+YTKELADA A ++LR DV+AGR+RL + A C + T AS + + SPRL AE +Y+ LR + + Q+ Q+YI QC</Hsp_midline> |
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1095 </Hsp> |
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|
1096 </Hit_hsps> |
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1097 </Hit> |
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1098 <Hit> |
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1099 <Hit_num>3</Hit_num> |
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1100 <Hit_id>gnl|BL_ORD_ID|1398</Hit_id> |
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1101 <Hit_def>org_id=NC_002371.2_protein_id=NP_059623.2 gene=15 locus_tag=P22gp67 protein=hypothetical protein</Hit_def> |
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1102 <Hit_accession>1398</Hit_accession> |
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1103 <Hit_len>145</Hit_len> |
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1104 <Hit_hsps> |
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1105 <Hsp> |
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1106 <Hsp_num>1</Hsp_num> |
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1107 <Hsp_bit-score>140.584</Hsp_bit-score> |
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1108 <Hsp_score>353</Hsp_score> |
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1109 <Hsp_evalue>1.8341e-44</Hsp_evalue> |
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1110 <Hsp_query-from>25</Hsp_query-from> |
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1111 <Hsp_query-to>176</Hsp_query-to> |
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1112 <Hsp_hit-from>1</Hsp_hit-from> |
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1113 <Hsp_hit-to>143</Hsp_hit-to> |
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1114 <Hsp_query-frame>0</Hsp_query-frame> |
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1115 <Hsp_hit-frame>0</Hsp_hit-frame> |
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1116 <Hsp_identity>85</Hsp_identity> |
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1117 <Hsp_positive>105</Hsp_positive> |
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1118 <Hsp_gaps>9</Hsp_gaps> |
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1119 <Hsp_align-len>152</Hsp_align-len> |
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1120 <Hsp_qseq>MSRVTAIISALVICIIVCLSWAVNHYRDNAITYKAQRDKNARELKLANAAITDMQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQC</Hsp_qseq> |
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|
1121 <Hsp_hseq>MSRIKAIIASVIICIIVCLSWAVNHYRDNAITYKEQRDK-------ATSIIADMQKRQRDVAELDARYTKELADANATIETLRADVSAGRKRLQVSATCP--KSTTGASGMGDGESPRLTADAELNYYRLRSGIDRITAQVNYLQEYIRSQC</Hsp_hseq> |
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|
1122 <Hsp_midline>MSR+ AII++++ICIIVCLSWAVNHYRDNAITYK QRDK A + I DMQ RQRDVA LDA+YTKELADA A + LR DV+AGR+RL + A C + T ASG+ + SPRL AE +Y+ LR + + Q+ Q+YI QC</Hsp_midline> |
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1123 </Hsp> |
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1124 </Hit_hsps> |
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1125 </Hit> |
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1126 </Iteration_hits> |
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1127 <Iteration_stat> |
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1128 <Statistics> |
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1129 <Statistics_db-num>3263</Statistics_db-num> |
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1130 <Statistics_db-len>679396</Statistics_db-len> |
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1131 <Statistics_hsp-len>72</Statistics_hsp-len> |
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1132 <Statistics_eff-space>46668300</Statistics_eff-space> |
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|
1133 <Statistics_kappa>0.041</Statistics_kappa> |
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|
1134 <Statistics_lambda>0.267</Statistics_lambda> |
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|
1135 <Statistics_entropy>0.14</Statistics_entropy> |
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|
1136 </Statistics> |
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|
1137 </Iteration_stat> |
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1138 </Iteration> |
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1139 <Iteration> |
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1140 <Iteration_iter-num>19</Iteration_iter-num> |
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1141 <Iteration_query-ID>Query_19</Iteration_query-ID> |
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|
1142 <Iteration_query-def>8685008f-1507-494f-b3c5-4106cbc540c2-CDS [Location=[12237:12675](+);Name=8685008f-1507-494f-b3c5-4106cbc540c2-CDS]</Iteration_query-def> |
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1143 <Iteration_query-len>145</Iteration_query-len> |
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|
1144 <Iteration_hits> |
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1145 <Hit> |
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1146 <Hit_num>1</Hit_num> |
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|
1147 <Hit_id>gnl|BL_ORD_ID|2282</Hit_id> |
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1148 <Hit_def>org_id=NC_000866.4_protein_id=NP_049837.1 gene=pseT.3 locus_tag=T4p226 protein=PseT.3 conserved hypothetical predicted membrane protein</Hit_def> |
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1149 <Hit_accession>2282</Hit_accession> |
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1150 <Hit_len>117</Hit_len> |
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1151 <Hit_hsps> |
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1152 <Hsp> |
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|
1153 <Hsp_num>1</Hsp_num> |
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1154 <Hsp_bit-score>236.113</Hsp_bit-score> |
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1155 <Hsp_score>601</Hsp_score> |
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|
1156 <Hsp_evalue>4.4601e-83</Hsp_evalue> |
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1157 <Hsp_query-from>29</Hsp_query-from> |
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1158 <Hsp_query-to>145</Hsp_query-to> |
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1159 <Hsp_hit-from>1</Hsp_hit-from> |
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1160 <Hsp_hit-to>117</Hsp_hit-to> |
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1161 <Hsp_query-frame>0</Hsp_query-frame> |
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1162 <Hsp_hit-frame>0</Hsp_hit-frame> |
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1163 <Hsp_identity>117</Hsp_identity> |
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1164 <Hsp_positive>117</Hsp_positive> |
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1165 <Hsp_gaps>0</Hsp_gaps> |
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1166 <Hsp_align-len>117</Hsp_align-len> |
