annotate test-data/T7_ExtSeqIn.gff3 @ 5:ab40380424c9 draft

planemo upload commit 852ac96ca53a2ffa0947e6df5e24671866b642f5

##gff-version 3
NC_001604	GenBank	contig	1	39937	.	+	1	ID=NC_001604;Dbxref=BioProject:PRJNA485481,taxon:10760;Name=NC_001604;Note=Enterobacteria phage T7%2C complete genome.,VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from V01146. The sequence was submitted by the authors [1] on magnetic tape and revised according to [3],[4],and [5]. [3] made changes at 8 positions in gene 1 without affecting the size of the total sequence but changing gene 1 amino acids 443,474,and 388 to 424. [4] inserted a T at nucleotide 17511,increasing the total sequence to 39937 bp. This change,originally found in T3 DNA [8],revealed gene 5.9 and shortened gene 6. [5] changed the nucleotides at 11061 and 11062 from GT to TG,changing amino acid 119 of T7 lysozyme (gene 3.5) from glycine to valine. Features have been extracted from [1] unless otherwise noted. The sequence shown is that of the l strand,which corresponds to the sequence of all mRNAs of known functional significance. Early mRNAs are produced by three major promoters for E. coli RNA polymerase A1,A2,and A3,located near the left end of the DNA. A fourth major E. coli promoter,A0 (also called D),that would direct transcription leftward,and several minor E. coli promoters (see Table 6 in [1]) function in vitro but have no known in vivo function. Late mRNAs are produced by 15 promoters for T7 RNA polymerase distributed across the right-most 85%25 of the DNA,and named e.g. phi10,for the first gene downstream of the promoter. There are also two T7 promoters,phiOL and phiOR,associated with possible origins of replication at the left and right ends of T7 DNA. The 23 base-pair consensus sequence for T7 promoters stretches from -17 to +6,where the initiating nucleotide is at +1. T7 DNA also contains a 160 base-pair terminal repetition. The beginning and end of RNAs are determined by the promoters,by a terminator for E. coli RNA polymerase,TE,located at the end of the early region,a terminator for T7 RNA polymerase,Tphi,located just downstream of gene 10,and a series of RNase III cleavage sites. Early mRNAs made by E. coli RNA polymerase are listed in Features. The many RNAs predicted to be made by T7 RNA polymerase are not listed but can be deduced from the position of the transcription signals (see Tables 8 and 9 in [1]). Promoters are listed in Features by the known or predicted first nucleotide of the RNA,terminators by the last nucleotide of the RNA,and RNase III sites by the nucleotide 5' of the position of cleavage. Genes are numbered 0.3 to 19.5 in order of their left-to-right position on the genome. Proteins are named by the gene number,e.g.,the gene 1 protein,or by a functional name,e.g.,T7 RNA polymerase. There is now genetic or biochemical evidence that proteins are produced from at least 52 of the 56 T7 genes. Gene 4 produces two proteins,4A and 4B,by initiating translation at two different sites in the same reading frame. Gene 10 produces two proteins,10A and 10B,by frameshifting during translation. Genes 0.6 and 5.5 probably also make two proteins by translational frameshifting,the gene 5.5 frameshift producing a gene 5.5-5.7 fusion protein. COMPLETENESS: full length. ;comment1=VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from V01146. The sequence was submitted by the authors [1] on magnetic tape and revised according to [3]%2C [4]%2C and [5]. [3] made changes at 8 positions in gene 1 without affecting the size of the total sequence but changing gene 1 amino acids 443%2C 474%2C and 388 to 424. [4] inserted a T at nucleotide 17511%2C increasing the total sequence to 39937 bp. This change%2C originally found in T3 DNA [8]%2C revealed gene 5.9 and shortened gene 6. [5] changed the nucleotides at 11061 and 11062 from GT to TG%2C changing amino acid 119 of T7 lysozyme (gene 3.5) from glycine to valine. Features have been extracted from [1] unless otherwise noted. The sequence shown is that of the l strand%2C which corresponds to the sequence of all mRNAs of known functional significance. Early mRNAs are produced by three major promoters for E. coli RNA polymerase A1%2C A2%2C and A3%2C located near the left end of the DNA. A fourth major E. coli promoter%2C A0 (also called D)%2C that would direct transcription leftward%2C and several minor E. coli promoters (see Table 6 in [1]) function in vitro but have no known in vivo function. Late mRNAs are produced by 15 promoters for T7 RNA polymerase distributed across the right-most 85%25 of the DNA%2C and named e.g. phi10%2C for the first gene downstream of the promoter. There are also two T7 promoters%2C phiOL and phiOR%2C associated with possible origins of replication at the left and right ends of T7 DNA. The 23 base-pair consensus sequence for T7 promoters stretches from -17 to +6%2C where the initiating nucleotide is at +1. T7 DNA also contains a 160 base-pair terminal repetition. The beginning and end of RNAs are determined by the promoters%3B by a terminator