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comparison cpt-macros.xml @ 16:2c83f55438c9 draft default tip

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planemo upload commit f33bdf952d796c5d7a240b132af3c4cbd102decc
author cpt
date Fri, 05 Jan 2024 05:50:13 +0000
parents 1bf722ba06e3
children
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15:1bf722ba06e3 16:2c83f55438c9
1 <macros>
2 <xml name="gff_requirements">
3 <requirements>
4 <requirement type="package" version="2.7">python</requirement>
5 <requirement type="package" version="1.65">biopython</requirement>
6 <requirement type="package" version="2.12.1">requests</requirement>
7 <requirement type="package" version="1.2.2">cpt_gffparser</requirement>
8 <yield/>
9 </requirements>
10 <version_command>
11 <![CDATA[
12 cd '$__tool_directory__' && git rev-parse HEAD
13 ]]>
14 </version_command>
15 </xml>
16 <xml name="citation/mijalisrasche">
17 <citation type="doi">10.1371/journal.pcbi.1008214</citation>
18 <citation type="bibtex">@unpublished{galaxyTools,
19 author = {E. Mijalis, H. Rasche},
20 title = {CPT Galaxy Tools},
21 year = {2013-2017},
22 note = {https://github.com/tamu-cpt/galaxy-tools/}
23 }
24 </citation>
25 </xml>
26 <xml name="citations">
27 <citations>
28 <citation type="doi">10.1371/journal.pcbi.1008214</citation>
29 <citation type="bibtex">
30 @unpublished{galaxyTools,
31 author = {E. Mijalis, H. Rasche},
32 title = {CPT Galaxy Tools},
33 year = {2013-2017},
34 note = {https://github.com/tamu-cpt/galaxy-tools/}
35 }
36 </citation>
37 <yield/>
38 </citations>
39 </xml>
40 <xml name="citations-crr">
41 <citations>
42 <citation type="doi">10.1371/journal.pcbi.1008214</citation>
43 <citation type="bibtex">
44 @unpublished{galaxyTools,
45 author = {C. Ross},
46 title = {CPT Galaxy Tools},
47 year = {2020-},
48 note = {https://github.com/tamu-cpt/galaxy-tools/}
49 }
50 </citation>
51 <yield/>
52 </citations>
53 </xml>
54 <xml name="citations-2020">
55 <citations>
56 <citation type="doi">10.1371/journal.pcbi.1008214</citation>
57 <citation type="bibtex">
58 @unpublished{galaxyTools,
59 author = {E. Mijalis, H. Rasche},
60 title = {CPT Galaxy Tools},
61 year = {2013-2017},
62 note = {https://github.com/tamu-cpt/galaxy-tools/}
63 }
64 </citation>
65 <citation type="bibtex">
66 @unpublished{galaxyTools,
67 author = {A. Criscione},
68 title = {CPT Galaxy Tools},
69 year = {2019-2021},
70 note = {https://github.com/tamu-cpt/galaxy-tools/}
71 }
72 </citation>
73 <yield/>
74 </citations>
75 </xml>
76 <xml name="citations-2020-AJC-solo">
77 <citations>
78 <citation type="doi">10.1371/journal.pcbi.1008214</citation>
79 <citation type="bibtex">
80 @unpublished{galaxyTools,
81 author = {A. Criscione},
82 title = {CPT Galaxy Tools},
83 year = {2019-2021},
84 note = {https://github.com/tamu-cpt/galaxy-tools/}
85 }
86 </citation>
87 <yield/>
88 </citations>
89 </xml>
90 <xml name="citations-clm">
91 <citations>
92 <citation type="doi">10.1371/journal.pcbi.1008214</citation>
93 <citation type="bibtex">
94 @unpublished{galaxyTools,
95 author = {C. Maughmer},
96 title = {CPT Galaxy Tools},
97 year = {2017-2020},
98 note = {https://github.com/tamu-cpt/galaxy-tools/}
99 }
100 </citation>
101 <yield/>
102 </citations>
103 </xml>
104 <xml name="sl-citations-clm">
105 <citation type="bibtex">
106 @unpublished{galaxyTools,
107 author = {C. Maughmer},
108 title = {CPT Galaxy Tools},
109 year = {2017-2020},
110 note = {https://github.com/tamu-cpt/galaxy-tools/}
111 }
112 </citation>
113 <yield/>
114 </xml>
115 </macros>