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1167 <Hsp_qseq>MHVSNFTAGLLLLVIAFGGTSIILKHKVERLETSVTEITKTANENALALNNLRIQYNYIDAMNNKNREAIAAIERENEKLRKDAKKADVVAHKPGLVEKQINNSFNKFAEDIQDLSK</Hsp_qseq> |
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1168 <Hsp_hseq>MHVSNFTAGLLLLVIAFGGTSIILKHKVERLETSVTEITKTANENALALNNLRIQYNYIDAMNNKNREAIAAIERENEKLRKDAKKADVVAHKPGLVEKQINNSFNKFAEDIQDLSK</Hsp_hseq> |
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1169 <Hsp_midline>MHVSNFTAGLLLLVIAFGGTSIILKHKVERLETSVTEITKTANENALALNNLRIQYNYIDAMNNKNREAIAAIERENEKLRKDAKKADVVAHKPGLVEKQINNSFNKFAEDIQDLSK</Hsp_midline> |
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1170 </Hsp> |
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1171 </Hit_hsps> |
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1172 </Hit> |
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1173 </Iteration_hits> |
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1174 <Iteration_stat> |
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1175 <Statistics> |
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1176 <Statistics_db-num>3263</Statistics_db-num> |
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1177 <Statistics_db-len>679396</Statistics_db-len> |
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1178 <Statistics_hsp-len>70</Statistics_hsp-len> |
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1179 <Statistics_eff-space>33823950</Statistics_eff-space> |
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1180 <Statistics_kappa>0.041</Statistics_kappa> |
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1181 <Statistics_lambda>0.267</Statistics_lambda> |
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1182 <Statistics_entropy>0.14</Statistics_entropy> |
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1183 </Statistics> |
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1184 </Iteration_stat> |
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1185 </Iteration> |
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1186 <Iteration> |
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1187 <Iteration_iter-num>20</Iteration_iter-num> |
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1188 <Iteration_query-ID>Query_20</Iteration_query-ID> |
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1189 <Iteration_query-def>bf5107cd-9514-4fb0-89a1-3a37782ae2b9 [Location=[12774:13128](+);Name=bf5107cd-9514-4fb0-89a1-3a37782ae2b9]</Iteration_query-def> |
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1190 <Iteration_query-len>117</Iteration_query-len> |
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1191 <Iteration_hits> |
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1192 <Hit> |
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1193 <Hit_num>1</Hit_num> |
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1194 <Hit_id>gnl|BL_ORD_ID|2282</Hit_id> |
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1195 <Hit_def>org_id=NC_000866.4_protein_id=NP_049837.1 gene=pseT.3 locus_tag=T4p226 protein=PseT.3 conserved hypothetical predicted membrane protein</Hit_def> |
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1196 <Hit_accession>2282</Hit_accession> |
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1197 <Hit_len>117</Hit_len> |
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1198 <Hit_hsps> |
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1199 <Hsp> |
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1200 <Hsp_num>1</Hsp_num> |
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1201 <Hsp_bit-score>234.572</Hsp_bit-score> |
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1202 <Hsp_score>597</Hsp_score> |
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1203 <Hsp_evalue>5.13514e-83</Hsp_evalue> |
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1204 <Hsp_query-from>1</Hsp_query-from> |
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1205 <Hsp_query-to>117</Hsp_query-to> |
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1206 <Hsp_hit-from>1</Hsp_hit-from> |
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1207 <Hsp_hit-to>117</Hsp_hit-to> |
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1208 <Hsp_query-frame>0</Hsp_query-frame> |
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1209 <Hsp_hit-frame>0</Hsp_hit-frame> |
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1210 <Hsp_identity>117</Hsp_identity> |
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1211 <Hsp_positive>117</Hsp_positive> |
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1212 <Hsp_gaps>0</Hsp_gaps> |
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1213 <Hsp_align-len>117</Hsp_align-len> |
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1214 <Hsp_qseq>MHVSNFTAGLLLLVIAFGGTSIILKHKVERLETSVTEITKTANENALALNNLRIQYNYIDAMNNKNREAIAAIERENEKLRKDAKKADVVAHKPGLVEKQINNSFNKFAEDIQDLSK</Hsp_qseq> |
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1215 <Hsp_hseq>MHVSNFTAGLLLLVIAFGGTSIILKHKVERLETSVTEITKTANENALALNNLRIQYNYIDAMNNKNREAIAAIERENEKLRKDAKKADVVAHKPGLVEKQINNSFNKFAEDIQDLSK</Hsp_hseq> |
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1216 <Hsp_midline>MHVSNFTAGLLLLVIAFGGTSIILKHKVERLETSVTEITKTANENALALNNLRIQYNYIDAMNNKNREAIAAIERENEKLRKDAKKADVVAHKPGLVEKQINNSFNKFAEDIQDLSK</Hsp_midline> |
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1217 </Hsp> |
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1218 </Hit_hsps> |
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1219 </Hit> |
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1220 </Iteration_hits> |
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1221 <Iteration_stat> |
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1222 <Statistics> |
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1223 <Statistics_db-num>3263</Statistics_db-num> |
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1224 <Statistics_db-len>679396</Statistics_db-len> |
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1225 <Statistics_hsp-len>67</Statistics_hsp-len> |
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1226 <Statistics_eff-space>23038750</Statistics_eff-space> |
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1227 <Statistics_kappa>0.041</Statistics_kappa> |
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1228 <Statistics_lambda>0.267</Statistics_lambda> |
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1229 <Statistics_entropy>0.14</Statistics_entropy> |
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1230 </Statistics> |
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1231 </Iteration_stat> |
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1232 </Iteration> |
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1233 <Iteration> |
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1234 <Iteration_iter-num>21</Iteration_iter-num> |
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1235 <Iteration_query-ID>Query_21</Iteration_query-ID> |
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1236 <Iteration_query-def>d4448467-da4f-4fa1-ba97-a0763a19d6f4 [Location=[13141:14296](+);Name=d4448467-da4f-4fa1-ba97-a0763a19d6f4]</Iteration_query-def> |