for E. coli RNA polymerase%2C TE%2C located at the end of the early region%3B a terminator for T7 RNA polymerase%2C Tphi%2C located just downstream of gene 10%3B and a series of RNase III cleavage sites. Early mRNAs made by E. coli RNA polymerase are listed in Features. The many RNAs predicted to be made by T7 RNA polymerase are not listed but can be deduced from the position of the transcription signals (see Tables 8 and 9 in [1]). Promoters are listed in Features by the known or predicted first nucleotide of the RNA%2C terminators by the last nucleotide of the RNA%2C and RNase III sites by the nucleotide 5' of the position of cleavage. Genes are numbered 0.3 to 19.5 in order of their left-to-right position on the genome. Proteins are named by the gene number%2C e.g.%2C the gene 1 protein%2C or by a functional name%2C e.g.%2C T7 RNA polymerase. There is now genetic or biochemical evidence that proteins are produced from at least 52 of the 56 T7 genes. Gene 4 produces two proteins%2C 4A and 4B%2C by initiating translation at two different sites in the same reading frame. Gene 10 produces two proteins%2C 10A and 10B%2C by frameshifting during translation. Genes 0.6 and 5.5 probably also make two proteins by translational frameshifting%2C the gene 5.5 frameshift producing a gene 5.5-5.7 fusion protein. COMPLETENESS: full length. ;date=13-AUG-2018;host=Escherichia coli;mol_type=genomic DNA;organism=Escherichia phage T7;
NC_001604	GenBank	regulatory	224	224	.	+	1	ID=GenBank:regulatory:NC_001604:224:224;Note=E. coli promoter A0 (leftward);regulatory_class=promoter;
NC_001604	GenBank	regulatory	405	405	.	+	1	ID=GenBank:regulatory:NC_001604:405:405;Note=T7 promoter phiOL;regulatory_class=promoter;
NC_001604	GenBank	regulatory	498	498	.	+	1	ID=GenBank:regulatory:NC_001604:498:498;Note=E. coli promoter A1;regulatory_class=promoter;
NC_001604	GenBank	regulatory	626	626	.	+	1	ID=GenBank:regulatory:NC_001604:626:626;Note=E. coli promoter A2;regulatory_class=promoter;
NC_001604	GenBank	regulatory	750	750	.	+	1	ID=GenBank:regulatory:NC_001604:750:750;Note=E. coli promoter A3;regulatory_class=promoter;
NC_001604	GenBank	sequence_secondary_structure	890	890	.	+	1	ID=GenBank:sequence_secondary_structure:NC_001604:890:890;Note=RNase III site R0.3;
NC_001604	GenBank	gene	891	1468	.	+	1	ID=T7p01;Dbxref=GeneID:1261063;Name=T7p01;Note=gene 0.3;
NC_001604	GenBank	mRNA	891	1468	.	+	1	ID=T7p01.t01;Parent=T7p01;Dbxref=GeneID:1261063;Name=T7p01;product=0.3 mRNA;
NC_001604	GenBank	CDS	925	1278	.	+	1	ID=T7p01.p01;Parent=T7p01.t01;Dbxref=UniProtKB/Swiss-Prot:P03775,GeneID:1261063;Name=T7p01;Note=gene 0.3%2C inhibits EcoB and EcoK host restriction;codon_start=1;product=hypothetical protein;protein_id=NP_041954.1;transl_table=11;translation=length.117;
NC_001604	GenBank	exon	891	1468	.	+	1	Parent=T7p01.t01;Name=T7p01;
NC_001604	GenBank	sequence_secondary_structure	1468	1468	.	+	1	Parent=T7p01;Name=T7p01;Note=RNase III site R0.5;
NC_001604	GenBank	CDS	1278	1433	.	+	1	ID=T7p02;Dbxref=UniProtKB/Swiss-Prot:P03776,GeneID:1261053;Name=T7p02;Note=gene 0.4;codon_start=1;product=hypothetical protein;protein_id=NP_041955.1;transl_table=11;translation=length.51;
NC_001604	GenBank	gene	1278	1433	.	+	1	ID=T7p02.gene;Alias=T7p02;Dbxref=GeneID:1261053;Name=T7p02;Note=gene 0.4;
NC_001604	GenBank	gene	1469	3138	.	+	1	ID=T7p03;Dbxref=GeneID:1261070;Name=T7p03;Note=gene 0.7;
NC_001604	GenBank	mRNA	1469	3138	.	+	1	ID=T7p03.t01;Parent=T7p03;Dbxref=GeneID:1261070;Name=T7p03;product=0.7 mRNA;
NC_001604	GenBank	CDS	2021	3100	.	+	1	ID=T7p03.p01;Parent=T7p03.t01;Dbxref=GOA:P00513,UniProtKB/Swiss-Prot:P00513,GeneID:1261070;Name=T7p03;Note=The T7 seryl-threonyl protein kinase gp0.7 is involved in host transcription shutoff and Col Ib exclusion. Phosphorylates E. coli RNA polymerase. Other names: gp0.7.;codon_start=1;product=protein kinase;protein_id=NP_041959.1;transl_table=11;translation=length.359;
NC_001604	GenBank	exon	1469	3138	.	+	1	Parent=T7p03.t01;Name=T7p03;
NC_001604	GenBank	regulatory	3113	3113	.	+	1	Parent=T7p03;Name=T7p03;Note=E. coli C promoter;regulatory_class=promoter;
NC_001604	GenBank	sequence_secondary_structure	3138	3138	.	+	1	Parent=T7p03;Name=T7p03;Note=RNase III site R1;
NC_001604	GenBank	CDS	1496	1639	.	+	1	ID=T7p04;Dbxref=UniProtKB/Swiss-Prot:P03777,GeneID:1261051;Name=T7p04;Note=gene 0.5;codon_start=1;product=hypothetical protein;protein_id=NP_041956.1;transl_table=11;translation=length.47;
NC_001604	GenBank	regulatory	1514	1514	.	+	1	Parent=T7p04;Name=T7p04;Note=E. coli B promoter;regulatory_class=promoter;
NC_001604	GenBank	gene	1496	1639	.	+	1	ID=T7p04.gene;Alias=T7p04;Dbxref=GeneID:1261051;Name=T7p04;Note=gene 0.5;
NC_001604	GenBank	CDS	1636	1794	.	+	1	ID=T7p05.cds1;Dbxref=UniProtKB/Swiss-Prot:P03778,GeneID:1261061;Name=T7p05;Note=possible gene 0.6B;codon_start=1;product=hypothetical protein;protein_id=NP_041957.1;transl_table=11;translation=length.111;
NC_001604	GenBank	CDS	1796	1972	.	+	1	ID=T7p05.cds2;Dbxref=UniProtKB/Swiss-Prot:P03778,GeneID:1261061;Name=T7p05;Note=possible gene 0.6B;codon_start=1;product=hypothetical protein;protein_id=NP_041957.1;transl_table=11;translation=length.111;
