Mercurial > repos > cpt > cpt_intersect_adj

annotate test-data/T7_IntersectBOut.gff3 @ 2:0dbc7fbad0ab draft

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planemo upload commit 48284d6c706e2433ccee77dee811bdfd692fb9c9
author cpt
date Mon, 12 Aug 2024 03:04:00 +0000
parents 923d2528480d
children
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923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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1 ##gff-version 3
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
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2 ##sequence-region NC_001604 1 39847
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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3 NC_001604 cpt.fixModel gene 627 824 . - . ID=ORF.0.3363_0.587331907045;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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4 NC_001604 cpt.fixModel mRNA 627 824 . - . ID=ORF.0.3363_0.587331907045.mRNA;Parent=ORF.0.3363_0.587331907045;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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5 NC_001604 getOrfsOrCds CDS 627 824 . - 0 ID=ORF.0.3363_0.587331907045.CDS;Parent=ORF.0.3363_0.587331907045.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
6 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 837 839 . - . ID=ORF.0.3363_0.587331907045.rbs-0;Parent=ORF.0.3363_0.587331907045;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
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7 NC_001604 CPT_LipoRy Lipobox 693 704 . - . ID=ORF.0.3363_0.587331907045.lipobox;Parent=ORF.0.3363_0.587331907045;sequence=FTLC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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8 NC_001604 cpt.fixModel gene 627 734 . - . ID=ORF.0.3367_0.864588620692;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
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9 NC_001604 cpt.fixModel mRNA 627 734 . - . ID=ORF.0.3367_0.864588620692.mRNA;Parent=ORF.0.3367_0.864588620692;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
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10 NC_001604 getOrfsOrCds CDS 627 734 . - 0 ID=ORF.0.3367_0.864588620692.CDS;Parent=ORF.0.3367_0.864588620692.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
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11 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 745 747 . - . ID=ORF.0.3367_0.864588620692.rbs-0;Parent=ORF.0.3367_0.864588620692;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
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12 NC_001604 CPT_LipoRy Lipobox 693 704 . - . ID=ORF.0.3367_0.864588620692.lipobox;Parent=ORF.0.3367_0.864588620692;sequence=FTLC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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13 NC_001604 cpt.fixModel gene 1496 1639 . + . ID=ORF.0.566_0.38534199341;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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14 NC_001604 cpt.fixModel mRNA 1496 1639 . + . ID=ORF.0.566_0.38534199341.mRNA;Parent=ORF.0.566_0.38534199341;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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15 NC_001604 getOrfsOrCds CDS 1496 1639 . + 0 ID=ORF.0.566_0.38534199341.CDS;Parent=ORF.0.566_0.38534199341.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
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16 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 1487 1490 . + . ID=ORF.0.566_0.38534199341.rbs-0;Parent=ORF.0.566_0.38534199341;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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17 NC_001604 CPT_LipoRy Lipobox 1589 1600 . + . ID=ORF.0.566_0.38534199341.lipobox;Parent=ORF.0.566_0.38534199341;sequence=FTAC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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18 NC_001604 cpt.fixModel gene 1502 1639 . + . ID=ORF.0.567_0.804461971525;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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19 NC_001604 cpt.fixModel mRNA 1502 1639 . + . ID=ORF.0.567_0.804461971525.mRNA;Parent=ORF.0.567_0.804461971525;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
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20 NC_001604 getOrfsOrCds CDS 1502 1639 . + 0 ID=ORF.0.567_0.804461971525.CDS;Parent=ORF.0.567_0.804461971525.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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21 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 1487 1490 . + . ID=ORF.0.567_0.804461971525.rbs-0;Parent=ORF.0.567_0.804461971525;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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22 NC_001604 CPT_LipoRy Lipobox 1589 1600 . + . ID=ORF.0.567_0.804461971525.lipobox;Parent=ORF.0.567_0.804461971525;sequence=FTAC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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23 NC_001604 cpt.fixModel gene 1779 1979 . - . ID=ORF.0.3349_0.219533700187;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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24 NC_001604 cpt.fixModel mRNA 1779 1979 . - . ID=ORF.0.3349_0.219533700187.mRNA;Parent=ORF.0.3349_0.219533700187;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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25 NC_001604 getOrfsOrCds CDS 1779 1979 . - 0 ID=ORF.0.3349_0.219533700187.CDS;Parent=ORF.0.3349_0.219533700187.