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1237 <Iteration_query-len>384</Iteration_query-len> |
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1238 <Iteration_hits> |
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1239 <Hit> |
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1240 <Hit_num>1</Hit_num> |
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1241 <Hit_id>gnl|BL_ORD_ID|594</Hit_id> |
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1242 <Hit_def>org_id=NC_005880.2_protein_id=YP_009041357.1 locus_tag=CPT_phageK_gp131 protein=putative ribonucleotide reductase large subunit</Hit_def> |
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1243 <Hit_accession>594</Hit_accession> |
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1244 <Hit_len>704</Hit_len> |
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1245 <Hit_hsps> |
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1246 <Hsp> |
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1247 <Hsp_num>1</Hsp_num> |
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1248 <Hsp_bit-score>574.318</Hsp_bit-score> |
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1249 <Hsp_score>1479</Hsp_score> |
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1250 <Hsp_evalue>0</Hsp_evalue> |
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1251 <Hsp_query-from>5</Hsp_query-from> |
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1252 <Hsp_query-to>383</Hsp_query-to> |
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1253 <Hsp_hit-from>4</Hsp_hit-from> |
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1254 <Hsp_hit-to>382</Hsp_hit-to> |
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1255 <Hsp_query-frame>0</Hsp_query-frame> |
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1256 <Hsp_hit-frame>0</Hsp_hit-frame> |
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1257 <Hsp_identity>270</Hsp_identity> |
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1258 <Hsp_positive>326</Hsp_positive> |
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1259 <Hsp_gaps>0</Hsp_gaps> |
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1260 <Hsp_align-len>379</Hsp_align-len> |
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1261 <Hsp_qseq>YGKWIELNNEITQLDEYGKNKLYKDKEALKEYEDYVKSNTREFDNEVDRVRVLTKEGSYDKVLDNVPDTIIKEMTELAYSFNFKFQSFMACQKFYESYAVVQYDKDDNVVFVEDYEQHNVRVALYLFQDDYAKARDMLIQLMEQTLQPATPTYLHSGKGNRGELSSCYIFVVDDTIESINFVANSVRNASKNSGGVSVEASRIRPKGATVQGNPNASQGVIPFAKNIEQGVSHFNQAGMRQGSAVVYLNVFHQDIEDFLSSKKINASEKVRLDTLSLGVTIPNKFMELVKDDRPLYTFDTSNLYEVTGKHLDEIDFNEEYENLIKNDNIKKKKLNARDLMTDIAKTQLESGYPYVFYIDNANDNHPLKGIGKVRASNLC</Hsp_qseq> |
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1262 <Hsp_hseq>YGKWIELNNEITQLDDNGKNKLYKDQEALDEYLKYIEDNTRKFNSEVERIRVLTKEGTYDKIFDNVPDTIIDEMTKLAYSFNFKFPSFMAGQKFYESYASKQYDENKKPIFVEDYEQHNVRVALYLFQNDYVKARELLVQLMEQTFQPSTPTYNNSGQANRGELSSCYLFVVDDSIESLNFVEDSVANASSNGGGVAIDLTRIRPKGAPVRNRPNSSKGVIAFAKAIEHKVSIYDQGGVRQGSGAVYLNIFHNDILDLLSSKKINASESVRLDKLSIGVTIPNKFMELVKEGKPFYTFDTYDINKMYGKYLDELNIDEWYDKLLNNDSIGKVKHDAREVMTDIAKTQLESGYPYVFYIDNANDNHPLKNLGKVKMSNLC</Hsp_hseq> |
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1263 <Hsp_midline>YGKWIELNNEITQLD+ GKNKLYKD+EAL EY Y++ NTR+F++EV+R+RVLTKEG+YDK+ DNVPDTII EMT+LAYSFNFKF SFMA QKFYESYA QYD++ +FVEDYEQHNVRVALYLFQ+DY KAR++L+QLMEQT QP+TPTY +SG+ NRGELSSCY+FVVDD+IES+NFV +SV NAS N GGV+++ +RIRPKGA V+ PN+S+GVI FAK IE VS ++Q G+RQGS VYLN+FH DI D LSSKKINASE VRLD LS+GVTIPNKFMELVK+ +P YTFDT ++ ++ GK+LDE++ +E Y+ L+ ND+I K K +AR++MTDIAKTQLESGYPYVFYIDNANDNHPLK +GKV+ SNLC</Hsp_midline> |
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|
1264 </Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1265 </Hit_hsps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1266 </Hit> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1267 <Hit> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1268 <Hit_num>2</Hit_num> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1269 <Hit_id>gnl|BL_ORD_ID|965</Hit_id> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1270 <Hit_def>org_id=NC_011421.1_protein_id=YP_002300341.1 gene=2.9 locus_tag=SPO1_69 protein=gp2.9</Hit_def> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1271 <Hit_accession>965</Hit_accession> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1272 <Hit_len>756</Hit_len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1273 <Hit_hsps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1274 <Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1275 <Hsp_num>1</Hsp_num> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1276 <Hsp_bit-score>127.487</Hsp_bit-score> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1277 <Hsp_score>319</Hsp_score> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1278 <Hsp_evalue>3.49423e-33</Hsp_evalue> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
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diff
changeset
|
1279 <Hsp_query-from>39</Hsp_query-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
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|
1280 <Hsp_query-to>383</Hsp_query-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
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diff
changeset
|
1281 <Hsp_hit-from>75</Hsp_hit-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1282 <Hsp_hit-to>441</Hsp_hit-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1283 <Hsp_query-frame>0</Hsp_query-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1284 <Hsp_hit-frame>0</Hsp_hit-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1285 <Hsp_identity>99</Hsp_identity> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1286 <Hsp_positive>171</Hsp_positive> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1287 <Hsp_gaps>38</Hsp_gaps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
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changeset
|
1288 <Hsp_align-len>375</Hsp_align-len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1289 <Hsp_qseq>YVKSNTREFDNEVDRVRVLTKEGSYDKVLDNVPDTIIKEMTE----LAYSFNFKFQSFM----ACQKFYESYAVVQYDKDDNVVFVEDYEQHNVRVALYLFQDDYAKARDMLIQ-----LMEQTLQPATPTYLHSGKGNRGELSSCYIFVVDDTIESINFVANSVRNASKNSGGVSVEASRIRPKGATVQGNPNASQGVIPFAKNIEQGVSHFNQAGMRQGSAVVYLNVFHQDIEDFLSSKKINASEKVRLDTLSLGVTIPNKFME---------LVKDDRPLYTFDTSNLYEVTGKHLDEI--------DFNEEYENLIKNDNIKKKKLNARDLMTDIAKTQLESGYPYVFYIDNANDNHPLKGIGKVRASNLC</Hsp_qseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1290 <Hsp_hseq>YKAGQLRGDQNPVQRIKELINNGQYGSFL-------LEKYTEDEINQAYSFIDTERDLLLDHSGIMMLNDRYLFKYKDSKGNMHPYELPQERWLTIALTLMQDEKPEKRMDLVKKAYWVLSNLYITVATPTMGNAGRPD-GQLSSCFIGTVEDSLDNIYDNNKDSAMVSKFGGGIGVYMGKIRSLNSYIRGMKGKSQGVIPWIKGLENTANSVDQLGQRKGAIAVYLDIWHKDVMEFLQIGTNNGDERRKARDVFPGLCVPDLFMEKLQPNPETGKVDPDAKWYLFDPHEVRMVMGYSLEDSYDEEEGAGTFRKRYMECVNSPLLSRTEVLVKDVAKAFMVSLMETGMPFMFFRDEVNRKNPNKHAGMIYCSNLC</Hsp_hseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1291 <Hsp_midline>Y R N V R++ L G Y L +++ TE AYSF + + + Y D N+ E ++ + +AL L QD+ + R L++ L + ATPT ++G+ + G+LSSC+I V+D++++I SK GG+ V +IR + ++G SQGVIP+ K +E + +Q G R+G+ VYL+++H+D+ +FL N E+ + + G+ +P+ FME V D Y FD + V G L++ F + Y + + + + ++ +D+ + +E+G P++F+ D N +P K G + SNLC</Hsp_midline> |