NC_001604	GenBank	gene	1636	1972	.	+	1	ID=T7p05.gene;Alias=T7p05;Dbxref=GeneID:1261061;Name=T7p05;Note=possible gene 0.6B;
NC_001604	GenBank	CDS	1636	1797	.	+	1	ID=T7p06;Dbxref=UniProtKB/Swiss-Prot:P03778,GeneID:1261071;Name=T7p06;Note=gene 0.6A;codon_start=1;product=hypothetical protein;protein_id=NP_041958.1;transl_table=11;translation=length.53;
NC_001604	GenBank	gene	1636	1797	.	+	1	ID=T7p06.gene;Alias=T7p06;Dbxref=GeneID:1261071;Name=T7p06;Note=gene 0.6A;
NC_001604	GenBank	gene	3139	5887	.	+	1	ID=T7p07;Dbxref=GeneID:1261050;Name=T7p07;Note=gene 1;
NC_001604	GenBank	mRNA	3139	5887	.	+	1	ID=T7p07.t01;Parent=T7p07;Dbxref=GeneID:1261050;Name=T7p07;product=1 mRNA;
NC_001604	GenBank	CDS	3171	5822	.	+	1	ID=T7p07.p01;Parent=T7p07.t01;Dbxref=GOA:P00573,UniProtKB/Swiss-Prot:P00573,GeneID:1261050;Name=T7p07;Note=A family of single subunit RNA polymerases.;codon_start=1;product=T3/T7-like RNA polymerase;protein_id=NP_041960.1;transl_table=11;translation=length.883;
NC_001604	GenBank	exon	3139	5887	.	+	1	Parent=T7p07.t01;Name=T7p07;
NC_001604	GenBank	regulatory	5848	5848	.	+	1	Parent=T7p07;Name=T7p07;Note=T7 promoter phi1.1A;regulatory_class=promoter;
NC_001604	GenBank	sequence_secondary_structure	5887	5887	.	+	1	Parent=T7p07;Name=T7p07;Note=RNase III site R1.1;
NC_001604	GenBank	gene	5888	6448	.	+	1	ID=T7p08;Dbxref=GeneID:1261049;Name=T7p08;Note=gene 1.2;
NC_001604	GenBank	mRNA	5888	6448	.	+	1	ID=T7p08.t01;Parent=T7p08;Dbxref=GeneID:1261049;Name=T7p08;product=1.1 mRNA;
NC_001604	GenBank	CDS	6137	6394	.	+	1	ID=T7p08.p01;Parent=T7p08.t01;Dbxref=GOA:P03780,UniProtKB/Swiss-Prot:P03780,GeneID:1261049;Name=T7p08;Note=inhibits activity of the host dGTPase [dgt]. Essential only in strains that overexpress dGTPase [optA1 mutation]. In T7%2C gp1.2 also causes F plasmid exclusion. In T3%2C however%2C gp1.2 overcomes the exclusion system. Other names: dGTP triphosphohydrolase inhibitor%3B gp1.2.;codon_start=1;product=host dGTPase inhibitor;protein_id=NP_041962.1;transl_table=11;translation=length.85;
NC_001604	GenBank	exon	5888	6448	.	+	1	Parent=T7p08.t01;Name=T7p08;
NC_001604	GenBank	regulatory	5923	5923	.	+	1	Parent=T7p08;Name=T7p08;Note=T7 promoter phi1.1B;regulatory_class=promoter;
NC_001604	GenBank	regulatory	6409	6409	.	+	1	Parent=T7p08;Name=T7p08;Note=T7 promoter phi1.3;regulatory_class=promoter;
NC_001604	GenBank	sequence_secondary_structure	6448	6448	.	+	1	Parent=T7p08;Name=T7p08;Note=RNase III site R1.3;
NC_001604	GenBank	CDS	6007	6135	.	+	1	ID=T7p09;Dbxref=UniProtKB/Swiss-Prot:P03779,GeneID:1261072;Name=T7p09;Note=other names: gp1.1;codon_start=1;product=hypothetical protein;protein_id=NP_041961.1;transl_table=11;translation=length.42;
NC_001604	GenBank	gene	6007	6135	.	+	1	ID=T7p09.gene;Alias=T7p09;Dbxref=GeneID:1261072;Name=T7p09;Note=gene 1.1;
NC_001604	GenBank	gene	6449	7588	.	+	1	ID=T7p10;Dbxref=GeneID:1261055;Name=T7p10;Note=gene 1.3;
NC_001604	GenBank	mRNA	6449	7588	.	+	1	ID=T7p10.t01;Parent=T7p10;Dbxref=GeneID:1261055;Name=T7p10;product=1.3 mRNA;
NC_001604	GenBank	CDS	6475	7554	.	+	1	ID=T7p10.p01;Parent=T7p10.t01;Dbxref=GOA:P00969,UniProtKB/Swiss-Prot:P00969,GeneID:1261055;Name=T7p10;Note=Catalyzes the ATP-dependent formation of a phosphodiester bond at the site of single-stranded breaks in double-stranded DNA. T7 ligase is essential in ligase-deficient hosts only.;codon_start=1;product=ATP-dependent DNA ligase;protein_id=NP_041963.1;transl_table=11;translation=length.359;
NC_001604	GenBank	exon	6449	7588	.	+	1	Parent=T7p10.t01;Name=T7p10;
NC_001604	GenBank	regulatory	7588	7588	.	+	1	Parent=T7p10;Name=T7p10;Note=E. coli transcription terminator TE;regulatory_class=terminator;
NC_001604	GenBank	CDS	7608	7763	.	+	1	ID=T7p11;Dbxref=UniProtKB/Swiss-Prot:P03791,GeneID:1261075;Name=T7p11;Note=gene 1.4;codon_start=1;product=hypothetical protein;protein_id=NP_041964.1;transl_table=11;translation=length.51;
NC_001604	GenBank	regulatory	7778	7778	.	+	1	ID=GenBank:regulatory:NC_001604:7778:7778;Note=T7 promoter phi1.5;regulatory_class=promoter;
NC_001604	GenBank	gene	7608	7763	.	+	1	ID=T7p11.gene;Alias=T7p11;Dbxref=GeneID:1261075;Name=T7p11;Note=gene 1.4;
NC_001604	GenBank	CDS	7791	7880	.	+	1	ID=T7p12;Dbxref=UniProtKB/Swiss-Prot:P03792,GeneID:1261074;Name=T7p12;Note=gene 1.5;codon_start=1;product=hypothetical protein;protein_id=NP_041965.1;transl_table=11;translation=length.29;
NC_001604	GenBank	regulatory	7895	7895	.	+	1	ID=GenBank:regulatory:NC_001604:7895:7895;Note=T7 promoter phi1.6;regulatory_class=promoter;
NC_001604	GenBank	gene	7791	7880	.	+	1	ID=T7p12.gene;Alias=T7p12;Dbxref=GeneID:1261074;Name=T7p12;Note=gene 1.5;
NC_001604	GenBank	CDS	7906	8166	.	+	1	ID=T7p13;Dbxref=UniProtKB/Swiss-Prot:P03793,GeneID:1261076;Name=T7p13;Note=gene 1.6;codon_start=1;product=hypothetical protein;protein_id=NP_041966.1;transl_table=11;translation=length.86;
NC_001604	GenBank	gene	7906	8166	.	+	1	ID=T7p13.gene;Alias=T7p13;Dbxref=GeneID:1261076;Name=T7p13;Note=gene 1.6;