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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26 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 1992 1994 . - . ID=ORF.0.3349_0.219533700187.rbs-0;Parent=ORF.0.3349_0.219533700187;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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27 NC_001604 CPT_LipoRy Lipobox 1896 1907 . - . ID=ORF.0.3349_0.219533700187.lipobox;Parent=ORF.0.3349_0.219533700187;sequence=ALSC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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28 NC_001604 cpt.fixModel gene 1779 2021 . - . ID=ORF.0.3347_0.667378729511;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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29 NC_001604 cpt.fixModel mRNA 1779 2021 . - . ID=ORF.0.3347_0.667378729511.mRNA;Parent=ORF.0.3347_0.667378729511;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
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30 NC_001604 getOrfsOrCds CDS 1779 2021 . - 0 ID=ORF.0.3347_0.667378729511.CDS;Parent=ORF.0.3347_0.667378729511.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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31 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 2030 2032 . - . ID=ORF.0.3347_0.667378729511.rbs-0;Parent=ORF.0.3347_0.667378729511;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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32 NC_001604 CPT_LipoRy Lipobox 1896 1907 . - . ID=ORF.0.3347_0.667378729511.lipobox;Parent=ORF.0.3347_0.667378729511;sequence=ALSC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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33 NC_001604 cpt.fixModel gene 7608 7763 . + . ID=ORF.0.1571_0.432752129598;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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34 NC_001604 cpt.fixModel mRNA 7608 7763 . + . ID=ORF.0.1571_0.432752129598.mRNA;Parent=ORF.0.1571_0.432752129598;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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35 NC_001604 getOrfsOrCds CDS 7608 7763 . + 0 ID=ORF.0.1571_0.432752129598.CDS;Parent=ORF.0.1571_0.432752129598.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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36 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 7596 7600 . + . ID=ORF.0.1571_0.432752129598.rbs-0;Parent=ORF.0.1571_0.432752129598;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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37 NC_001604 CPT_LipoRy Lipobox 7728 7739 . + . ID=ORF.0.1571_0.432752129598.lipobox;Parent=ORF.0.1571_0.432752129598;sequence=VCAC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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38 NC_001604 cpt.fixModel gene 7791 7880 . + . ID=ORF.0.1576_0.12740804191;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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39 NC_001604 cpt.fixModel mRNA 7791 7880 . + . ID=ORF.0.1576_0.12740804191.mRNA;Parent=ORF.0.1576_0.12740804191;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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40 NC_001604 getOrfsOrCds CDS 7791 7880 . + 0 ID=ORF.0.1576_0.12740804191.CDS;Parent=ORF.0.1576_0.12740804191.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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41 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 7777 7783 . + . ID=ORF.0.1576_0.12740804191.rbs-0;Parent=ORF.0.1576_0.12740804191;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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42 NC_001604 CPT_LipoRy Lipobox 7821 7832 . + . ID=ORF.0.1576_0.12740804191.lipobox;Parent=ORF.0.1576_0.12740804191;sequence=IVGC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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43 NC_001604 cpt.fixModel gene 8255 8383 . - . ID=ORF.0.2415_0.910545970566;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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44 NC_001604 cpt.fixModel mRNA 8255 8383 . - . ID=ORF.0.2415_0.910545970566.mRNA;Parent=ORF.0.2415_0.910545970566;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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45 NC_001604 getOrfsOrCds CDS 8255 8383 . - 0 ID=ORF.0.2415_0.910545970566.CDS;Parent=ORF.0.2415_0.910545970566.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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46 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 8395 8398 . - . ID=ORF.0.2415_0.910545970566.rbs-0;Parent=ORF.0.2415_0.910545970566;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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47 NC_001604 CPT_LipoRy Lipobox 8303 8314 . - . ID=ORF.0.2415_0.910545970566.lipobox;Parent=ORF.0.2415_0.910545970566;sequence=IISC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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48 NC_001604 cpt.fixModel gene 12252 13265 . + . ID=ORF.0.1687_0.584434310255;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