3e3d85f41503
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cpt
parents:
diff
changeset
|
1292 </Hsp> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1293 </Hit_hsps> |
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cpt
parents:
diff
changeset
|
1294 </Hit> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
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changeset
|
1295 <Hit> |
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cpt
parents:
diff
changeset
|
1296 <Hit_num>3</Hit_num> |
3e3d85f41503
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parents:
diff
changeset
|
1297 <Hit_id>gnl|BL_ORD_ID|2290</Hit_id> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1298 <Hit_def>org_id=NC_000866.4_protein_id=NP_049845.1 gene=nrdA locus_tag=T4p234 protein=ribonucleoside-diphosphate reductase subunit alpha</Hit_def> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff
changeset
|
1299 <Hit_accession>2290</Hit_accession> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff
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|
1300 <Hit_len>754</Hit_len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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|
1301 <Hit_hsps> |
3e3d85f41503
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parents:
diff
changeset
|
1302 <Hsp> |
3e3d85f41503
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parents:
diff
changeset
|
1303 <Hsp_num>1</Hsp_num> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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|
1304 <Hsp_bit-score>105.145</Hsp_bit-score> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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|
1305 <Hsp_score>261</Hsp_score> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1306 <Hsp_evalue>1.13152e-25</Hsp_evalue> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1307 <Hsp_query-from>126</Hsp_query-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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|
1308 <Hsp_query-to>383</Hsp_query-to> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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diff
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|
1309 <Hsp_hit-from>174</Hsp_hit-from> |
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|
1310 <Hsp_hit-to>437</Hsp_hit-to> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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diff
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|
1311 <Hsp_query-frame>0</Hsp_query-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
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diff
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|
1312 <Hsp_hit-frame>0</Hsp_hit-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff
changeset
|
1313 <Hsp_identity>73</Hsp_identity> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff
changeset
|
1314 <Hsp_positive>128</Hsp_positive> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff
changeset
|
1315 <Hsp_gaps>12</Hsp_gaps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff
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|
1316 <Hsp_align-len>267</Hsp_align-len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1317 <Hsp_qseq>VALYLFQDDYAKARDMLIQLME--QTLQPATPTYLHSG-KGNRGELSSCYIFVVDDTIESINFVANSVRNASKNSGGVSVEASRIRPKGATVQGNPNASQGVIPFAKNIEQGVSHFNQAGMRQGSAVVYLNVFHQDIEDFLSSKKINASEKVRLDTLSLGVTIPNKFMELVKDDRPLYTFDTSNLYEVTGKHL-----DEIDFNEEYENLIKNDNIKKKKLNARDLMTDIAKTQLESGYPYVFYIDNANDNHP-LKGIGKVRASNLC</Hsp_qseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff
changeset
|
1318 <Hsp_hseq>IGMALHQDEPVDRLKHVIRFYEAVSTRQISLPTPIMAGCRTPTRQFSSCVVIEAGDSLKSINKASASIVEYISKRAGIGINVGMIRAEGSKIGMGEVRHTGVIPFWKHFQTAVKSCSQGGIRGGAATAYYPIWHLEVENLLVLKNNKGVEENRIRHMDYGVQLNDLMMERFGKNDYITLFSP---HEMGGELYYSYFKDQDRFRELYEAAEKDPNIRKKRIKARELFELLMTERSGTARIYVQFIDNTNNYTPFIREKAPIRQSNLC</Hsp_hseq> |
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cpt
parents:
diff
changeset
|
1319 <Hsp_midline>+ + L QD+ +I+ E T Q + PT + +G + + SSC + D+++SIN + S+ G+ + IR +G+ + GVIPF K+ + V +Q G+R G+A Y ++H ++E+ L K E+ R+ + GV + + ME + + F +E+ G+ D+ F E YE K+ NI+KK++ AR+L + + + YV +IDN N+ P ++ +R SNLC</Hsp_midline> |
3e3d85f41503
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cpt
parents:
diff
changeset
|
1320 </Hsp> |
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cpt
parents:
diff
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|
1321 </Hit_hsps> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1322 </Hit> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1323 <Hit> |
3e3d85f41503
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parents:
diff
changeset
|
1324 <Hit_num>4</Hit_num> |
3e3d85f41503
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parents:
diff
changeset
|
1325 <Hit_id>gnl|BL_ORD_ID|776</Hit_id> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff
changeset
|
1326 <Hit_def>org_id=NC_015296.1_protein_id=YP_004327455.1 gene=nrdA locus_tag=Vi01_084c protein=Ribonucleoside-diphosphate reductase 1 subunit alpha</Hit_def> |
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parents:
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|
1327 <Hit_accession>776</Hit_accession> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
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|
1328 <Hit_len>758</Hit_len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
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|
1329 <Hit_hsps> |
3e3d85f41503
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parents:
diff
changeset
|
1330 <Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
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|
1331 <Hsp_num>1</Hsp_num> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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|
1332 <Hsp_bit-score>101.293</Hsp_bit-score> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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|
1333 <Hsp_score>251</Hsp_score> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
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|
1334 <Hsp_evalue>2.06525e-24</Hsp_evalue> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff
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|
1335 <Hsp_query-from>111</Hsp_query-from> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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|
1336 <Hsp_query-to>383</Hsp_query-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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|
1337 <Hsp_hit-from>160</Hsp_hit-from> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
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|
1338 <Hsp_hit-to>439</Hsp_hit-to> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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|
1339 <Hsp_query-frame>0</Hsp_query-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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|
1340 <Hsp_hit-frame>0</Hsp_hit-frame> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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|