NC_001604	GenBank	CDS	8166	8756	.	+	1	ID=T7p14;Dbxref=UniProtKB/Swiss-Prot:P03781,GeneID:1261060;Name=T7p14;Note=gene 1.7;codon_start=1;product=hypothetical protein;protein_id=NP_041967.1;transl_table=11;translation=length.196;
NC_001604	GenBank	gene	8166	8756	.	+	1	ID=T7p14.gene;Alias=T7p14;Dbxref=GeneID:1261060;Name=T7p14;Note=gene 1.7;
NC_001604	GenBank	CDS	8749	8895	.	+	1	ID=T7p15;Dbxref=UniProtKB/Swiss-Prot:P03794,GeneID:1261054;Name=T7p15;Note=not essential in T7. Other names: gp1.8;codon_start=1;product=hypothetical protein;protein_id=NP_041968.1;transl_table=11;translation=length.48;
NC_001604	GenBank	gene	8749	8895	.	+	1	ID=T7p15.gene;Alias=T7p15;Dbxref=GeneID:1261054;Name=T7p15;Note=gene 1.8;
NC_001604	GenBank	CDS	8898	9092	.	+	1	ID=T7p16;Dbxref=UniProtKB/Swiss-Prot:P03704,GeneID:1261073;Name=T7p16;Note=T7 RNA polymerase inhibitor binds to host RNA pol and suppresses its activity on a subset of promoters. gp2 deficient T7 display reduced DNA replication and premature breakdown of replicating DNA%2C specifically at the left end of the genome%2C along with the presence of empty proheads. Rifampin can compensate for the missing gp2 function. Other names: gp2.;codon_start=1;product=inhibitor of host bacterial RNA polymerase;protein_id=NP_041969.1;transl_table=11;translation=length.64;
NC_001604	GenBank	regulatory	9107	9107	.	+	1	ID=GenBank:regulatory:NC_001604:9107:9107;Note=T7 promoter phi2.5;regulatory_class=promoter;
NC_001604	GenBank	gene	8898	9092	.	+	1	ID=T7p16.gene;Alias=T7p16;Dbxref=GeneID:1261073;Name=T7p16;Note=gene 2;
NC_001604	GenBank	CDS	9158	9856	.	+	1	ID=T7p17;Dbxref=GOA:P03696,UniProtKB/Swiss-Prot:P03696,GeneID:1261080;Name=T7p17;Note=binds single-stranded DNA. In phage T7 gp2.5 is essential for DNA replication and recombination. Other names: gp2.5%3B SSB.;codon_start=1;product=single-stranded DNA-binding protein;protein_id=NP_041970.1;transl_table=11;translation=length.232;
NC_001604	GenBank	gene	9158	9856	.	+	1	ID=T7p17.gene;Alias=T7p17;Dbxref=GeneID:1261080;Name=T7p17;Note=gene 2.5;
NC_001604	GenBank	CDS	9857	10276	.	+	1	ID=T7p18;Dbxref=GOA:P03795,UniProtKB/Swiss-Prot:P03795,GeneID:1261078;Name=T7p18;Note=gene 2.8;codon_start=1;product=hypothetical protein;protein_id=NP_041971.1;transl_table=11;translation=length.139;
NC_001604	GenBank	gene	9857	10276	.	+	1	ID=T7p18.gene;Alias=T7p18;Dbxref=GeneID:1261078;Name=T7p18;Note=gene 2.8;
NC_001604	GenBank	CDS	10257	10706	.	+	1	ID=T7p19;Dbxref=GOA:P00641,UniProtKB/Swiss-Prot:P00641,GeneID:1261079;Name=T7p19;Note=T7 endonuclease I is a Holliday junction resolvase encoded by T7 gene 3. Mutants in gene 3 are defective in recombination and accumulate branched DNA. Endonuclease I may also play a role in the degradation of the host genome following infection with T7.;codon_start=1;product=endonuclease I;protein_id=NP_041972.1;transl_table=11;translation=length.149;
NC_001604	GenBank	gene	10257	10706	.	+	1	ID=T7p19.gene;Alias=T7p19;Dbxref=GeneID:1261079;Name=T7p19;Note=gene 3;
NC_001604	GenBank	CDS	10706	11161	.	+	1	ID=T7p20;Dbxref=GOA:P00806,UniProtKB/Swiss-Prot:P00806,GeneID:1261077;Name=T7p20;Note=T7 lysozyme hydrolyzes an amide bond in the host cell wall following its release from the cytoplasm. In addition%2C T7 lysozyme inhibits T7 RNA polymerase initiation. This inhibition is greater for class II promoters than class III promoters and therefore may aid in temporal regulation of transcription and the switch to particle assembly. In T7%2C lysozyme%2C unlike the T7 holin%2C is expressed with and lies in the same region as the replication genes. Lack of gp3.5 reduces replication and burst size and delays%2C but does not completely prevent lysis. Mutations in the muralytic domain of gene 16%2C an inner capsid protein%2C can partially compensate for a deletion of gp3.5. Other names: gp3.5%3B amidase%3B N-acetylmuramoyl-L-alanine amidase;codon_start=1;product=lysozyme;protein_id=NP_041973.1;transl_table=11;translation=length.151;
NC_001604	GenBank	regulatory	11180	11180	.	+	1	ID=GenBank:regulatory:NC_001604:11180:11180;Note=T7 promoter phi3.8;regulatory_class=promoter;
NC_001604	GenBank	sequence_secondary_structure	11203	11203	.	+	1	ID=GenBank:sequence_secondary_structure:NC_001604:11203:11203;Note=possible RNase III site R3.8;
NC_001604	GenBank	gene	10706	11161	.	+	1	ID=T7p20.gene;Alias=T7p20;Dbxref=GeneID:1261077;Name=T7p20;Note=gene 3.5;
NC_001604	GenBank	CDS	11225	11590	.	+	1	ID=T7p21;Dbxref=GOA:P03797,UniProtKB/Swiss-Prot:P03797,GeneID:1261065;Name=T7p21;Note=gene 3.8;codon_start=1;product=putative NHN endonuclease;protein_id=NP_041974.1;transl_table=11;translation=length.121;
NC_001604	GenBank	gene	11225	11590	.	+	1	ID=T7p21.gene;Alias=T7p21;Dbxref=GeneID:1261065;Name=T7p21;Note=gene 3.8;
NC_001604	GenBank	CDS	11565	13265	.	+	1	ID=T7p22;Dbxref=GOA:P03692,UniProtKB/Swiss-Prot:P03692,GeneID:1261046;Name=T7p22;Note=gene 4A%2C primase/helicase [14%2C15];codon_start=1;product=DNA primase/helicase;protein_id=NP_041975.1;transl_table=11;translation=length.566;
NC_001604	GenBank	gene	11565	13265	.	+	1	ID=T7p22.gene;Alias=T7p22;Dbxref=GeneID:1261046;Name=T7p22;Note=gene 4A;