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49 NC_001604 cpt.fixModel mRNA 12252 13265 . + . ID=ORF.0.1687_0.584434310255.mRNA;Parent=ORF.0.1687_0.584434310255;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
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50 NC_001604 getOrfsOrCds CDS 12252 13265 . + 0 ID=ORF.0.1687_0.584434310255.CDS;Parent=ORF.0.1687_0.584434310255.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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51 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 12244 12246 . + . ID=ORF.0.1687_0.584434310255.rbs-0;Parent=ORF.0.1687_0.584434310255;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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52 NC_001604 CPT_LipoRy Lipobox 12429 12440 . + . ID=ORF.0.1687_0.584434310255.lipobox;Parent=ORF.0.1687_0.584434310255;sequence=FSGC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
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53 NC_001604 cpt.fixModel gene 12357 13265 . + . ID=ORF.0.1692_0.946746859523;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
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54 NC_001604 cpt.fixModel mRNA 12357 13265 . + . ID=ORF.0.1692_0.946746859523.mRNA;Parent=ORF.0.1692_0.946746859523;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
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55 NC_001604 getOrfsOrCds CDS 12357 13265 . + 0 ID=ORF.0.1692_0.946746859523.CDS;Parent=ORF.0.1692_0.946746859523.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
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56 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 12343 12345 . + . ID=ORF.0.1692_0.946746859523.rbs-0;Parent=ORF.0.1692_0.946746859523;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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57 NC_001604 CPT_LipoRy Lipobox 12429 12440 . + . ID=ORF.0.1692_0.946746859523.lipobox;Parent=ORF.0.1692_0.946746859523;sequence=FSGC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
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58 NC_001604 cpt.fixModel gene 15199 15345 . - . ID=ORF.0.2828_0.260962590428;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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59 NC_001604 cpt.fixModel mRNA 15199 15345 . - . ID=ORF.0.2828_0.260962590428.mRNA;Parent=ORF.0.2828_0.260962590428;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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60 NC_001604 getOrfsOrCds CDS 15199 15345 . - 0 ID=ORF.0.2828_0.260962590428.CDS;Parent=ORF.0.2828_0.260962590428.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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61 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 15356 15359 . - . ID=ORF.0.2828_0.260962590428.rbs-0;Parent=ORF.0.2828_0.260962590428;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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62 NC_001604 CPT_LipoRy Lipobox 15265 15276 . - . ID=ORF.0.2828_0.260962590428.lipobox;Parent=ORF.0.2828_0.260962590428;sequence=FSLC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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63 NC_001604 cpt.fixModel gene 15199 15375 . - . ID=ORF.0.2827_0.307040161403;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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64 NC_001604 cpt.fixModel mRNA 15199 15375 . - . ID=ORF.0.2827_0.307040161403.mRNA;Parent=ORF.0.2827_0.307040161403;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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65 NC_001604 getOrfsOrCds CDS 15199 15375 . - 0 ID=ORF.0.2827_0.307040161403.CDS;Parent=ORF.0.2827_0.307040161403.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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66 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 15388 15390 . - . ID=ORF.0.2827_0.307040161403.rbs-0;Parent=ORF.0.2827_0.307040161403;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
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67 NC_001604 CPT_LipoRy Lipobox 15265 15276 . - . ID=ORF.0.2827_0.307040161403.lipobox;Parent=ORF.0.2827_0.307040161403;sequence=FSLC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
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68 NC_001604 cpt.fixModel gene 17918 18406 . + . ID=ORF.0.808_0.284208778955;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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69 NC_001604 cpt.fixModel mRNA 17918 18406 . + . ID=ORF.0.808_0.284208778955.mRNA;Parent=ORF.0.808_0.284208778955;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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70 NC_001604 getOrfsOrCds CDS 17918 18406 . + 0 ID=ORF.0.808_0.284208778955.CDS;Parent=ORF.0.808_0.284208778955.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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71 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 17905 17908 . + . ID=ORF.0.808_0.284208778955.rbs-0;Parent=ORF.0.808_0.284208778955;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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72 NC_001604 CPT_LipoRy Lipobox 17999 18010 . + . ID=ORF.0.808_0.284208778955.lipobox;Parent=ORF.0.808_0.284208778955;sequence=IPNC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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73 NC_001604 cpt.fixModel gene 18375 18503 . + . ID=ORF.0.1782_0.36618964442;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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74 NC_001604 cpt.fixModel mRNA 18375 18503 . + . ID=ORF.0.1782_0.36618964442.mRNA;Parent=ORF.0.1782_0.36618964442;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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75 NC_001604 getOrfsOrCds CDS 18375 18503 . + 0 ID=ORF.0.1782_0.36618964442.CDS;Parent=ORF.0.1782_0.36618964442.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