1341 <Hsp_identity>70</Hsp_identity> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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|
1342 <Hsp_positive>136</Hsp_positive> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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|
1343 <Hsp_gaps>13</Hsp_gaps> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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|
1344 <Hsp_align-len>283</Hsp_align-len> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
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|
1345 <Hsp_qseq>DNVVFVEDYEQHNVRVALYLFQDDYAKARDMLIQLM---EQTLQPATPTYLHSG-KGNRGELSSCYIFVVDDTIESINFVANSVRNASKNSGGVSVEASRIRPKGATVQGNPNASQGVIPFAKNIEQGVSHFNQAGMRQGSAVVYLNVFHQDIEDFLSSKKINASEKVRLDTLSLGVTIPNKFMELVKDDRPLYTFDTS---NLYEVTGKHLDEIDFNEEYENLIKNDN---IKKKKLNARDLMTDIAKTQLESGYPYVFYIDNANDNHPLKGIGKVRASNLC</Hsp_qseq> |
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parents:
diff
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|
1346 <Hsp_hseq>DSKVYYETPQVMYMAIAMALFSAWDKETRLTMVKKFYEYASTGKFSLPTPIMSGVRTPTRQFSSCVLIKTGDTLDSINATAKSIVDYVSKRAGIGFDVGAIRGIGSPIRKGEMVHTGLVPFIKYLTGALKSCSQGGIRGGSATCYIPIWHYQFDDVVVLKNNRGLEENRERRIDYGIQINRVMFERLVNKQPLYLFDPKDNRDMYEAFFADVDK--FRTLYDNMVKAADAGLVRAKKMNAEEVFQMLLDQRSDTGRIYIAFVDHMNQYSPFN-LDTIYSSNLC</Hsp_hseq> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
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changeset
|
1347 <Hsp_midline>D+ V+ E + + +A+ LF + R +++ T + + PT + SG + + SSC + DT++SIN A S+ + G+ + IR G+ ++ G++PF K + + +Q G+R GSA Y+ ++H +D + K E+ R + G+ I E + + +PLY FD ++YE +D+ F Y+N++K + ++ KK+NA ++ + + ++G Y+ ++D+ N P + + +SNLC</Hsp_midline> |
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|
1348 </Hsp> |
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|
1349 </Hit_hsps> |
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|
1350 </Hit> |
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|
1351 <Hit> |
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|
1352 <Hit_num>5</Hit_num> |
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|
1353 <Hit_id>gnl|BL_ORD_ID|125</Hit_id> |
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|
1354 <Hit_def>org_id=NC_023693.1_protein_id=YP_009012406.1 gene=PHI92_gene_075 locus_tag=PHI92_gp097 protein=Phi92_gp075</Hit_def> |
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|
1355 <Hit_accession>125</Hit_accession> |
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|
1356 <Hit_len>754</Hit_len> |
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|
1357 <Hit_hsps> |
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|
1358 <Hsp> |
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|
1359 <Hsp_num>1</Hsp_num> |
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|
1360 <Hsp_bit-score>90.1225</Hsp_bit-score> |
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|
1361 <Hsp_score>222</Hsp_score> |
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|
1362 <Hsp_evalue>9.32717e-21</Hsp_evalue> |
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|
1363 <Hsp_query-from>169</Hsp_query-from> |
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|
1364 <Hsp_query-to>384</Hsp_query-to> |
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|
1365 <Hsp_hit-from>220</Hsp_hit-from> |
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1366 <Hsp_hit-to>431</Hsp_hit-to> |
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|
1367 <Hsp_query-frame>0</Hsp_query-frame> |
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|
1368 <Hsp_hit-frame>0</Hsp_hit-frame> |
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|
1369 <Hsp_identity>68</Hsp_identity> |
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|
1370 <Hsp_positive>104</Hsp_positive> |
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1371 <Hsp_gaps>10</Hsp_gaps> |
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|
1372 <Hsp_align-len>219</Hsp_align-len> |
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|
1373 <Hsp_qseq>SSCYIFVVDDTIESINFVANSVRNASKNSGGVSVEASRIRPKGATVQGNPNASQGVIPFAKNIEQGVSHFNQAGMRQGSAVVYLNVFHQDIEDFLSSKKINASEKVRLDTLSLGVTIPNKFMELVKD--DRPLYTFDTS-NLYEVTGKHLDEIDFNEEYENLIKNDNIKKKKLNARDLMTDIAKTQLESGYPYVFYIDNANDNHPLKGIGKVRASNLCK</Hsp_qseq> |
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|
1374 <Hsp_hseq>ASCCLFRADDTAESLAIANYLAHEYTLNNAGIGVNL-QTRATGQGVKNNRIVHGGLLPYLKWMETSVGASKQAS-RGGSATVTFTILEPDFEDLVRLKNPTTVSEKRVDKLDYSIVVNNAFLRRAAKGKDWMLVSYDEAPELYDALYKSEEE---FEEVYEKVSRKRIKKKFVKARDLLAEIITQRAETGRIYMFFADNANKHTPFKDV--IYQSNLCQ</Hsp_hseq> |
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|
1375 <Hsp_midline>+SC +F DDT ES+ + N+ G+ V + R G V+ N G++P+ K +E V QA R GSA V + D ED + K + R+D L + + N F+ D L ++D + LY+ K +E EE + IKKK + ARDL+ +I + E+G Y+F+ DNAN + P K + + SNLC+</Hsp_midline> |
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|
1376 </Hsp> |
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|
1377 </Hit_hsps> |
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|
1378 </Hit> |
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|
1379 <Hit> |
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|
1380 <Hit_num>6</Hit_num> |
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|
1381 <Hit_id>gnl|BL_ORD_ID|1865</Hit_id> |
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|
1382 <Hit_def>org_id=NC_005282.1_protein_id=NP_944991.1 gene=nrdA locus_tag=Felix01p212 protein=Ribonucleoside triphosphate reductase, alpha chain</Hit_def> |
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1383 <Hit_accession>1865</Hit_accession> |
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1384 <Hit_len>744</Hit_len> |
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1385 <Hit_hsps> |
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|
1386 <Hsp> |
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1387 <Hsp_num>1</Hsp_num> |
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1388 <Hsp_bit-score>59.3066</Hsp_bit-score> |
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|
1389 <Hsp_score>142</Hsp_score> |
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1390 <Hsp_evalue>9.15009e-11</Hsp_evalue> |
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1391 <Hsp_query-from>150</Hsp_query-from> |
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1392 <Hsp_query-to>383</Hsp_query-to> |
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1393 <Hsp_hit-from>194</Hsp_hit-from> |
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1394 <Hsp_hit-to>425</Hsp_hit-to> |
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|
1395 <Hsp_query-frame>0</Hsp_query-frame> |
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1396 <Hsp_hit-frame>0</Hsp_hit-frame> |
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|
1397 <Hsp_identity>55</Hsp_identity> |
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1398 <Hsp_positive>98</Hsp_positive> |
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|
1399 <Hsp_gaps>12</Hsp_gaps> |
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|
1400 <Hsp_align-len>239</Hsp_align-len> |
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|