NC_001604	GenBank	CDS	11635	11757	.	+	1	ID=T7p23;Dbxref=UniProtKB/Swiss-Prot:P03782,GeneID:1261047;Name=T7p23;Note=gene 4.1;codon_start=1;product=hypothetical protein;protein_id=NP_041976.1;transl_table=11;translation=length.40;
NC_001604	GenBank	gene	11635	11757	.	+	1	ID=T7p23.gene;Alias=T7p23;Dbxref=GeneID:1261047;Name=T7p23;Note=gene 4.1;
NC_001604	GenBank	CDS	11754	13265	.	+	1	ID=T7p24;Dbxref=GOA:P03692,UniProtKB/Swiss-Prot:P03692,GeneID:1261048;Name=T7p24;Note=gene 4B/helicase [14%2C15];codon_start=1;product=helicase;protein_id=NP_041977.1;transl_table=11;translation=length.503;
NC_001604	GenBank	regulatory	12671	12671	.	+	1	Parent=T7p24;Name=T7p24;Note=T7 promoter phi4c;regulatory_class=promoter;
NC_001604	GenBank	gene	11754	13265	.	+	1	ID=T7p24.gene;Alias=T7p24;Dbxref=GeneID:1261048;Name=T7p24;Note=gene 4B;
NC_001604	GenBank	CDS	12988	13326	.	+	1	ID=T7p25;Dbxref=UniProtKB/Swiss-Prot:P03783,GeneID:1261021;Name=T7p25;Note=gene 4.2;codon_start=1;product=hypothetical protein;protein_id=NP_041978.1;transl_table=11;translation=length.112;
NC_001604	GenBank	regulatory	13341	13341	.	+	1	ID=GenBank:regulatory:NC_001604:13341:13341;Note=T7 promoter phi4.3;regulatory_class=promoter;
NC_001604	GenBank	gene	12988	13326	.	+	1	ID=T7p25.gene;Alias=T7p25;Dbxref=GeneID:1261021;Name=T7p25;Note=gene 4.2;
NC_001604	GenBank	CDS	13352	13564	.	+	1	ID=T7p26;Dbxref=UniProtKB/Swiss-Prot:P03784,GeneID:1261069;Name=T7p26;Note=not essential in T7%3B Other names: gp4.3.;codon_start=1;product=hypothetical protein;protein_id=NP_041979.1;transl_table=11;translation=length.70;
NC_001604	GenBank	gene	13352	13564	.	+	1	ID=T7p26.gene;Alias=T7p26;Dbxref=GeneID:1261069;Name=T7p26;Note=gene 4.3;
NC_001604	GenBank	CDS	13584	13853	.	+	1	ID=T7p27;Dbxref=UniProtKB/Swiss-Prot:P03785,GeneID:1261059;Name=T7p27;Note=not essential in T7. Other names: gp4.5.;codon_start=1;product=hypothetical protein;protein_id=NP_041980.1;transl_table=11;translation=length.89;
NC_001604	GenBank	sequence_secondary_structure	13892	13892	.	+	1	ID=GenBank:sequence_secondary_structure:NC_001604:13892:13892;Note=RNase III site R4.7;
NC_001604	GenBank	regulatory	13915	13915	.	+	1	ID=GenBank:regulatory:NC_001604:13915:13915;Note=T7 promoter phi4.7;regulatory_class=promoter;
NC_001604	GenBank	gene	13584	13853	.	+	1	ID=T7p27.gene;Alias=T7p27;Dbxref=GeneID:1261059;Name=T7p27;Note=gene 4.5;
NC_001604	GenBank	CDS	13927	14334	.	+	1	ID=T7p28;Dbxref=UniProtKB/Swiss-Prot:P03786,GeneID:1261043;Name=T7p28;Note=gene 4.7;codon_start=1;product=hypothetical protein;protein_id=NP_041981.1;transl_table=11;translation=length.135;
NC_001604	GenBank	gene	13927	14334	.	+	1	ID=T7p28.gene;Alias=T7p28;Dbxref=GeneID:1261043;Name=T7p28;Note=gene 4.7;
NC_001604	GenBank	CDS	14353	16467	.	+	1	ID=T7p29;Dbxref=GOA:P00581,UniProtKB/Swiss-Prot:P00581,GeneID:1261044;Name=T7p29;Note=gene 5;codon_start=1;product=DNA polymerase;protein_id=NP_041982.1;transl_table=11;translation=length.704;
NC_001604	GenBank	gene	14353	16467	.	+	1	ID=T7p29.gene;Alias=T7p29;Dbxref=GeneID:1261044;Name=T7p29;Note=gene 5;
NC_001604	GenBank	CDS	16483	16839	.	+	1	ID=T7p30;Dbxref=UniProtKB/Swiss-Prot:P03798,GeneID:1261045;Name=T7p30;Note=gene 5.3;codon_start=1;product=hypothetical protein;protein_id=NP_041983.1;transl_table=11;translation=length.118;
NC_001604	GenBank	gene	16483	16839	.	+	1	ID=T7p30.gene;Alias=T7p30;Dbxref=GeneID:1261045;Name=T7p30;Note=gene 5.3;
NC_001604	GenBank	CDS	16851	17147	.	+	1	ID=T7p31.cds1;Dbxref=GOA:P03787,UniProtKB/Swiss-Prot:P03787,GeneID:1261041;Name=T7p31;Note=possible gene 5.5-5.7;codon_start=1;product=hypothetical protein;protein_id=NP_041984.1;transl_table=11;translation=length.169;
NC_001604	GenBank	CDS	17147	17359	.	+	1	ID=T7p31.cds2;Dbxref=GOA:P03787,UniProtKB/Swiss-Prot:P03787,GeneID:1261041;Name=T7p31;Note=possible gene 5.5-5.7;codon_start=1;product=hypothetical protein;protein_id=NP_041984.1;transl_table=11;translation=length.169;
NC_001604	GenBank	gene	16851	17359	.	+	1	ID=T7p31.gene;Alias=T7p31;Dbxref=GeneID:1261041;Name=T7p31;Note=possible gene 5.5-5.7;
NC_001604	GenBank	CDS	16851	17150	.	+	1	ID=T7p32;Dbxref=GOA:P03787,UniProtKB/Swiss-Prot:P03787,GeneID:1261038;Name=T7p32;Note=in Enterobacteria phage T7%2C gp5.5 abolishes E. coli nucleoid protein H-NS-mediated inhibition of transcription by T7 RNA polymerases in vitro. Not essential%2C but mutants have lower burst size. Mutants in this gene are not capable of replicating in phage lambda lysogens. Other names: gp5.5;codon_start=1;product=host protein H-NS-interacting protein;protein_id=NP_041985.1;transl_table=11;translation=length.99;
NC_001604	GenBank	gene	16851	17150	.	+	1	ID=T7p32.gene;Alias=T7p32;Dbxref=GeneID:1261038;Name=T7p32;Note=gene 5.5;
NC_001604	GenBank	CDS	17150	17359	.	+	1	ID=T7p33;Dbxref=GOA:P03787,UniProtKB/Swiss-Prot:P03787,GeneID:1261040;Name=T7p33;Note=gene 5.7;codon_start=1;product=hypothetical protein;protein_id=NP_041986.1;transl_table=11;translation=length.69;
NC_001604	GenBank	gene	17150	17359	.	+	1	ID=T7p33.gene;Alias=T7p33;Dbxref=GeneID:1261040;Name=T7p33;Note=gene 5.7;