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76 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 18362 18364 . + . ID=ORF.0.1782_0.36618964442.rbs-0;Parent=ORF.0.1782_0.36618964442;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
77 NC_001604 CPT_LipoRy Lipobox 18420 18431 . + . ID=ORF.0.1782_0.36618964442.lipobox;Parent=ORF.0.1782_0.36618964442;sequence=GSLC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
78 NC_001604 cpt.fixModel gene 19348 19764 . - . ID=ORF.0.2751_0.199850521186;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
79 NC_001604 cpt.fixModel mRNA 19348 19764 . - . ID=ORF.0.2751_0.199850521186.mRNA;Parent=ORF.0.2751_0.199850521186;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
80 NC_001604 getOrfsOrCds CDS 19348 19764 . - 0 ID=ORF.0.2751_0.199850521186.CDS;Parent=ORF.0.2751_0.199850521186.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
81 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 19770 19772 . - . ID=ORF.0.2751_0.199850521186.rbs-0;Parent=ORF.0.2751_0.199850521186;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
82 NC_001604 CPT_LipoRy Lipobox 19684 19695 . - . ID=ORF.0.2751_0.199850521186.lipobox;Parent=ORF.0.2751_0.199850521186;sequence=AAAC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
83 NC_001604 cpt.fixModel gene 29038 29148 . - . ID=ORF.0.2627_0.865400195799;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
84 NC_001604 cpt.fixModel mRNA 29038 29148 . - . ID=ORF.0.2627_0.865400195799.mRNA;Parent=ORF.0.2627_0.865400195799;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
85 NC_001604 getOrfsOrCds CDS 29038 29148 . - 0 ID=ORF.0.2627_0.865400195799.CDS;Parent=ORF.0.2627_0.865400195799.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
86 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 29157 29159 . - . ID=ORF.0.2627_0.865400195799.rbs-0;Parent=ORF.0.2627_0.865400195799;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
87 NC_001604 CPT_LipoRy Lipobox 29047 29058 . - . ID=ORF.0.2627_0.865400195799.lipobox;Parent=ORF.0.2627_0.865400195799;sequence=LISC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
88 NC_001604 cpt.fixModel gene 37032 37283 . + . ID=ORF.0.1961_0.261039005028;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
89 NC_001604 cpt.fixModel mRNA 37032 37283 . + . ID=ORF.0.1961_0.261039005028.mRNA;Parent=ORF.0.1961_0.261039005028;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
90 NC_001604 getOrfsOrCds CDS 37032 37283 . + 0 ID=ORF.0.1961_0.261039005028.CDS;Parent=ORF.0.1961_0.261039005028.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
91 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 37020 37026 . + . ID=ORF.0.1961_0.261039005028.rbs-0;Parent=ORF.0.1961_0.261039005028;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
92 NC_001604 CPT_LipoRy Lipobox 37167 37178 . + . ID=ORF.0.1961_0.261039005028.lipobox;Parent=ORF.0.1961_0.261039005028;sequence=ISGC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
93 NC_001604 cpt.fixModel gene 37083 37283 . + . ID=ORF.0.1964_0.894779255809;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
94 NC_001604 cpt.fixModel mRNA 37083 37283 . + . ID=ORF.0.1964_0.894779255809.mRNA;Parent=ORF.0.1964_0.894779255809;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
95 NC_001604 getOrfsOrCds CDS 37083 37283 . + 0 ID=ORF.0.1964_0.894779255809.CDS;Parent=ORF.0.1964_0.894779255809.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
96 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 37074 37076 . + . ID=ORF.0.1964_0.894779255809.rbs-0;Parent=ORF.0.1964_0.894779255809;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
97 NC_001604 CPT_LipoRy Lipobox 37167 37178 . + . ID=ORF.0.1964_0.894779255809.lipobox;Parent=ORF.0.1964_0.894779255809;sequence=ISGC;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
98 NC_001604 cpt.fixModel gene 39389 39538 . + . ID=ORF.0.1414_0.296990322019;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
99 NC_001604 cpt.fixModel mRNA 39389 39538 . + . ID=ORF.0.1414_0.296990322019.mRNA;Parent=ORF.0.1414_0.296990322019;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
100 NC_001604 getOrfsOrCds CDS 39389 39538 . + 0 ID=ORF.0.1414_0.296990322019.CDS;Parent=ORF.0.1414_0.296990322019.mRNA;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
101 NC_001604 CPT_ShineFind Shine_Dalgarno_sequence 39378 39382 . + . ID=ORF.0.1414_0.296990322019.rbs-0;Parent=ORF.0.1414_0.296990322019;
923d2528480d planemo upload commit 8500f316f8325380aa5d0000fbd13dd96012b1bb
cpt
parents:
diff changeset
102 NC_001604 CPT_LipoRy Lipobox 39443 39454 . + . ID=ORF.0.1414_0.296990322019.lipobox;Parent=ORF.0.1414_0.296990322019;sequence=VVLC;