1401 <Hsp_qseq>LQPATPT-YLHSGKGNRGELSSCYIFVVDDTIESINFVANSVRNASKNSGGVSVEASRIRPKGATVQGNPNASQGVIPFAKNIEQGVSHFNQAGMRQGSAVVYLNVFHQDIEDFLSSKKINASEKVRLDTLSLGVTIPNKFMELVKDDRPLYTF---DTSNLYEV-TGKHLDEIDFNEEYENLIKNDNIKKKKLNARDLMTDIAKTQLESGYPYVFYIDNANDNHPLKGIGKVRASNLC</Hsp_qseq> |
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|
1402 <Hsp_hseq>LKINAPTPYLNGLRATKSGYASCCLIKANDTAESLGIAAKVAYDMTTKQAGIGM-LMETRTIGDGIRQNTIEHMGKLPYYKLVRSSVEA-NKQKSRGGSANNFYTALDPQIEDLLRLKHPTTVPSKRINEMDYSFGTNDYFWQCVQYDTDWLLFSYKDAPKLYDMFYTASADEFAMAVGHA---VHSGVKHRRVKAREIAKLFIQQRYATGRVYPFFTNNANTHTPFK--EPLKMSNLC</Hsp_hseq> |
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|
1403 <Hsp_midline>L+ PT YL+ + + +SC + +DT ES+ A + + G+ + R G ++ N G +P+ K + V N+ R GSA + IED L K R++ + + F + V+ D F D LY++ DE + + +K +++ AR++ + + +G Y F+ +NAN + P K ++ SNLC</Hsp_midline> |
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|
1404 </Hsp> |
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|
1405 </Hit_hsps> |
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|
1406 </Hit> |
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|
1407 </Iteration_hits> |
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1408 <Iteration_stat> |
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1409 <Statistics> |
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1410 <Statistics_db-num>3263</Statistics_db-num> |
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1411 <Statistics_db-len>679396</Statistics_db-len> |
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1412 <Statistics_hsp-len>80</Statistics_hsp-len> |
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1413 <Statistics_eff-space>127180224</Statistics_eff-space> |
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|
1414 <Statistics_kappa>0.041</Statistics_kappa> |
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|
1415 <Statistics_lambda>0.267</Statistics_lambda> |
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|
1416 <Statistics_entropy>0.14</Statistics_entropy> |
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|
1417 </Statistics> |
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|
1418 </Iteration_stat> |
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1419 </Iteration> |
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1420 <Iteration> |
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|
1421 <Iteration_iter-num>22</Iteration_iter-num> |
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|
1422 <Iteration_query-ID>Query_22</Iteration_query-ID> |
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|
1423 <Iteration_query-def>1db52cf6-4bac-4492-964b-649504439bb4 [Location=[14418:15000](+);Name=1db52cf6-4bac-4492-964b-649504439bb4]</Iteration_query-def> |
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1424 <Iteration_query-len>193</Iteration_query-len> |
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1425 <Iteration_hits> |
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|
1426 <Hit> |
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1427 <Hit_num>1</Hit_num> |
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1428 <Hit_id>gnl|BL_ORD_ID|2239</Hit_id> |
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1429 <Hit_def>org_id=NC_000866.4_protein_id=NP_049795.1 gene=segE locus_tag=T4p183 protein=SegE homing endonuclease</Hit_def> |
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1430 <Hit_accession>2239</Hit_accession> |
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1431 <Hit_len>205</Hit_len> |
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1432 <Hit_hsps> |
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1433 <Hsp> |
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1434 <Hsp_num>1</Hsp_num> |
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1435 <Hsp_bit-score>78.9518</Hsp_bit-score> |
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1436 <Hsp_score>193</Hsp_score> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1437 <Hsp_evalue>1.09435e-19</Hsp_evalue> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1438 <Hsp_query-from>9</Hsp_query-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1439 <Hsp_query-to>104</Hsp_query-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1440 <Hsp_hit-from>5</Hsp_hit-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1441 <Hsp_hit-to>97</Hsp_hit-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1442 <Hsp_query-frame>0</Hsp_query-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1443 <Hsp_hit-frame>0</Hsp_hit-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1444 <Hsp_identity>44</Hsp_identity> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1445 <Hsp_positive>65</Hsp_positive> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1446 <Hsp_gaps>3</Hsp_gaps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1447 <Hsp_align-len>96</Hsp_align-len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1448 <Hsp_qseq>VYVTTCSVNGKKYIGKFLYNRINDWEKYLGSGRYLKEDIKKYGKDKFTKTIIKDYYTTEELEKAEEELILKTNAVYDDNYYNVKLSSVGGDIFTTN</Hsp_qseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1449 <Hsp_hseq>VYETTNLINGKKYIGKHSTDDLNDG--YLGSGKAIQQAIKKYGENNFSRTILKEFKTSEEAYMYEEEIIT-PELIKSKNYYNMKPGGIGGIVMTTD</Hsp_hseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1450 <Hsp_midline>VY TT +NGKKYIGK + +ND YLGSG+ +++ IKKYG++ F++TI+K++ T+EE EEE+I + NYYN+K +GG + TT+</Hsp_midline> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1451 </Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1452 </Hit_hsps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1453 </Hit> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1454 <Hit> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1455 <Hit_num>2</Hit_num> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1456 <Hit_id>gnl|BL_ORD_ID|2232</Hit_id> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1457 <Hit_def>org_id=NC_000866.4_protein_id=NP_049788.2 gene=segD locus_tag=T4p176 protein=SegD homing endonuclease</Hit_def> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1458 <Hit_accession>2232</Hit_accession> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1459 <Hit_len>223</Hit_len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1460 <Hit_hsps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1461 <Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1462 <Hsp_num>1</Hsp_num> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1463 <Hsp_bit-score>48.9062</Hsp_bit-score> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1464 <Hsp_score>115</Hsp_score> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1465 <Hsp_evalue>1.57958e-08</Hsp_evalue> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1466 <Hsp_query-from>9</Hsp_query-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1467 <Hsp_query-to>185</Hsp_query-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1468 <Hsp_hit-from>8</Hsp_hit-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1469 <Hsp_hit-to>222</Hsp_hit-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1470 <Hsp_query-frame>0</Hsp_query-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1471 <Hsp_hit-frame>0</Hsp_hit-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1472 <Hsp_identity>54</Hsp_identity> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1473 <Hsp_positive>99</Hsp_positive> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1474 <Hsp_gaps>54</Hsp_gaps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1475 <Hsp_align-len>223</Hsp_align-len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1476 <Hsp_qseq>VYVTTCSVNGKKYIGKFLYNRINDWEKYLGSGRYLKEDIKKYGKDKFTKTIIKDYYTTEELEKAE-----EELILKTNAVYDDNYYNVKLSSVGGDIFT--TNPRKEEIREMRKQQ-------------------------MRGQGNHQYGK----PKTEKMIN-SVKKANSR---------AIEIEGIKYESTSEASRILSIGHTTIGYRLDSDNYPEYRRL</Hsp_qseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1477 <Hsp_hseq>IYQITNIINGKIYIGA--HATLDENDGYMGSGVNIKKSIKKYGIHNFKKEILYSFSSSEEMYKMEALLVNEEFVMRTDT------YNAAIGGRGNPVIVHLQDPSYRNMLSIRTKEGMTVEAKRKISKAKTGVKQSDETIAKRVKGRNEYYKTHVHPRKNKPISISHRKAISEKLGGIKKFIPICIKGVKFDNPDYAAEHFKVSPKTIRNWINADDMPDCYRI</Hsp_hseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1478 <Hsp_midline>+Y T +NGK YIG + +++ + Y+GSG +K+ IKKYG F K I+ + ++EE+ K E EE +++T+ YN + G + +P + +R ++ R +G ++Y K P+ K I+ S +KA S I I+G+K+++ A+ + TI +++D+ P+ R+</Hsp_midline> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1479 </Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1480 </Hit_hsps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1481 </Hit> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1482 <Hit> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1483 <Hit_num>3</Hit_num> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1484 <Hit_id>gnl|BL_ORD_ID|2204</Hit_id> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1485 <Hit_def>org_id=NC_000866.4_protein_id=NP_049761.1 gene=segC locus_tag=T4p148 protein=SegC homing endonuclease</Hit_def> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1486 <Hit_accession>2204</Hit_accession> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1487 <Hit_len>140</Hit_len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1488 <Hit_hsps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1489 <Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1490 <Hsp_num>1</Hsp_num> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1491 <Hsp_bit-score>46.9802</Hsp_bit-score> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1492 <Hsp_score>110</Hsp_score> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1493 <Hsp_evalue>2.61363e-08</Hsp_evalue> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1494 <Hsp_query-from>9</Hsp_query-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
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|
1495 <Hsp_query-to>149</Hsp_query-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
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|
1496 <Hsp_hit-from>11</Hsp_hit-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1497 <Hsp_hit-to>139</Hsp_hit-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1498 <Hsp_query-frame>0</Hsp_query-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1499 <Hsp_hit-frame>0</Hsp_hit-frame> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1500 <Hsp_identity>43</Hsp_identity> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1501 <Hsp_positive>65</Hsp_positive> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1502 <Hsp_gaps>22</Hsp_gaps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1503 <Hsp_align-len>146</Hsp_align-len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1504 <Hsp_qseq>VYVTTCSVNGKKYIGKFLYNRINDWEKYLGSGRYLKEDIKKYGKDKFTKTIIKDYYTTEELEKAEEELILKTNAVYDDNYYNVKLSSVGGDIFTTNPRKEEIREMRKQQMRGQGNHQYGKPKTEKM-----INSVKKANSRAIEIE</Hsp_qseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1505 <Hsp_hseq>LYSITNKTTEKIYVGVHKTSNLDDG--YMGSGVAIKNAIKKYGIDNFYKHIIKFFESEKAMYDAEAEIVTE-EFVKSKKTYNMKLGGIGG--------------FPKHNTAGAKNGFYGKSHSRETRLKISIKSSRKRGPRGLEVK</Hsp_hseq> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1506 <Hsp_midline>+Y T K Y+G + ++D Y+GSG +K IKKYG D F K IIK + + + + AE E++ + V YN+KL +GG K G N YGK + + I S +K R +E++</Hsp_midline> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1507 </Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1508 </Hit_hsps> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1509 </Hit> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1510 <Hit> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1511 <Hit_num>4</Hit_num> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1512 <Hit_id>gnl|BL_ORD_ID|1860</Hit_id> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1513 <Hit_def>org_id=NC_005282.1_protein_id=NP_944980.1 locus_tag=Felix01p201 protein=Phage conserved protein</Hit_def> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
changeset
|
1514 <Hit_accession>1860</Hit_accession> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
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|
1515 <Hit_len>166</Hit_len> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
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|
1516 <Hit_hsps> |
3e3d85f41503
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parents:
diff
changeset
|
1517 <Hsp> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
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|
1518 <Hsp_num>1</Hsp_num> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff
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|
1519 <Hsp_bit-score>43.1282</Hsp_bit-score> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
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|
1520 <Hsp_score>100</Hsp_score> |
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
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|
1521 <Hsp_evalue>1.11276e-06</Hsp_evalue> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
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|
1522 <Hsp_query-from>4</Hsp_query-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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|
1523 <Hsp_query-to>76</Hsp_query-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
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|
1524 <Hsp_hit-from>27</Hsp_hit-from> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
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|
1525 <Hsp_hit-to>116</Hsp_hit-to> |
3e3d85f41503
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff
changeset
|
1526 <Hsp_query-frame>0</Hsp_query-frame> |
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|
1527 <Hsp_hit-frame>0</Hsp_hit-frame> |
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|
1528 <Hsp_identity>29</Hsp_identity> |
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|
1529 <Hsp_positive>40</Hsp_positive> |
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|
1530 <Hsp_gaps>17</Hsp_gaps> |
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|
1531 <Hsp_align-len>90</Hsp_align-len> |
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|
1532 <Hsp_qseq>KPVGAVYVTTCSVNGKKYIGKFLYNRI-----------------NDWEKYLGSGRYLKEDIKKYGKDKFTKTIIKDYYTTEELEKAEEEL</Hsp_qseq> |
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|
1533 <Hsp_hseq>KHFGFVYLVYCKKTGQYYLGKKQLNSVTKRKVAGKTRKKIVTKESDWMTYETSSDYIKKDIESFGKESFDFYIIQTYYTKGGLVYGEANL</Hsp_hseq> |
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|