NC_001604	GenBank	CDS	17359	17517	.	+	1	ID=T7p34;Dbxref=UniProtKB/Swiss-Prot:P20406,GeneID:1261037;Name=T7p34;Note=not essential. Other names: gp5.9%3B exonuclease V inhibitor;codon_start=1;product=host recBCD nuclease inhibitor;protein_id=NP_041987.1;transl_table=11;translation=length.52;
NC_001604	GenBank	gene	17359	17517	.	+	1	ID=T7p34.gene;Alias=T7p34;Dbxref=GeneID:1261037;Name=T7p34;Note=gene 5.9;
NC_001604	GenBank	CDS	17504	18406	.	+	1	ID=T7p35;Dbxref=GOA:P00638,UniProtKB/Swiss-Prot:P00638,GeneID:1261052;Name=T7p35;Note=The T7 exonuclease encoded by gene 6 is required for (a) recombination and (b) for the degradation of host chromosomal DNA. The latter process provides nucleotides for phage DNA replication. Both processes are carried out together with the T7 gene 3-encoded endonuclease/Holliday junction resolvase. In addition%2C the exonuclease also functions as an RNase H that removes RNA primers during DNA replication and promotes concatemer formation.;codon_start=1;product=exonuclease;protein_id=NP_041988.1;transl_table=11;translation=length.300;
NC_001604	GenBank	gene	17504	18406	.	+	1	ID=T7p35.gene;Alias=T7p35;Dbxref=GeneID:1261052;Name=T7p35;Note=gene 6;
NC_001604	GenBank	CDS	18394	18507	.	+	1	ID=T7p36;Dbxref=UniProtKB/Swiss-Prot:P03799,GeneID:1261058;Name=T7p36;Note=gene 6.3;codon_start=1;product=hypothetical protein;protein_id=NP_041989.1;transl_table=11;translation=length.37;
NC_001604	GenBank	regulatory	18545	18545	.	+	1	ID=GenBank:regulatory:NC_001604:18545:18545;Note=T7 promoter phi6.5;regulatory_class=promoter;
NC_001604	GenBank	sequence_secondary_structure	18563	18563	.	+	1	ID=GenBank:sequence_secondary_structure:NC_001604:18563:18563;Note=RNase III site R6.5;
NC_001604	GenBank	gene	18394	18507	.	+	1	ID=T7p36.gene;Alias=T7p36;Dbxref=GeneID:1261058;Name=T7p36;Note=gene 6.3;
NC_001604	GenBank	CDS	18605	18859	.	+	1	ID=T7p37;Dbxref=UniProtKB/Swiss-Prot:P03800,GeneID:1261036;Name=T7p37;Note=gene 6.5;codon_start=1;product=hypothetical protein;protein_id=NP_041990.1;transl_table=11;translation=length.84;
NC_001604	GenBank	gene	18605	18859	.	+	1	ID=T7p37.gene;Alias=T7p37;Dbxref=GeneID:1261036;Name=T7p37;Note=gene 6.5;
NC_001604	GenBank	CDS	18864	19130	.	+	1	ID=T7p38;Dbxref=UniProtKB/Swiss-Prot:P03801,GeneID:1261039;Name=T7p38;Note=may be involved in virion morphogenesis and is injected from virion into host cell. Other names: gp6.7;codon_start=1;product=hypothetical protein;protein_id=NP_041991.1;transl_table=11;translation=length.88;
NC_001604	GenBank	gene	18864	19130	.	+	1	ID=T7p38.gene;Alias=T7p38;Dbxref=GeneID:1261039;Name=T7p38;Note=gene 6.7;
NC_001604	GenBank	CDS	19130	19531	.	+	1	ID=T7p39;Dbxref=UniProtKB/Swiss-Prot:P03750,GeneID:1261056;Name=T7p39;Note=gene 7%2C host range;codon_start=1;product=hypothetical protein;protein_id=NP_041992.1;transl_table=11;translation=length.133;
NC_001604	GenBank	gene	19130	19531	.	+	1	ID=T7p39.gene;Alias=T7p39;Dbxref=GeneID:1261056;Name=T7p39;Note=gene 7;
NC_001604	GenBank	CDS	19535	19834	.	+	1	ID=T7p40;Dbxref=UniProtKB/Swiss-Prot:P03751,GeneID:1261035;Name=T7p40;Note=required for virion infectivity but not morphogenesis. In T7%2C gp 7.3 appears to be required for the assembly of tail fibers on capsids. Other names: gp7.3;codon_start=1;product=tail assembly protein;protein_id=NP_041993.1;transl_table=11;translation=length.99;
NC_001604	GenBank	gene	19535	19834	.	+	1	ID=T7p40.gene;Alias=T7p40;Dbxref=GeneID:1261035;Name=T7p40;Note=gene 7.3;
NC_001604	GenBank	CDS	19848	20240	.	+	1	ID=T7p41;Dbxref=GOA:P03796,UniProtKB/Swiss-Prot:P03796,GeneID:1261028;Name=T7p41;Note=gene 7.7;codon_start=1;product=hypothetical protein;protein_id=NP_041994.1;transl_table=11;translation=length.130;
NC_001604	GenBank	gene	19848	20240	.	+	1	ID=T7p41.gene;Alias=T7p41;Dbxref=GeneID:1261028;Name=T7p41;Note=gene 7.7;
NC_001604	GenBank	CDS	20240	21850	.	+	1	ID=T7p42;Dbxref=GOA:P03728,UniProtKB/Swiss-Prot:P03728,GeneID:1261033;Name=T7p42;Note=gene 8;codon_start=1;product=head-tail connector protein;protein_id=NP_041995.1;transl_table=11;translation=length.536;
NC_001604	GenBank	regulatory	21865	21865	.	+	1	ID=GenBank:regulatory:NC_001604:21865:21865;Note=T7 promoter phi9;regulatory_class=promoter;
NC_001604	GenBank	gene	20240	21850	.	+	1	ID=T7p42.gene;Alias=T7p42;Dbxref=GeneID:1261033;Name=T7p42;Note=gene 8;
NC_001604	GenBank	CDS	21950	22873	.	+	1	ID=T7p43;Dbxref=GOA:P03716,UniProtKB/Swiss-Prot:P03716,GeneID:1261027;Name=T7p43;Note=Phage T7-like scaffolding protein. The protein is encoded by gene 9 in T7 (gp9) and is required for the formation of pro-capsids.;codon_start=1;product=capsid assembly protein;protein_id=NP_041996.1;transl_table=11;translation=length.307;
NC_001604	GenBank	regulatory	22904	22904	.	+	1	ID=GenBank:regulatory:NC_001604:22904:22904;Note=T7 promoter phi10;regulatory_class=promoter;
NC_001604	GenBank	gene	21950	22873	.	+	1	ID=T7p43.gene;Alias=T7p43;Dbxref=GeneID:1261027;Name=T7p43;Note=gene 9;
NC_001604	GenBank	CDS	22967	23989	.	+	1	ID=T7p44.cds1;Dbxref=GOA:P19727,UniProtKB/Swiss-Prot:P19727,GeneID:1261029;Name=T7p44;Note=major capsid protein. Involved in F-exclusion of wt T7 phage. A minor capsid protein (gp10B) is produced from gene 10 by a -1 frameshift towards the end of 10A%2C resulting in a slightly larger protein. Other names: gp10A.;codon_start=1;product=major capsid protein;protein_id=NP_041997.1;transl_table=11;translation=length.398;
NC_001604	GenBank	CDS	23989	24162	.	+	1	ID=T7p44.cds2;Dbxref=GOA:P19727,UniProtKB/Swiss-Prot:P19727,GeneID:1261029;Name=T7p44;Note=major capsid protein. Involved in F-exclusion of wt T7 phage. A minor capsid protein (gp10B) is produced from gene 10 by a -1 frameshift towards the end of 10A%2C resulting in a slightly larger protein. Other names: gp10A.;codon_start=1;product=major capsid protein;protein_id=NP_041997.1;transl_table=11;translation=length.398;
NC_001604	GenBank	gene	22967	24162	.	+	1	ID=T7p44.gene;Alias=T7p44;Dbxref=GeneID:1261029;Name=T7p44;Note=gene 10B;
NC_001604	GenBank	CDS	22967	24004	.	+	1	ID=T7p45;Dbxref=GOA:P19726,UniProtKB/Swiss-Prot:P19726,GeneID:1261026;Name=T7p45;Note=major capsid protein. Involved in F-exclusion of wt T7 phage. A minor capsid protein (gp10B) is produced from gene 10 by a -1 frameshift towards the end of 10A%2C resulting in a slightly larger protein. Other names: gp10A.;codon_start=1;product=major capsid protein;protein_id=NP_041998.1;transl_table=11;translation=length.345;
NC_001604	GenBank	regulatory	24210	24210	.	+	1	ID=GenBank:regulatory:NC_001604:24210:24210;Note=T7 transcription terminator Tphi;regulatory_class=terminator;
NC_001604	GenBank	gene	22967	24004	.	+	1	ID=T7p45.gene;Alias=T7p45;Dbxref=GeneID:1261026;Name=T7p45;Note=gene 10A;
NC_001604	GenBank	CDS	24228	24818	.	+	1	ID=T7p46;Dbxref=UniProtKB/Swiss-Prot:P03746,GeneID:1261030;Name=T7p46;Note=Tail tubular proteins A and B are required for assembly of tails of T7-like phages.;codon_start=1;product=tail tubular protein A;protein_id=NP_041999.1;transl_table=11;translation=length.196;
NC_001604	GenBank	gene	24228	24818	.	+	1	ID=T7p46.gene;Alias=T7p46;Dbxref=GeneID:1261030;Name=T7p46;Note=gene 11;
NC_001604	GenBank	CDS	24842	27226	.	+	1	ID=T7p47;Dbxref=UniProtKB/Swiss-Prot:P03747,GeneID:1261024;Name=T7p47;Note=gene 12;codon_start=1;product=tail tubular protein B;protein_id=NP_042000.1;transl_table=11;translation=length.794;
NC_001604	GenBank	regulatory	27274	27274	.	+	1	ID=GenBank:regulatory:NC_001604:27274:27274;Note=T7 promoter phi13;regulatory_class=promoter;
NC_001604	GenBank	sequence_secondary_structure	27281	27281	.	+	1	ID=GenBank:sequence_secondary_structure:NC_001604:27281:27281;Note=possible RNase III site R13;
NC_001604	GenBank	gene	24842	27226	.	+	1	ID=T7p47.gene;Alias=T7p47;Dbxref=GeneID:1261024;Name=T7p47;Note=gene 12;
NC_001604	GenBank	CDS	27307	27723	.	+	1	ID=T7p48;Dbxref=UniProtKB/Swiss-Prot:P03723,GeneID:1261025;Name=T7p48;Note=gene 13;codon_start=1;product=internal virion protein A;protein_id=NP_042001.1;transl_table=11;translation=length.138;
NC_001604	GenBank	gene	27307	27723	.	+	1	ID=T7p48.gene;Alias=T7p48;Dbxref=GeneID:1261025;Name=T7p48;Note=gene 13;
NC_001604	GenBank	CDS	27728	28318	.	+	1	ID=T7p49;Dbxref=UniProtKB/Swiss-Prot:P03724,GeneID:1261032;Name=T7p49;Note=Approximately 12 copies of the internal virion protein B encoded in phage T7 by gene 14 are part of the internal core of the T7 virion. Along with gp16 and gp15%2C the other internal core proteins%2C gp14 is ejected from the phage head and forms part of a putative channel that spans the entire host cell envelope and allows entry of DNA. gp14 appears to localize to the outer host membrane after ejection. Other names: gp14;codon_start=1;product=internal virion protein B;protein_id=NP_042002.1;transl_table=11;translation=length.196;
NC_001604	GenBank	gene	27728	28318	.	+	1	ID=T7p49.gene;Alias=T7p49;Dbxref=GeneID:1261032;Name=T7p49;Note=gene 14;
NC_001604	GenBank	CDS	28325	30568	.	+	1	ID=T7p50;Dbxref=UniProtKB/Swiss-Prot:P03725,GeneID:1261034;Name=T7p50;Note=Approximately 12 copies of the internal virion protein C encoded by phage T7 gene 15 (gp15) are part of the internal core of the T7 virion. Along with gp14 and gp16%2C the other internal core proteins%2C gp15 is ejected from the phage head and forms part of a putative channel that spans the entire host cell envelope and allows entry of DNA.;codon_start=1;product=internal virion protein C;protein_id=NP_042003.1;transl_table=11;translation=length.747;
NC_001604	GenBank	gene	28325	30568	.	+	1	ID=T7p50.gene;Alias=T7p50;Dbxref=GeneID:1261034;Name=T7p50;Note=gene 15;
NC_001604	GenBank	CDS	30595	34551	.	+	1	ID=T7p51;Dbxref=GOA:P03726,UniProtKB/Swiss-Prot:P03726,GeneID:1261031;Name=T7p51;Note=Approximately 3 copies of the internal virion protein D encoded by phage T7 gene 16 (gp16) are part of the internal core of the T7 virion. Along with gp14 and gp15%2C the other internal core proteins%2C gp16 is ejected from the phage head and forms part of a putative channel that spans the entire host cell envelope and allows entry of DNA. The N-terminus has similarity to a lytic transglycosylase and may help form a channel for phage DNA translocation through the crosslinked peptidoglycan layer of the host envelope.;codon_start=1;product=internal virion protein D;protein_id=NP_042004.1;transl_table=11;translation=length.1318;