1534 <Hsp_midline>K G VY+ C G+ Y+GK N + +DW Y S Y+K+DI+ +GK+ F II+ YYT L E L</Hsp_midline> |
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1535 </Hsp> |
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|
1536 </Hit_hsps> |
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1537 </Hit> |
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|
1538 <Hit> |
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|
1539 <Hit_num>5</Hit_num> |
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|
1540 <Hit_id>gnl|BL_ORD_ID|2098</Hit_id> |
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|
1541 <Hit_def>org_id=NC_000866.4_protein_id=NP_049657.1 gene=segA locus_tag=T4p042 protein=SegA homing endonuclease</Hit_def> |
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|
1542 <Hit_accession>2098</Hit_accession> |
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|
1543 <Hit_len>221</Hit_len> |
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1544 <Hit_hsps> |
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|
1545 <Hsp> |
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|
1546 <Hsp_num>1</Hsp_num> |
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|
1547 <Hsp_bit-score>43.1282</Hsp_bit-score> |
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|
1548 <Hsp_score>100</Hsp_score> |
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|
1549 <Hsp_evalue>1.41715e-06</Hsp_evalue> |
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1550 <Hsp_query-from>9</Hsp_query-from> |
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1551 <Hsp_query-to>92</Hsp_query-to> |
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1552 <Hsp_hit-from>12</Hsp_hit-from> |
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1553 <Hsp_hit-to>92</Hsp_hit-to> |
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1554 <Hsp_query-frame>0</Hsp_query-frame> |
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1555 <Hsp_hit-frame>0</Hsp_hit-frame> |
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|
1556 <Hsp_identity>32</Hsp_identity> |
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1557 <Hsp_positive>42</Hsp_positive> |
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|
1558 <Hsp_gaps>3</Hsp_gaps> |
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1559 <Hsp_align-len>84</Hsp_align-len> |
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|
1560 <Hsp_qseq>VYVTTCSVNGKKYIGKFLYNRINDWEKYLGSGRYLKEDIKKYGKDKFTKTIIKDYYTTEELEKAEEELILKTNAVYDDNYYNVK</Hsp_qseq> |
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|
1561 <Hsp_hseq>TYVITNLVNNKIYYGTHSTDDLND--GYMGSGTLLAQAKKKYGKKNFNLSILGFYKDFKSARDAERELVT-IDVVNDPMTYNLK</Hsp_hseq> |
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|
1562 <Hsp_midline> YV T VN K Y G + +ND Y+GSG L + KKYGK F +I+ Y + AE EL+ + V D YN+K</Hsp_midline> |
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1563 </Hsp> |
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|
1564 </Hit_hsps> |
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1565 </Hit> |
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|
1566 <Hit> |
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1567 <Hit_num>6</Hit_num> |
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1568 <Hit_id>gnl|BL_ORD_ID|2188</Hit_id> |
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|
1569 <Hit_def>org_id=NC_000866.4_protein_id=NP_049745.2 gene=segB locus_tag=T4p132 protein=SegB homing endonuclease</Hit_def> |
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|
1570 <Hit_accession>2188</Hit_accession> |
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1571 <Hit_len>221</Hit_len> |
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1572 <Hit_hsps> |
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1573 <Hsp> |
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|
1574 <Hsp_num>1</Hsp_num> |
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|
1575 <Hsp_bit-score>41.9726</Hsp_bit-score> |
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|
1576 <Hsp_score>97</Hsp_score> |
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1577 <Hsp_evalue>3.91155e-06</Hsp_evalue> |
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1578 <Hsp_query-from>9</Hsp_query-from> |
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1579 <Hsp_query-to>98</Hsp_query-to> |
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1580 <Hsp_hit-from>5</Hsp_hit-from> |
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1581 <Hsp_hit-to>91</Hsp_hit-to> |
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1582 <Hsp_query-frame>0</Hsp_query-frame> |
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1583 <Hsp_hit-frame>0</Hsp_hit-frame> |
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1584 <Hsp_identity>30</Hsp_identity> |
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1585 <Hsp_positive>47</Hsp_positive> |
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1586 <Hsp_gaps>3</Hsp_gaps> |
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1587 <Hsp_align-len>90</Hsp_align-len> |
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1588 <Hsp_qseq>VYVTTCSVNGKKYIGKFLYNRINDWEKYLGSGRYLKEDIKKYGKDKFTKTIIKDYYTTEELEKAEEELILKTNAVYDDNYYNVKLSSVGG</Hsp_qseq> |
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|
1589 <Hsp_hseq>TYKITNKINNKIYIGVHSTENLDD--GYMGSGKLLKRAQDKYGIENFSKEILEYFDDKESMLEAEKNIVTEEFLNRPD-VYNLKLGGEGG</Hsp_hseq> |
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1590 <Hsp_midline> Y T +N K YIG ++D Y+GSG+ LK KYG + F+K I++ + E + +AE+ ++ + D YN+KL GG</Hsp_midline> |
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1591 </Hsp> |
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1592 </Hit_hsps> |
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1593 </Hit> |
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1594 </Iteration_hits> |
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1595 <Iteration_stat> |
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1596 <Statistics> |
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1597 <Statistics_db-num>3263</Statistics_db-num> |
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1598 <Statistics_db-len>679396</Statistics_db-len> |
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1599 <Statistics_hsp-len>73</Statistics_hsp-len> |
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1600 <Statistics_eff-space>52943640</Statistics_eff-space> |
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1601 <Statistics_kappa>0.041</Statistics_kappa> |
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1602 <Statistics_lambda>0.267</Statistics_lambda> |
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1603 <Statistics_entropy>0.14</Statistics_entropy> |
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1604 </Statistics> |
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1605 </Iteration_stat> |
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1606 </Iteration> |
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1607 </BlastOutput_iterations> |
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1608 </BlastOutput> |
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1609 |