NC_001604	GenBank	regulatory	34566	34566	.	+	1	ID=GenBank:regulatory:NC_001604:34566:34566;Note=T7 promoter phi17;regulatory_class=promoter;
NC_001604	GenBank	gene	30595	34551	.	+	1	ID=T7p51.gene;Alias=T7p51;Dbxref=GeneID:1261031;Name=T7p51;Note=gene 16;
NC_001604	GenBank	CDS	34624	36285	.	+	1	ID=T7p52;Dbxref=UniProtKB/Swiss-Prot:P03748,GeneID:1261023;Name=T7p52;Note=in phages T7 and T3 trimers of gp17 form each of the 6 kinked tail fibers. Other names: gp17.;codon_start=1;product=tail fiber protein;protein_id=NP_042005.1;transl_table=11;translation=length.553;
NC_001604	GenBank	gene	34624	36285	.	+	1	ID=T7p52.gene;Alias=T7p52;Dbxref=GeneID:1261023;Name=T7p52;Note=gene 17;
NC_001604	GenBank	CDS	36344	36547	.	+	1	ID=T7p53;Dbxref=GOA:P03802,UniProtKB/Swiss-Prot:P03802,GeneID:1261022;Name=T7p53;Note=Type II holins have two putative transmembrane domains and are thought to allow endolysins access to the cell wall at the optimal lysis time. However%2C in phage T7 the holin protein gp17.5 does not appear to be essential and gp17.5 mutants only show a minor delay in lysis. Other names: gp17.5%3B lysis protein;codon_start=1;product=type II holin;protein_id=NP_042006.1;transl_table=11;translation=length.67;
NC_001604	GenBank	gene	36344	36547	.	+	1	ID=T7p53.gene;Alias=T7p53;Dbxref=GeneID:1261022;Name=T7p53;Note=gene 17.5;
NC_001604	GenBank	CDS	36553	36822	.	+	1	ID=T7p54;Dbxref=GOA:P03693,UniProtKB/Swiss-Prot:P03693,GeneID:1261042;Name=T7p54;Note=involved in the packaging of genome monomers into a procapsid using head-to-tail concatemers of genomes. other names: DNA packaging protein A%3B DNA maturation protein A%3B terminase%2C small subunit;codon_start=1;product=DNA packaging protein%2C small subunit;protein_id=NP_042007.1;transl_table=11;translation=length.89;
NC_001604	GenBank	regulatory	36836	36836	.	+	1	ID=GenBank:regulatory:NC_001604:36836:36836;Note=E. coli promoter E[6];regulatory_class=promoter;
NC_001604	GenBank	sequence_secondary_structure	36856	36856	.	+	1	ID=GenBank:sequence_secondary_structure:NC_001604:36856:36856;Note=RNase III site R18.5;
NC_001604	GenBank	gene	36553	36822	.	+	1	ID=T7p54.gene;Alias=T7p54;Dbxref=GeneID:1261042;Name=T7p54;Note=gene 18;
NC_001604	GenBank	CDS	36917	37348	.	+	1	ID=T7p55;Dbxref=GOA:P03803,UniProtKB/Swiss-Prot:P03803,GeneID:1261067;Name=T7p55;Note=analog of phage lambda protein Rz%2C a cell lysis protein. Rz and gp18.5 share distant sequence similarity%2C similar function%2C and a similar genome neighborhood. In T7%2C gp18.5 interacts with gp18.7%2C a lambda RZ1-like lysis protein. Other names: gp18.5;codon_start=1;product=phage lambda Rz-like lysis protein;protein_id=NP_042008.1;transl_table=11;translation=length.143;
NC_001604	GenBank	gene	36917	37348	.	+	1	ID=T7p55.gene;Alias=T7p55;Dbxref=GeneID:1261067;Name=T7p55;Note=gene 18.5;
NC_001604	GenBank	CDS	37032	37283	.	+	1	ID=T7p56;Dbxref=UniProtKB/Swiss-Prot:P03788,GeneID:1261057;Name=T7p56;Note=in Enterobacteria phage T7%2C this protein interacts with gp18.5 and is expressed from the -1 frame of a gene completely overlapping gene 18.5. This suggests that it may be an analog of lambda lysis protein Rz1. Other names: gp18.7.;codon_start=1;product=phage lambda Rz1-like protein;protein_id=NP_042009.1;transl_table=11;translation=length.83;
NC_001604	GenBank	gene	37032	37283	.	+	1	ID=T7p56.gene;Alias=T7p56;Dbxref=GeneID:1261057;Name=T7p56;Note=gene 18.7;
NC_001604	GenBank	CDS	37370	39130	.	+	1	ID=T7p57;Dbxref=GOA:P03694,UniProtKB/Swiss-Prot:P03694,GeneID:1261062;Name=T7p57;Note=gene 19;codon_start=1;product=DNA maturation protein;protein_id=NP_042010.1;transl_table=11;translation=length.586;
NC_001604	GenBank	gene	37370	39130	.	+	1	ID=T7p57.gene;Alias=T7p57;Dbxref=GeneID:1261062;Name=T7p57;Note=gene 19;
NC_001604	GenBank	CDS	38016	38273	.	+	1	ID=T7p58;Dbxref=UniProtKB/Swiss-Prot:P03789,GeneID:1261064;Name=T7p58;Note=gene 19.2;codon_start=1;product=hypothetical protein;protein_id=NP_042011.1;transl_table=11;translation=length.85;
NC_001604	GenBank	gene	38016	38273	.	+	1	ID=T7p58.gene;Alias=T7p58;Dbxref=GeneID:1261064;Name=T7p58;Note=gene 19.2;
NC_001604	GenBank	CDS	38553	38726	.	+	1	ID=T7p59;Dbxref=UniProtKB/Swiss-Prot:P03790,GeneID:1261066;Name=T7p59;Note=gene 19.3;codon_start=1;product=hypothetical protein;protein_id=NP_042012.1;transl_table=11;translation=length.57;
NC_001604	GenBank	regulatory	39229	39229	.	+	1	ID=GenBank:regulatory:NC_001604:39229:39229;Note=T7 promoter phiOR;regulatory_class=promoter;
NC_001604	GenBank	gene	38553	38726	.	+	1	ID=T7p59.gene;Alias=T7p59;Dbxref=GeneID:1261066;Name=T7p59;Note=gene 19.3;
NC_001604	GenBank	CDS	39389	39538	.	+	1	ID=T7p60;Dbxref=UniProtKB/Swiss-Prot:P03804,GeneID:1261068;Name=T7p60;Note=gene 19.5;codon_start=1;product=hypothetical protein;protein_id=NP_042013.1;transl_table=11;translation=length.49;
NC_001604	GenBank	gene	39389	39538	.	+	1	ID=T7p60.gene;Alias=T7p60;Dbxref=GeneID:1261068;Name=T7p60;Note=gene 19.5;